RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 Q8N3U1 123 aa4.61□□□□□ -1.67
USP16-203ENST00000399975 KRTAP3-3Q9BYR6 98 aa4.61□□□□□ -1.67
USP16-203ENST00000399975 KRTAP3-2Q9BYR7 98 aa4.61□□□□□ -1.67
USP16-203ENST00000399975 STAB2Q8WWQ8 2551 aa4.61□□□□□ -1.67
USP16-203ENST00000399975 TRAV8-3A0A0A6YYJ7 113 aa4.6□□□□□ -1.67
USP16-203ENST00000399975 A0A0B4J2C4 111 aa4.6□□□□□ -1.67
USP16-203ENST00000399975 LINC00242Q5T6M2 205 aa4.6□□□□□ -1.67
USP16-203ENST00000399975 LINC00476Q8WZB0 136 aa4.6□□□□□ -1.67
USP16-203ENST00000399975 RPL13AP40429 203 aaKnown RBP4.6□□□□□ -1.67
USP16-203ENST00000399975 CARD19Q96LW7 228 aa4.6□□□□□ -1.67
USP16-203ENST00000399975 KLK12Q9UKR0 248 aa4.6□□□□□ -1.67
USP16-203ENST00000399975 ERG28Q9UKR5 140 aa4.6□□□□□ -1.67
USP16-203ENST00000399975 NBDYA0A0U1RRE5 68 aa4.59□□□□□ -1.67
USP16-203ENST00000399975 ZNF815PA8K554 130 aa4.59□□□□□ -1.67
USP16-203ENST00000399975 CD164L2Q6UWJ8 174 aa4.59□□□□□ -1.67
USP16-203ENST00000399975 Q6ZR54 194 aa4.59□□□□□ -1.67
USP16-203ENST00000399975 RMI2Q96E14 147 aa4.59□□□□□ -1.67
USP16-203ENST00000399975 IGHV3OR16-9A0A0B4J2B5 98 aa4.59□□□□□ -1.68
USP16-203ENST00000399975 A0A0J9YXV3 536 aa4.59□□□□□ -1.68
USP16-203ENST00000399975 CRPP02741 224 aa4.59□□□□□ -1.68
USP16-203ENST00000399975 CFC1BP0CG36 223 aa4.59□□□□□ -1.68
USP16-203ENST00000399975 CFC1P0CG37 223 aa4.59□□□□□ -1.68
USP16-203ENST00000399975 ZNF22P17026 224 aaPredicted RBP4.59□□□□□ -1.68
USP16-203ENST00000399975 RNASE13Q5GAN3 156 aaKnown RBP4.59□□□□□ -1.68
USP16-203ENST00000399975 GEMIN7Q9H840 131 aaKnown RBP4.59□□□□□ -1.68
USP16-203ENST00000399975 PRO1854Q9UHT4 67 aa4.59□□□□□ -1.68
USP16-203ENST00000399975 A0A087WZ39 114 aa4.58□□□□□ -1.68
USP16-203ENST00000399975 SPINK8P0C7L1 97 aa4.58□□□□□ -1.68
USP16-203ENST00000399975 CHCHD10Q8WYQ3 142 aaPredicted RBP4.58□□□□□ -1.68
USP16-203ENST00000399975 TMEM223A0PJW6 202 aa4.58□□□□□ -1.68
USP16-203ENST00000399975 LEPROTO15243 131 aa4.58□□□□□ -1.68
USP16-203ENST00000399975 COX6A2Q02221 97 aa4.58□□□□□ -1.68
USP16-203ENST00000399975 SPANXDQ9BXN6 97 aa4.58□□□□□ -1.68
USP16-203ENST00000399975 KRTAP1-5Q9BYS1 174 aa4.58□□□□□ -1.68
USP16-203ENST00000399975 PPDPFQ9H3Y8 114 aa4.58□□□□□ -1.68
USP16-203ENST00000399975 TRAV13-1A0A0B4J241 112 aa4.57□□□□□ -1.68
USP16-203ENST00000399975 TCL1BO95988 128 aa4.57□□□□□ -1.68
USP16-203ENST00000399975 XGP55808 180 aa4.57□□□□□ -1.68
USP16-203ENST00000399975 UBE2WQ96B02 151 aa4.57□□□□□ -1.68
USP16-203ENST00000399975 PLEKHB2Q96CS7 222 aa4.57□□□□□ -1.68
USP16-203ENST00000399975 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.57□□□□□ -1.68
USP16-203ENST00000399975 IGLV5-39A0A0G2JS06 123 aa4.57□□□□□ -1.68
USP16-203ENST00000399975 TRBV30A0A0K0K1B3 111 aa4.57□□□□□ -1.68
USP16-203ENST00000399975 FAM240AA0A1B0GVK7 77 aa4.57□□□□□ -1.68
USP16-203ENST00000399975 LYSTQ99698 3801 aa4.57□□□□□ -1.68
USP16-203ENST00000399975 F8WDY8 70 aa4.56□□□□□ -1.68
USP16-203ENST00000399975 SRSF9Q13242 221 aaKnown RBP eCLIP4.56□□□□□ -1.68
USP16-203ENST00000399975 LCE6AA0A183 80 aa4.56□□□□□ -1.68
USP16-203ENST00000399975 SCGB1D4Q6XE38 83 aa4.56□□□□□ -1.68
USP16-203ENST00000399975 C1orf43Q9BWL3 253 aa4.56□□□□□ -1.68
USP16-203ENST00000399975 J3QQQ9 107 aa4.56□□□□□ -1.68
USP16-203ENST00000399975 COX7A2LO14548 114 aa4.56□□□□□ -1.68
USP16-203ENST00000399975 MT-ATP8P03928 68 aa4.56□□□□□ -1.68
USP16-203ENST00000399975 PSMB2P49721 201 aa4.56□□□□□ -1.68
USP16-203ENST00000399975 Q6ZRN7 208 aaPredicted RBP4.56□□□□□ -1.68
USP16-203ENST00000399975 CDKN2A-AS1Q9UH64 79 aa4.56□□□□□ -1.68
USP16-203ENST00000399975 IGHV3-64A0A075B6Q5 118 aa4.55□□□□□ -1.68
USP16-203ENST00000399975 IGHV1-58A0A0C4DH39 117 aa4.55□□□□□ -1.68
USP16-203ENST00000399975 SMIM1B2RUZ4 78 aa4.55□□□□□ -1.68
USP16-203ENST00000399975 SCGB1C2P0DMR2 95 aa4.55□□□□□ -1.68
USP16-203ENST00000399975 CLPSL2Q6UWE3 100 aa4.55□□□□□ -1.68
USP16-203ENST00000399975 TIMM17BO60830 172 aa4.55□□□□□ -1.68
USP16-203ENST00000399975 TSPEAR-AS2P59090 65 aa4.55□□□□□ -1.68
USP16-203ENST00000399975 SPANXCQ9NY87 97 aa4.55□□□□□ -1.68
USP16-203ENST00000399975 A0A0J9YXY3 114 aa4.54□□□□□ -1.68
USP16-203ENST00000399975 SLC25A20O43772 301 aa4.54□□□□□ -1.68
USP16-203ENST00000399975 LY6G6CO95867 125 aa4.54□□□□□ -1.68
USP16-203ENST00000399975 XCL1P47992 114 aa4.54□□□□□ -1.68
USP16-203ENST00000399975 TMEM170BQ5T4T1 132 aa4.54□□□□□ -1.68
USP16-203ENST00000399975 ANKRD29Q8N6D5 301 aa4.54□□□□□ -1.68
USP16-203ENST00000399975 IGKV3OR2-268A0A0C4DH90 116 aa4.54□□□□□ -1.68
USP16-203ENST00000399975 EIF4EBP3O60516 100 aaPredicted RBP4.54□□□□□ -1.68
USP16-203ENST00000399975 CFAP161Q6P656 301 aa4.54□□□□□ -1.68
USP16-203ENST00000399975 SFTA2Q6UW10 78 aa4.54□□□□□ -1.68
USP16-203ENST00000399975 Q8IZM0 81 aa4.54□□□□□ -1.68
USP16-203ENST00000399975 C6orf223Q8N319 242 aa4.54□□□□□ -1.68
USP16-203ENST00000399975 IGKV2D-24A0A075B6R9 120 aa4.53□□□□□ -1.68
USP16-203ENST00000399975 GVQW2A0A096LPI5 108 aaPredicted RBP4.53□□□□□ -1.68
USP16-203ENST00000399975 LOC107984156A0A0G2JMH3 177 aa4.53□□□□□ -1.68
USP16-203ENST00000399975 TRBV10-2A0A0K0K1G8 114 aa4.53□□□□□ -1.68
USP16-203ENST00000399975 H3BT86 120 aa4.53□□□□□ -1.68
USP16-203ENST00000399975 ATXN8Q156A1 80 aa4.53□□□□□ -1.68
USP16-203ENST00000399975 ARL17AQ8IVW1 177 aa4.53□□□□□ -1.68
USP16-203ENST00000399975 LITAFQ99732 161 aa4.53□□□□□ -1.68
USP16-203ENST00000399975 IGLV10-54A0A075B6I4 117 aa4.53□□□□□ -1.68
USP16-203ENST00000399975 LGALS3P17931 250 aaKnown RBP4.53□□□□□ -1.68
USP16-203ENST00000399975 KIAA0087Q14695 138 aa4.53□□□□□ -1.68
USP16-203ENST00000399975 C15orf56Q8N910 161 aa4.53□□□□□ -1.68
USP16-203ENST00000399975 C2orf48Q96LS8 159 aa4.53□□□□□ -1.68
USP16-203ENST00000399975 A4D1N5 150 aa4.52□□□□□ -1.69
USP16-203ENST00000399975 IFITM1P13164 125 aa4.52□□□□□ -1.69
USP16-203ENST00000399975 CXCL5P42830 114 aa4.52□□□□□ -1.69
USP16-203ENST00000399975 LINC01620Q4KN68 170 aa4.52□□□□□ -1.69
USP16-203ENST00000399975 C5orf38Q86SI9 138 aa4.52□□□□□ -1.69
USP16-203ENST00000399975 Q9HAA7 133 aa4.52□□□□□ -1.69
USP16-203ENST00000399975 MALP21145 153 aa4.52□□□□□ -1.69
USP16-203ENST00000399975 C1orf134Q5TEV5 83 aa4.52□□□□□ -1.69
USP16-203ENST00000399975 COX7B2Q8TF08 81 aa4.52□□□□□ -1.69
USP16-203ENST00000399975 IMUPQ9GZP8 106 aa4.52□□□□□ -1.69
USP16-203ENST00000399975 DNAH2Q9P225 4427 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms