RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 Q8NAQ8 132 aa5.54□□□□□ -1.52
USP47-203ENST00000399455 Q6ZSN1 163 aa5.54□□□□□ -1.52
USP47-203ENST00000399455 PTPN13Q12923 2485 aa5.54□□□□□ -1.52
USP47-203ENST00000399455 ARHGAP32A7KAX9 2087 aa5.54□□□□□ -1.52
USP47-203ENST00000399455 SMCR5Q8TEV8 140 aa5.54□□□□□ -1.52
USP47-203ENST00000399455 Q8N814 137 aa5.54□□□□□ -1.52
USP47-203ENST00000399455 AMELXQ99217 191 aa5.54□□□□□ -1.52
USP47-203ENST00000399455 KRTAP10-11P60412 298 aa5.53□□□□□ -1.52
USP47-203ENST00000399455 PLCE1Q9P212 2302 aa5.53□□□□□ -1.52
USP47-203ENST00000399455 PRLHP81277 87 aa5.53□□□□□ -1.52
USP47-203ENST00000399455 SPACA4Q8TDM5 124 aa5.52□□□□□ -1.53
USP47-203ENST00000399455 TNCP24821 2201 aa5.52□□□□□ -1.53
USP47-203ENST00000399455 ATP5EP56381 51 aaPredicted RBP5.51□□□□□ -1.53
USP47-203ENST00000399455 ACACBO00763 2458 aa5.51□□□□□ -1.53
USP47-203ENST00000399455 MAPKAPK5-AS1Q8N8E1 139 aa5.51□□□□□ -1.53
USP47-203ENST00000399455 NAV3Q8IVL0 2385 aa5.51□□□□□ -1.53
USP47-203ENST00000399455 SDIM1Q6ZPB5 146 aa5.51□□□□□ -1.53
USP47-203ENST00000399455 RETNLBQ9BQ08 111 aa5.51□□□□□ -1.53
USP47-203ENST00000399455 V9GYY9 64 aa5.51□□□□□ -1.53
USP47-203ENST00000399455 DNAH10OSP0CZ25 163 aa5.51□□□□□ -1.53
USP47-203ENST00000399455 WFDC2Q14508 124 aa5.51□□□□□ -1.53
USP47-203ENST00000399455 Q8NBF4 154 aa5.51□□□□□ -1.53
USP47-203ENST00000399455 C19orf73Q9NVV2 129 aa5.5□□□□□ -1.53
USP47-203ENST00000399455 MED13LQ71F56 2210 aa5.5□□□□□ -1.53
USP47-203ENST00000399455 NDUFC1O43677 76 aa5.5□□□□□ -1.53
USP47-203ENST00000399455 MOBPQ13875 183 aa5.5□□□□□ -1.53
USP47-203ENST00000399455 WNK1Q9H4A3 2382 aa5.5□□□□□ -1.53
USP47-203ENST00000399455 BDP1A6H8Y1 2624 aa5.5□□□□□ -1.53
USP47-203ENST00000399455 PRR14LQ5THK1 2151 aa5.49□□□□□ -1.53
USP47-203ENST00000399455 PRR4Q16378 134 aa5.49□□□□□ -1.53
USP47-203ENST00000399455 FAM19A4Q96LR4 140 aa5.49□□□□□ -1.53
USP47-203ENST00000399455 NTM-AS1Q6ZSK4 140 aa5.49□□□□□ -1.53
USP47-203ENST00000399455 AGRNO00468 2067 aa5.49□□□□□ -1.53
USP47-203ENST00000399455 FAM30AQ9NZY2 134 aa5.48□□□□□ -1.53
USP47-203ENST00000399455 ATP11AUNQ6ZP68 121 aa5.48□□□□□ -1.53
USP47-203ENST00000399455 GVQW2A0A096LPI5 108 aaPredicted RBP5.48□□□□□ -1.53
USP47-203ENST00000399455 PHF5AQ7RTV0 110 aaKnown RBP5.47□□□□□ -1.53
USP47-203ENST00000399455 TM2D3Q9BRN9 247 aa5.47□□□□□ -1.53
USP47-203ENST00000399455 BCE1O60756 84 aa5.47□□□□□ -1.53
USP47-203ENST00000399455 NOTCH3Q9UM47 2321 aa5.47□□□□□ -1.53
USP47-203ENST00000399455 C20orf197Q8N268 126 aa5.47□□□□□ -1.53
USP47-203ENST00000399455 COX6B2Q6YFQ2 88 aa5.47□□□□□ -1.53
USP47-203ENST00000399455 LINC00167Q96N53 147 aa5.47□□□□□ -1.53
USP47-203ENST00000399455 GAS8-AS1O95177 125 aa5.46□□□□□ -1.53
USP47-203ENST00000399455 PRR3P79522 188 aaKnown RBP5.46□□□□□ -1.53
USP47-203ENST00000399455 SERP2Q8N6R1 65 aa5.46□□□□□ -1.53
USP47-203ENST00000399455 A0A087WSZ3 146 aa5.46□□□□□ -1.54
USP47-203ENST00000399455 TRBV7-6A0A0J9YX20 115 aa5.46□□□□□ -1.54
USP47-203ENST00000399455 HIVEP3Q5T1R4 2406 aa5.46□□□□□ -1.54
USP47-203ENST00000399455 A0A096LNT2 108 aa5.45□□□□□ -1.54
USP47-203ENST00000399455 CHTF8P0CG12 524 aa5.45□□□□□ -1.54
USP47-203ENST00000399455 SPAG11AQ6PDA7 123 aa5.45□□□□□ -1.54
USP47-203ENST00000399455 PIEZO1Q92508 2521 aa5.45□□□□□ -1.54
USP47-203ENST00000399455 NAV2Q8IVL1 2488 aa5.45□□□□□ -1.54
USP47-203ENST00000399455 LINC00575Q6W349 94 aa5.45□□□□□ -1.54
USP47-203ENST00000399455 C6orf48Q9UBA6 75 aa5.44□□□□□ -1.54
USP47-203ENST00000399455 EPM2AB3EWF7 344 aa5.43□□□□□ -1.54
USP47-203ENST00000399455 A0A087WYN8 130 aa5.43□□□□□ -1.54
USP47-203ENST00000399455 LINC00313P59037 77 aa5.43□□□□□ -1.54
USP47-203ENST00000399455 KRTAP10-3P60369 221 aa5.43□□□□□ -1.54
USP47-203ENST00000399455 C7orf65Q6ZTY9 151 aa5.43□□□□□ -1.54
USP47-203ENST00000399455 hDV103S1A0JD37 113 aa5.42□□□□□ -1.54
USP47-203ENST00000399455 HCG22E2RYF7 251 aa5.42□□□□□ -1.54
USP47-203ENST00000399455 LINC01547P58512 204 aaPredicted RBP5.42□□□□□ -1.54
USP47-203ENST00000399455 KLK9Q2XQG4 91 aa5.42□□□□□ -1.54
USP47-203ENST00000399455 LINC00304Q8N9R0 145 aa5.41□□□□□ -1.54
USP47-203ENST00000399455 IMUPQ9GZP8 106 aa5.41□□□□□ -1.54
USP47-203ENST00000399455 IGKV2D-30A0A075B6S6 120 aa5.41□□□□□ -1.54
USP47-203ENST00000399455 IGKV2-30P06310 120 aa5.41□□□□□ -1.54
USP47-203ENST00000399455 A0A087WTM6 91 aa5.41□□□□□ -1.54
USP47-203ENST00000399455 UQCRQO14949 82 aa5.4□□□□□ -1.54
USP47-203ENST00000399455 NCOR2Q9Y618 2525 aa5.4□□□□□ -1.54
USP47-203ENST00000399455 KRTAP1-3Q8IUG1 177 aa5.4□□□□□ -1.54
USP47-203ENST00000399455 TP53AIP1Q9HCN2 124 aa5.4□□□□□ -1.54
USP47-203ENST00000399455 H0Y9P7 68 aa5.4□□□□□ -1.54
USP47-203ENST00000399455 CSPG4Q6UVK1 2322 aa5.4□□□□□ -1.55
USP47-203ENST00000399455 IGF2RP11717 2491 aa5.4□□□□□ -1.55
USP47-203ENST00000399455 DSCAML1Q8TD84 2053 aa5.4□□□□□ -1.55
USP47-203ENST00000399455 KIAA0087Q14695 138 aa5.39□□□□□ -1.55
USP47-203ENST00000399455 CDIP1Q9H305 208 aa5.39□□□□□ -1.55
USP47-203ENST00000399455 A0A1B0GW54 56 aa5.39□□□□□ -1.55
USP47-203ENST00000399455 BRK1Q8WUW1 75 aa5.39□□□□□ -1.55
USP47-203ENST00000399455 IGHV3OR16-9A0A0B4J2B5 98 aa5.39□□□□□ -1.55
USP47-203ENST00000399455 APLNQ9ULZ1 77 aa5.39□□□□□ -1.55
USP47-203ENST00000399455 IGLV5-39A0A0G2JS06 123 aa5.39□□□□□ -1.55
USP47-203ENST00000399455 LINC00208Q96KT6 92 aa5.39□□□□□ -1.55
USP47-203ENST00000399455 Q96NJ1 140 aa5.38□□□□□ -1.55
USP47-203ENST00000399455 NOTCH2Q04721 2471 aa5.38□□□□□ -1.55
USP47-203ENST00000399455 SPINK1P00995 79 aa5.38□□□□□ -1.55
USP47-203ENST00000399455 Q6ZRX8 168 aa5.38□□□□□ -1.55
USP47-203ENST00000399455 TSPEAR-AS2P59090 65 aa5.38□□□□□ -1.55
USP47-203ENST00000399455 ADAMTSL4-AS1Q5T5F5 129 aa5.38□□□□□ -1.55
USP47-203ENST00000399455 ATRXP46100 2492 aa5.38□□□□□ -1.55
USP47-203ENST00000399455 SPG11Q96JI7 2443 aa5.38□□□□□ -1.55
USP47-203ENST00000399455 PLXNB1O43157 2135 aa5.37□□□□□ -1.55
USP47-203ENST00000399455 LINC01546A6NGU7 62 aa5.37□□□□□ -1.55
USP47-203ENST00000399455 C8orf87E5RJ46 101 aa5.37□□□□□ -1.55
USP47-203ENST00000399455 ELOF1P60002 83 aaKnown RBP5.37□□□□□ -1.55
USP47-203ENST00000399455 CSNK1G2-AS1Q8NCQ2 148 aa5.37□□□□□ -1.55
USP47-203ENST00000399455 SORL1Q92673 2214 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms