RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 POLR3KQ9Y2Y1 108 aaPredicted RBP3.67□□□□□ -1.82
TTC3-204ENST00000399017 WFDC10AQ9H1F0 79 aa3.67□□□□□ -1.82
TTC3-204ENST00000399017 NDUFV3P56181 108 aaKnown RBP3.67□□□□□ -1.82
TTC3-204ENST00000399017 PMAIP1Q13794 54 aa3.67□□□□□ -1.82
TTC3-204ENST00000399017 Q6ZTC4 211 aa3.67□□□□□ -1.82
TTC3-204ENST00000399017 COL4A1P02462 1669 aa3.67□□□□□ -1.82
TTC3-204ENST00000399017 TRBV6-5A0A0K0K1A5 114 aa3.66□□□□□ -1.82
TTC3-204ENST00000399017 C19orf84I3L1E1 186 aa3.66□□□□□ -1.82
TTC3-204ENST00000399017 SMR3AQ99954 134 aa3.66□□□□□ -1.82
TTC3-204ENST00000399017 EPM2AB3EWF7 344 aa3.66□□□□□ -1.82
TTC3-204ENST00000399017 RPL37AP61513 92 aaKnown RBP3.66□□□□□ -1.82
TTC3-204ENST00000399017 CLEC2BQ92478 149 aa3.66□□□□□ -1.82
TTC3-204ENST00000399017 H3BNG1 76 aa3.66□□□□□ -1.82
TTC3-204ENST00000399017 Q9BRP9 147 aa3.66□□□□□ -1.82
TTC3-204ENST00000399017 A0A1B0GUV1 79 aa3.66□□□□□ -1.82
TTC3-204ENST00000399017 ZNF503-AS2A6NEH8 195 aa3.66□□□□□ -1.82
TTC3-204ENST00000399017 SPACA4Q8TDM5 124 aa3.66□□□□□ -1.82
TTC3-204ENST00000399017 EBI3Q14213 229 aa3.66□□□□□ -1.82
TTC3-204ENST00000399017 LINC00574Q9H8X3 128 aa3.66□□□□□ -1.82
TTC3-204ENST00000399017 UQCRQO14949 82 aa3.66□□□□□ -1.82
TTC3-204ENST00000399017 LINC00173Q6ZV60 143 aa3.66□□□□□ -1.82
TTC3-204ENST00000399017 SBSPONQ8IVN8 264 aa3.66□□□□□ -1.82
TTC3-204ENST00000399017 COL4A3Q01955 1670 aa3.65□□□□□ -1.82
TTC3-204ENST00000399017 LINC00959A0A1B0GUT2 108 aa3.65□□□□□ -1.82
TTC3-204ENST00000399017 A0A1B0GW54 56 aa3.65□□□□□ -1.83
TTC3-204ENST00000399017 CYSRT1A8MQ03 144 aa3.65□□□□□ -1.83
TTC3-204ENST00000399017 LINC01547P58512 204 aaPredicted RBP3.65□□□□□ -1.83
TTC3-204ENST00000399017 COX6A2Q02221 97 aa3.65□□□□□ -1.83
TTC3-204ENST00000399017 LINC01561Q8N1V8 128 aa3.65□□□□□ -1.83
TTC3-204ENST00000399017 TRBV27A0A0K0K1C4 114 aa3.65□□□□□ -1.83
TTC3-204ENST00000399017 SNURFQ9Y675 71 aa3.65□□□□□ -1.83
TTC3-204ENST00000399017 KIF25-AS1Q9Y6Z4 181 aa3.65□□□□□ -1.83
TTC3-204ENST00000399017 ZNF580Q9UK33 172 aa3.64□□□□□ -1.83
TTC3-204ENST00000399017 MSMPQ1L6U9 139 aa3.64□□□□□ -1.83
TTC3-204ENST00000399017 Q6ZSN1 163 aa3.64□□□□□ -1.83
TTC3-204ENST00000399017 LINC00308Q8TCZ7 52 aa3.64□□□□□ -1.83
TTC3-204ENST00000399017 YPEL4Q96NS1 127 aa3.64□□□□□ -1.83
TTC3-204ENST00000399017 DNAH12Q6ZR08 3092 aa3.64□□□□□ -1.83
TTC3-204ENST00000399017 IGKV2D-30A0A075B6S6 120 aa3.64□□□□□ -1.83
TTC3-204ENST00000399017 IGKV2-30P06310 120 aa3.64□□□□□ -1.83
TTC3-204ENST00000399017 M0QY20 66 aa3.63□□□□□ -1.83
TTC3-204ENST00000399017 C5orf42Q9H799 3197 aa3.63□□□□□ -1.83
TTC3-204ENST00000399017 KRTAP27-1Q3LI81 207 aa3.63□□□□□ -1.83
TTC3-204ENST00000399017 WFDC13Q8IUB5 93 aa3.63□□□□□ -1.83
TTC3-204ENST00000399017 XIRP2A4UGR9 3374 aa3.63□□□□□ -1.83
TTC3-204ENST00000399017 ATRQ13535 2644 aa3.63□□□□□ -1.83
TTC3-204ENST00000399017 H3BS24 57 aa3.63□□□□□ -1.83
TTC3-204ENST00000399017 K7ERJ3 54 aa3.63□□□□□ -1.83
TTC3-204ENST00000399017 BRWD1-AS2P59051 145 aa3.63□□□□□ -1.83
TTC3-204ENST00000399017 IGLV4-3A0A075B6K6 122 aa3.63□□□□□ -1.83
TTC3-204ENST00000399017 ENHOQ6UWT2 76 aa3.63□□□□□ -1.83
TTC3-204ENST00000399017 Q6ZQY7 126 aa3.63□□□□□ -1.83
TTC3-204ENST00000399017 PRLHP81277 87 aa3.63□□□□□ -1.83
TTC3-204ENST00000399017 RETNLBQ9BQ08 111 aa3.63□□□□□ -1.83
TTC3-204ENST00000399017 CDKN2A-AS1Q9UH64 79 aa3.63□□□□□ -1.83
TTC3-204ENST00000399017 IGLV1-40P01703 118 aa3.62□□□□□ -1.83
TTC3-204ENST00000399017 BRI3O95415 125 aa3.62□□□□□ -1.83
TTC3-204ENST00000399017 REV3LO60673 3130 aa3.62□□□□□ -1.83
TTC3-204ENST00000399017 FLNBO75369 2602 aaKnown RBP3.62□□□□□ -1.83
TTC3-204ENST00000399017 TP53TG3Q9ULZ0 132 aa3.62□□□□□ -1.83
TTC3-204ENST00000399017 SPINT4Q6UDR6 99 aa3.62□□□□□ -1.83
TTC3-204ENST00000399017 BAHCC1Q9P281 2608 aa3.61□□□□□ -1.83
TTC3-204ENST00000399017 COLCA2A8K830 154 aa3.61□□□□□ -1.83
TTC3-204ENST00000399017 SPINK1P00995 79 aa3.61□□□□□ -1.83
TTC3-204ENST00000399017 ADCYAP1P18509 176 aa3.61□□□□□ -1.83
TTC3-204ENST00000399017 FAM167A-AS1Q96KT0 104 aa3.61□□□□□ -1.83
TTC3-204ENST00000399017 A0A1B0GU69 56 aa3.61□□□□□ -1.83
TTC3-204ENST00000399017 CDC42SE2Q9NRR3 84 aa3.61□□□□□ -1.83
TTC3-204ENST00000399017 LINC00846Q9NV44 126 aa3.61□□□□□ -1.83
TTC3-204ENST00000399017 A8MZ25 164 aa3.61□□□□□ -1.83
TTC3-204ENST00000399017 H0Y9P7 68 aa3.61□□□□□ -1.83
TTC3-204ENST00000399017 RNASE3P12724 160 aaKnown RBP3.61□□□□□ -1.83
TTC3-204ENST00000399017 LINC00208Q96KT6 92 aa3.61□□□□□ -1.83
TTC3-204ENST00000399017 RSPO1Q2MKA7 263 aaPredicted RBP3.6□□□□□ -1.83
TTC3-204ENST00000399017 Q5VSD8 79 aa3.6□□□□□ -1.83
TTC3-204ENST00000399017 LYPD5Q6UWN5 251 aa3.6□□□□□ -1.83
TTC3-204ENST00000399017 HELZ2Q9BYK8 2649 aaKnown RBP3.6□□□□□ -1.83
TTC3-204ENST00000399017 RTL8CO15255 209 aa3.6□□□□□ -1.83
TTC3-204ENST00000399017 MOBPQ13875 183 aa3.6□□□□□ -1.83
TTC3-204ENST00000399017 SPRNQ5BIV9 151 aa3.6□□□□□ -1.83
TTC3-204ENST00000399017 PSORS1C2Q9UIG4 136 aa3.6□□□□□ -1.83
TTC3-204ENST00000399017 MGAM2Q2M2H8 2515 aa3.6□□□□□ -1.83
TTC3-204ENST00000399017 KLLNB2CW77 178 aa3.6□□□□□ -1.83
TTC3-204ENST00000399017 ZNF22P17026 224 aaPredicted RBP3.6□□□□□ -1.83
TTC3-204ENST00000399017 NBDYA0A0U1RRE5 68 aa3.59□□□□□ -1.83
TTC3-204ENST00000399017 PROK1P58294 105 aa3.59□□□□□ -1.83
TTC3-204ENST00000399017 SMIM11BQ8TCY0 68 aa3.59□□□□□ -1.83
TTC3-204ENST00000399017 C9orf163Q8N9P6 203 aa3.59□□□□□ -1.83
TTC3-204ENST00000399017 GDF5OSQ5U4N7 250 aa3.59□□□□□ -1.83
TTC3-204ENST00000399017 C9orf116Q5BN46 136 aaPredicted RBP3.59□□□□□ -1.84
TTC3-204ENST00000399017 LAMA2P24043 3122 aaKnown RBP3.59□□□□□ -1.84
TTC3-204ENST00000399017 SMIM26A0A096LP01 95 aa3.59□□□□□ -1.84
TTC3-204ENST00000399017 TRAV22A0A0B4J277 110 aa3.59□□□□□ -1.84
TTC3-204ENST00000399017 Q8NBF4 154 aa3.58□□□□□ -1.84
TTC3-204ENST00000399017 C8orf87E5RJ46 101 aa3.58□□□□□ -1.84
TTC3-204ENST00000399017 NTM-AS1Q6ZSK4 140 aa3.58□□□□□ -1.84
TTC3-204ENST00000399017 HCG22E2RYF7 251 aa3.57□□□□□ -1.84
TTC3-204ENST00000399017 IGLV4-60A0A075B6I1 120 aa3.57□□□□□ -1.84
TTC3-204ENST00000399017 SCXQ7RTU7 201 aa3.57□□□□□ -1.84
TTC3-204ENST00000399017 TRAV7A0A075B6U4 112 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms