RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 IGLC3P0DOY3 106 aa9.01□□□□□ -0.97
HDDC2-202ENST00000398153 KRTAP10-4P60372 401 aaPredicted RBP9.01□□□□□ -0.97
HDDC2-202ENST00000398153 GAGE2BQ13066 116 aa9.01□□□□□ -0.97
HDDC2-202ENST00000398153 PMCHL1Q16048 86 aa9.01□□□□□ -0.97
HDDC2-202ENST00000398153 C10orf25Q5T742 122 aa9.01□□□□□ -0.97
HDDC2-202ENST00000398153 BAGE3Q86Y29 109 aa9.01□□□□□ -0.97
HDDC2-202ENST00000398153 C6orf48Q9UBA6 75 aa9.01□□□□□ -0.97
HDDC2-202ENST00000398153 SMIM1B2RUZ4 78 aa9□□□□□ -0.97
HDDC2-202ENST00000398153 HSBP1O75506 76 aa9□□□□□ -0.97
HDDC2-202ENST00000398153 RPL18AQ02543 176 aaKnown RBP9□□□□□ -0.97
HDDC2-202ENST00000398153 TOMM7Q9P0U1 55 aa9□□□□□ -0.97
HDDC2-202ENST00000398153 NDUFA6P56556 154 aa8.99□□□□□ -0.97
HDDC2-202ENST00000398153 C2orf82Q6UX34 121 aa8.99□□□□□ -0.97
HDDC2-202ENST00000398153 TRAV12-1A0A0B4J245 112 aa8.98□□□□□ -0.97
HDDC2-202ENST00000398153 NDUFC2-KCTD14E9PQ53 114 aa8.98□□□□□ -0.97
HDDC2-202ENST00000398153 F8VRH5 84 aa8.98□□□□□ -0.97
HDDC2-202ENST00000398153 Q6ZRP5 223 aa8.97□□□□□ -0.97
HDDC2-202ENST00000398153 COX7B2Q8TF08 81 aa8.97□□□□□ -0.97
HDDC2-202ENST00000398153 IFI27L1Q96BM0 104 aa8.97□□□□□ -0.97
HDDC2-202ENST00000398153 C9orf116Q5BN46 136 aaPredicted RBP8.95□□□□□ -0.98
HDDC2-202ENST00000398153 CHTOPQ9Y3Y2 248 aaKnown RBP8.95□□□□□ -0.98
HDDC2-202ENST00000398153 IGLV5-39A0A0G2JS06 123 aa8.94□□□□□ -0.98
HDDC2-202ENST00000398153 SERF1AO75920 110 aa8.94□□□□□ -0.98
HDDC2-202ENST00000398153 SPINK8P0C7L1 97 aa8.94□□□□□ -0.98
HDDC2-202ENST00000398153 ZNF22P17026 224 aaPredicted RBP8.94□□□□□ -0.98
HDDC2-202ENST00000398153 ODF1Q14990 250 aa8.94□□□□□ -0.98
HDDC2-202ENST00000398153 SFTA2Q6UW10 78 aa8.94□□□□□ -0.98
HDDC2-202ENST00000398153 A0A1W2PNN7 141 aa8.93□□□□□ -0.98
HDDC2-202ENST00000398153 LEPROTL1O95214 131 aa8.93□□□□□ -0.98
HDDC2-202ENST00000398153 FAM19A2Q8N3H0 131 aa8.93□□□□□ -0.98
HDDC2-202ENST00000398153 C11orf86A6NJI1 115 aa8.92□□□□□ -0.98
HDDC2-202ENST00000398153 GAGE2EQ4V326 116 aa8.92□□□□□ -0.98
HDDC2-202ENST00000398153 GAGE2DQ9UEU5 116 aa8.92□□□□□ -0.98
HDDC2-202ENST00000398153 HSPB8Q9UJY1 196 aa8.92□□□□□ -0.98
HDDC2-202ENST00000398153 SCO1O75880 301 aa8.91□□□□□ -0.98
HDDC2-202ENST00000398153 LINC00310P59036 64 aa8.91□□□□□ -0.98
HDDC2-202ENST00000398153 TMEM170BQ5T4T1 132 aa8.91□□□□□ -0.98
HDDC2-202ENST00000398153 KRTAP29-1A8MX34 341 aaPredicted RBP8.9□□□□□ -0.98
HDDC2-202ENST00000398153 PRR3P79522 188 aaKnown RBP8.9□□□□□ -0.98
HDDC2-202ENST00000398153 OXTP01178 125 aa8.89□□□□□ -0.99
HDDC2-202ENST00000398153 HIST1H2BKO60814 126 aa8.88□□□□□ -0.99
HDDC2-202ENST00000398153 HIST1H2BJP06899 126 aa8.88□□□□□ -0.99
HDDC2-202ENST00000398153 S100A1P23297 94 aa8.88□□□□□ -0.99
HDDC2-202ENST00000398153 HIST1H2BOP23527 126 aa8.88□□□□□ -0.99
HDDC2-202ENST00000398153 HIST1H2BBP33778 126 aa8.88□□□□□ -0.99
HDDC2-202ENST00000398153 HIST1H2BDP58876 126 aa8.88□□□□□ -0.99
HDDC2-202ENST00000398153 HIST1H2BCP62807 126 aa8.88□□□□□ -0.99
HDDC2-202ENST00000398153 COX17Q14061 63 aa8.88□□□□□ -0.99
HDDC2-202ENST00000398153 HIST2H2BEQ16778 126 aa8.88□□□□□ -0.99
HDDC2-202ENST00000398153 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.88□□□□□ -0.99
HDDC2-202ENST00000398153 C9orf129Q5T035 196 aaKnown RBP8.88□□□□□ -0.99
HDDC2-202ENST00000398153 HIST1H2BHQ93079 126 aa8.88□□□□□ -0.99
HDDC2-202ENST00000398153 HIST1H2BNQ99877 126 aa8.88□□□□□ -0.99
HDDC2-202ENST00000398153 HIST1H2BMQ99879 126 aa8.88□□□□□ -0.99
HDDC2-202ENST00000398153 FLG2Q5D862 2391 aaPredicted RBP8.88□□□□□ -0.99
HDDC2-202ENST00000398153 MYCBP2O75592 4640 aa8.87□□□□□ -0.99
HDDC2-202ENST00000398153 TMEM223A0PJW6 202 aa8.87□□□□□ -0.99
HDDC2-202ENST00000398153 NUPR1O60356 82 aa8.87□□□□□ -0.99
HDDC2-202ENST00000398153 FAM168BA1KXE4 195 aa8.86□□□□□ -0.99
HDDC2-202ENST00000398153 PLNP26678 52 aa8.86□□□□□ -0.99
HDDC2-202ENST00000398153 HNRNPA3P51991 378 aaKnown RBP8.86□□□□□ -0.99
HDDC2-202ENST00000398153 PHF5AQ7RTV0 110 aaKnown RBP8.86□□□□□ -0.99
HDDC2-202ENST00000398153 FAM19A5Q7Z5A7 132 aaPredicted RBP8.86□□□□□ -0.99
HDDC2-202ENST00000398153 SPINK6Q6UWN8 80 aa8.85□□□□□ -0.99
HDDC2-202ENST00000398153 MAP1LC3CQ9BXW4 147 aa8.85□□□□□ -0.99
HDDC2-202ENST00000398153 PLA2G2DQ9UNK4 145 aa8.85□□□□□ -0.99
HDDC2-202ENST00000398153 M0QXV9 152 aa8.84□□□□□ -0.99
HDDC2-202ENST00000398153 FABP4P15090 132 aa8.84□□□□□ -0.99
HDDC2-202ENST00000398153 LBHQ53QV2 105 aaPredicted RBP8.84□□□□□ -0.99
HDDC2-202ENST00000398153 KRTAP7-1Q8IUC3 87 aa8.84□□□□□ -0.99
HDDC2-202ENST00000398153 XAGE1AQ9HD64 81 aa8.84□□□□□ -0.99
HDDC2-202ENST00000398153 TP73-AS1Q9UF72 201 aa8.84□□□□□ -0.99
HDDC2-202ENST00000398153 PSORS1C2Q9UIG4 136 aa8.84□□□□□ -0.99
HDDC2-202ENST00000398153 J3QL48 77 aa8.83□□□□□ -1
HDDC2-202ENST00000398153 ZNF625Q96I27 306 aaPredicted RBP8.83□□□□□ -1
HDDC2-202ENST00000398153 ERG28Q9UKR5 140 aa8.83□□□□□ -1
HDDC2-202ENST00000398153 DMBT1Q9UGM3 2413 aaPredicted RBP8.82□□□□□ -1
HDDC2-202ENST00000398153 H0Y8G0 127 aa8.82□□□□□ -1
HDDC2-202ENST00000398153 SRSF9Q13242 221 aaKnown RBP eCLIP8.82□□□□□ -1
HDDC2-202ENST00000398153 COA6Q5JTJ3 125 aaKnown RBP8.82□□□□□ -1
HDDC2-202ENST00000398153 PKHD1L1Q86WI1 4243 aa8.82□□□□□ -1
HDDC2-202ENST00000398153 LINC00587B1AMM8 73 aa8.81□□□□□ -1
HDDC2-202ENST00000398153 DPM2O94777 84 aa8.81□□□□□ -1
HDDC2-202ENST00000398153 HERV-K104P63124 156 aa8.81□□□□□ -1
HDDC2-202ENST00000398153 UBE2BP63146 152 aa8.81□□□□□ -1
HDDC2-202ENST00000398153 C22orf24Q9Y442 160 aa8.81□□□□□ -1
HDDC2-202ENST00000398153 IGKCP01834 107 aa8.8□□□□□ -1
HDDC2-202ENST00000398153 PFN2P35080 140 aa8.8□□□□□ -1
HDDC2-202ENST00000398153 C1orf137Q5JT78 98 aa8.8□□□□□ -1
HDDC2-202ENST00000398153 SERTAD4-AS1Q5TG53 156 aa8.8□□□□□ -1
HDDC2-202ENST00000398153 IGLV5-37A0A075B6J1 123 aa8.79□□□□□ -1
HDDC2-202ENST00000398153 HERVK_113P61574 105 aa8.79□□□□□ -1
HDDC2-202ENST00000398153 MRPL55Q7Z7F7 128 aaKnown RBP8.79□□□□□ -1
HDDC2-202ENST00000398153 REG3GQ6UW15 175 aa8.78□□□□□ -1
HDDC2-202ENST00000398153 PLEKHB2Q96CS7 222 aa8.78□□□□□ -1
HDDC2-202ENST00000398153 MYMXA0A1B0GTQ4 84 aa8.77□□□□□ -1.01
HDDC2-202ENST00000398153 SYS1-DBNDD2H3BUS1 97 aa8.77□□□□□ -1.01
HDDC2-202ENST00000398153 LEPROTO15243 131 aa8.77□□□□□ -1.01
HDDC2-202ENST00000398153 IGLV7-43P04211 117 aa8.77□□□□□ -1.01
HDDC2-202ENST00000398153 RPL24P83731 157 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms