RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 Q6ZRU5 148 aa13.8□□□□□ -0.2
FXN-202ENST00000396364 TRBV30A0A0K0K1B3 111 aa13.79□□□□□ -0.2
FXN-202ENST00000396364 TMA7Q9Y2S6 64 aaKnown RBP13.79□□□□□ -0.2
FXN-202ENST00000396364 DNAH11Q96DT5 4516 aa13.78□□□□□ -0.2
FXN-202ENST00000396364 LOC107984640A0A0U1RRK4 108 aa13.76□□□□□ -0.21
FXN-202ENST00000396364 LINC01620Q4KN68 170 aa13.76□□□□□ -0.21
FXN-202ENST00000396364 C2orf82Q6UX34 121 aa13.76□□□□□ -0.21
FXN-202ENST00000396364 UNQ6190/PRO20217Q6UXQ8 127 aa13.76□□□□□ -0.21
FXN-202ENST00000396364 KRTAP10-1P60331 282 aa13.75□□□□□ -0.21
FXN-202ENST00000396364 PLEKHB2Q96CS7 222 aa13.75□□□□□ -0.21
FXN-202ENST00000396364 SDIM1Q6ZPB5 146 aa13.74□□□□□ -0.21
FXN-202ENST00000396364 LINC00474Q9P2X8 69 aa13.74□□□□□ -0.21
FXN-202ENST00000396364 C6orf48Q9UBA6 75 aa13.73□□□□□ -0.21
FXN-202ENST00000396364 PKHD1P08F94 4074 aa13.73□□□□□ -0.21
FXN-202ENST00000396364 LEPROTO15243 131 aa13.72□□□□□ -0.21
FXN-202ENST00000396364 C10orf25Q5T742 122 aa13.72□□□□□ -0.21
FXN-202ENST00000396364 TLX1NBP0CAT3 122 aa13.7□□□□□ -0.22
FXN-202ENST00000396364 RPL18AQ02543 176 aaKnown RBP13.7□□□□□ -0.22
FXN-202ENST00000396364 E9PLD3 99 aa13.69□□□□□ -0.22
FXN-202ENST00000396364 LGALS3P17931 250 aaKnown RBP13.69□□□□□ -0.22
FXN-202ENST00000396364 DPH3Q96FX2 82 aa13.69□□□□□ -0.22
FXN-202ENST00000396364 MYMXA0A1B0GTQ4 84 aa13.68□□□□□ -0.22
FXN-202ENST00000396364 NDUFC2-KCTD14E9PQ53 114 aa13.68□□□□□ -0.22
FXN-202ENST00000396364 NMUP48645 174 aa13.68□□□□□ -0.22
FXN-202ENST00000396364 HERV-K104P63124 156 aa13.68□□□□□ -0.22
FXN-202ENST00000396364 J3QQQ9 107 aa13.67□□□□□ -0.22
FXN-202ENST00000396364 SCGB1D1O95968 90 aa13.67□□□□□ -0.22
FXN-202ENST00000396364 GAGE2BQ13066 116 aa13.67□□□□□ -0.22
FXN-202ENST00000396364 EPPK1P58107 5090 aaKnown RBP13.67□□□□□ -0.22
FXN-202ENST00000396364 IGKV2-24A0A0C4DH68 120 aa13.66□□□□□ -0.22
FXN-202ENST00000396364 LINC00587B1AMM8 73 aa13.66□□□□□ -0.22
FXN-202ENST00000396364 HSBP1L1C9JCN9 74 aa13.66□□□□□ -0.22
FXN-202ENST00000396364 CDK2AP2O75956 126 aa13.66□□□□□ -0.22
FXN-202ENST00000396364 Q6ZSA8 131 aa13.66□□□□□ -0.22
FXN-202ENST00000396364 NDUFA12Q9UI09 145 aa13.66□□□□□ -0.22
FXN-202ENST00000396364 PTTG1IPP53801 180 aa13.65□□□□□ -0.22
FXN-202ENST00000396364 COX17Q14061 63 aa13.65□□□□□ -0.22
FXN-202ENST00000396364 ZNF625Q96I27 306 aaPredicted RBP13.65□□□□□ -0.22
FXN-202ENST00000396364 DNAH5Q8TE73 4624 aa13.65□□□□□ -0.22
FXN-202ENST00000396364 A0A096LNI7 61 aa13.64□□□□□ -0.23
FXN-202ENST00000396364 STPG4Q8N801 248 aa13.64□□□□□ -0.23
FXN-202ENST00000396364 MAJINQ3KP22 176 aa13.63□□□□□ -0.23
FXN-202ENST00000396364 C9orf116Q5BN46 136 aaPredicted RBP13.63□□□□□ -0.23
FXN-202ENST00000396364 ATOH7Q8N100 152 aa13.63□□□□□ -0.23
FXN-202ENST00000396364 ERG28Q9UKR5 140 aa13.63□□□□□ -0.23
FXN-202ENST00000396364 CIRBPQ14011 172 aaKnown RBP13.62□□□□□ -0.23
FXN-202ENST00000396364 SPACA4Q8TDM5 124 aa13.62□□□□□ -0.23
FXN-202ENST00000396364 FAM30AQ9NZY2 134 aa13.62□□□□□ -0.23
FXN-202ENST00000396364 GAGE2EQ4V326 116 aa13.61□□□□□ -0.23
FXN-202ENST00000396364 MEIG1Q5JSS6 88 aa13.61□□□□□ -0.23
FXN-202ENST00000396364 Q6ZRP5 223 aa13.61□□□□□ -0.23
FXN-202ENST00000396364 GAGE2DQ9UEU5 116 aa13.61□□□□□ -0.23
FXN-202ENST00000396364 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.61□□□□□ -0.23
FXN-202ENST00000396364 CHTF8P0CG12 524 aa13.6□□□□□ -0.23
FXN-202ENST00000396364 DYNC1H1Q14204 4646 aaKnown RBP13.59□□□□□ -0.23
FXN-202ENST00000396364 PFN2P35080 140 aa13.59□□□□□ -0.23
FXN-202ENST00000396364 TSPEAR-AS2P59090 65 aa13.59□□□□□ -0.23
FXN-202ENST00000396364 LINC00158P58513 81 aa13.57□□□□□ -0.24
FXN-202ENST00000396364 SCXQ7RTU7 201 aa13.57□□□□□ -0.24
FXN-202ENST00000396364 JOSD1Q15040 202 aaPredicted RBP13.56□□□□□ -0.24
FXN-202ENST00000396364 A0A087WYN8 130 aa13.55□□□□□ -0.24
FXN-202ENST00000396364 CIRBP-AS1Q8TBR5 109 aa13.55□□□□□ -0.24
FXN-202ENST00000396364 LRP1BQ9NZR2 4599 aa13.55□□□□□ -0.24
FXN-202ENST00000396364 ZNF815PA8K554 130 aa13.54□□□□□ -0.24
FXN-202ENST00000396364 XGP55808 180 aa13.54□□□□□ -0.24
FXN-202ENST00000396364 ANKRD39Q53RE8 183 aa13.54□□□□□ -0.24
FXN-202ENST00000396364 PANO1I0J062 215 aa13.53□□□□□ -0.24
FXN-202ENST00000396364 PLAC8Q9NZF1 115 aa13.53□□□□□ -0.24
FXN-202ENST00000396364 IGKV2D-26A0A0A0MRZ7 120 aa13.52□□□□□ -0.25
FXN-202ENST00000396364 XAGE1AQ9HD64 81 aa13.52□□□□□ -0.25
FXN-202ENST00000396364 SMIM13P0DJ93 91 aa13.51□□□□□ -0.25
FXN-202ENST00000396364 A0A0U1RRA0 63 aa13.5□□□□□ -0.25
FXN-202ENST00000396364 A0A0J9YXY3 114 aa13.49□□□□□ -0.25
FXN-202ENST00000396364 HAMPP81172 84 aa13.49□□□□□ -0.25
FXN-202ENST00000396364 C9orf129Q5T035 196 aaKnown RBP13.49□□□□□ -0.25
FXN-202ENST00000396364 SCGB1D4Q6XE38 83 aa13.49□□□□□ -0.25
FXN-202ENST00000396364 SND1-IT1Q9HBX3 110 aa13.49□□□□□ -0.25
FXN-202ENST00000396364 VAMP8Q9BV40 100 aa13.48□□□□□ -0.25
FXN-202ENST00000396364 MIR7-3HGQ8N6C7 128 aa13.47□□□□□ -0.25
FXN-202ENST00000396364 C7orf33Q8WU49 177 aa13.47□□□□□ -0.25
FXN-202ENST00000396364 TIMM17BO60830 172 aa13.46□□□□□ -0.25
FXN-202ENST00000396364 RPL24P83731 157 aaKnown RBP13.46□□□□□ -0.25
FXN-202ENST00000396364 FAM19A5Q7Z5A7 132 aaPredicted RBP13.46□□□□□ -0.25
FXN-202ENST00000396364 MIEN1Q9BRT3 115 aa13.46□□□□□ -0.25
FXN-202ENST00000396364 PLA2G2DQ9UNK4 145 aa13.46□□□□□ -0.25
FXN-202ENST00000396364 BIRC6Q9NR09 4857 aa13.46□□□□□ -0.26
FXN-202ENST00000396364 DNAH8Q96JB1 4490 aa13.45□□□□□ -0.26
FXN-202ENST00000396364 A0A1W2PNN7 141 aa13.44□□□□□ -0.26
FXN-202ENST00000396364 TMEM238C9JI98 176 aa13.44□□□□□ -0.26
FXN-202ENST00000396364 TTTY13Q9BZ97 58 aa13.44□□□□□ -0.26
FXN-202ENST00000396364 EPM2AB3EWF7 344 aa13.43□□□□□ -0.26
FXN-202ENST00000396364 FAM229AH3BQW9 127 aa13.43□□□□□ -0.26
FXN-202ENST00000396364 PYY3Q5JQD4 70 aa13.43□□□□□ -0.26
FXN-202ENST00000396364 PCP2Q8IVA1 136 aa13.43□□□□□ -0.26
FXN-202ENST00000396364 PAM16Q9Y3D7 125 aa13.43□□□□□ -0.26
FXN-202ENST00000396364 FAM168BA1KXE4 195 aa13.42□□□□□ -0.26
FXN-202ENST00000396364 M0QXV9 152 aa13.42□□□□□ -0.26
FXN-202ENST00000396364 SPATA45Q537H7 98 aa13.42□□□□□ -0.26
FXN-202ENST00000396364 LBHQ53QV2 105 aaPredicted RBP13.42□□□□□ -0.26
FXN-202ENST00000396364 NKAPP1Q8N9T2 125 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms