RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 IGKV3OR2-268A0A0C4DH90 116 aa6.67□□□□□ -1.34
DDX39B-202ENST00000396172 C11orf86A6NJI1 115 aa6.67□□□□□ -1.34
DDX39B-202ENST00000396172 SRSF9Q13242 221 aaKnown RBP eCLIP6.67□□□□□ -1.34
DDX39B-202ENST00000396172 CLPSL2Q6UWE3 100 aa6.67□□□□□ -1.34
DDX39B-202ENST00000396172 SCGB1D4Q6XE38 83 aa6.67□□□□□ -1.34
DDX39B-202ENST00000396172 LYSTQ99698 3801 aa6.67□□□□□ -1.34
DDX39B-202ENST00000396172 C1orf43Q9BWL3 253 aa6.67□□□□□ -1.34
DDX39B-202ENST00000396172 PLECQ15149 4684 aaKnown RBP6.66□□□□□ -1.34
DDX39B-202ENST00000396172 LCE6AA0A183 80 aa6.66□□□□□ -1.34
DDX39B-202ENST00000396172 LINC00959A0A1B0GUT2 108 aa6.66□□□□□ -1.34
DDX39B-202ENST00000396172 FAM19A3Q7Z5A8 133 aa6.66□□□□□ -1.34
DDX39B-202ENST00000396172 FAM104AQ969W3 186 aa6.66□□□□□ -1.34
DDX39B-202ENST00000396172 TRAV13-1A0A0B4J241 112 aa6.65□□□□□ -1.34
DDX39B-202ENST00000396172 HERVK_113P63121 156 aa6.65□□□□□ -1.34
DDX39B-202ENST00000396172 SFTA2Q6UW10 78 aa6.65□□□□□ -1.34
DDX39B-202ENST00000396172 ENHOQ6UWT2 76 aa6.65□□□□□ -1.34
DDX39B-202ENST00000396172 GEMIN7Q9H840 131 aaKnown RBP6.65□□□□□ -1.34
DDX39B-202ENST00000396172 SPINK8P0C7L1 97 aa6.65□□□□□ -1.35
DDX39B-202ENST00000396172 PSMB2P49721 201 aa6.65□□□□□ -1.35
DDX39B-202ENST00000396172 TSPEAR-AS2P59090 65 aa6.65□□□□□ -1.35
DDX39B-202ENST00000396172 Q9HAA7 133 aa6.65□□□□□ -1.35
DDX39B-202ENST00000396172 TINCRA0A1B0GVN0 87 aa6.64□□□□□ -1.35
DDX39B-202ENST00000396172 IGKV2D-24A0A075B6R9 120 aa6.64□□□□□ -1.35
DDX39B-202ENST00000396172 Q6ZR54 194 aa6.64□□□□□ -1.35
DDX39B-202ENST00000396172 CHCHD10Q8WYQ3 142 aaPredicted RBP6.64□□□□□ -1.35
DDX39B-202ENST00000396172 KRTAP1-5Q9BYS1 174 aa6.64□□□□□ -1.35
DDX39B-202ENST00000396172 A0A0B4J2C4 111 aa6.63□□□□□ -1.35
DDX39B-202ENST00000396172 LOC107984156A0A0G2JMH3 177 aa6.63□□□□□ -1.35
DDX39B-202ENST00000396172 CD164L2Q6UWJ8 174 aa6.63□□□□□ -1.35
DDX39B-202ENST00000396172 ARL17AQ8IVW1 177 aa6.63□□□□□ -1.35
DDX39B-202ENST00000396172 CARD19Q96LW7 228 aa6.63□□□□□ -1.35
DDX39B-202ENST00000396172 PRO1854Q9UHT4 67 aa6.63□□□□□ -1.35
DDX39B-202ENST00000396172 IGLV10-54A0A075B6I4 117 aa6.62□□□□□ -1.35
DDX39B-202ENST00000396172 CFC1BP0CG36 223 aa6.62□□□□□ -1.35
DDX39B-202ENST00000396172 CFC1P0CG37 223 aa6.62□□□□□ -1.35
DDX39B-202ENST00000396172 XCL1P47992 114 aa6.62□□□□□ -1.35
DDX39B-202ENST00000396172 LINC00242Q5T6M2 205 aa6.62□□□□□ -1.35
DDX39B-202ENST00000396172 C6orf223Q8N319 242 aa6.62□□□□□ -1.35
DDX39B-202ENST00000396172 ERG28Q9UKR5 140 aa6.62□□□□□ -1.35
DDX39B-202ENST00000396172 DNAH6Q9C0G6 4158 aa6.62□□□□□ -1.35
DDX39B-202ENST00000396172 LEPROTO15243 131 aa6.62□□□□□ -1.35
DDX39B-202ENST00000396172 PSCAO43653 123 aa6.62□□□□□ -1.35
DDX39B-202ENST00000396172 TCL1BO95988 128 aa6.62□□□□□ -1.35
DDX39B-202ENST00000396172 VPS13DQ5THJ4 4388 aa6.61□□□□□ -1.35
DDX39B-202ENST00000396172 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.61□□□□□ -1.35
DDX39B-202ENST00000396172 A0A0J9YXV3 536 aa6.61□□□□□ -1.35
DDX39B-202ENST00000396172 M0R2N4 97 aa6.61□□□□□ -1.35
DDX39B-202ENST00000396172 MT-ATP8P03928 68 aa6.61□□□□□ -1.35
DDX39B-202ENST00000396172 XGP55808 180 aa6.61□□□□□ -1.35
DDX39B-202ENST00000396172 LINC01561Q8N1V8 128 aa6.61□□□□□ -1.35
DDX39B-202ENST00000396172 IGLV5-45A0A087WSX0 123 aa6.61□□□□□ -1.35
DDX39B-202ENST00000396172 COX7A2LO14548 114 aa6.61□□□□□ -1.35
DDX39B-202ENST00000396172 LGALS3P17931 250 aaKnown RBP6.61□□□□□ -1.35
DDX39B-202ENST00000396172 C1orf134Q5TEV5 83 aa6.61□□□□□ -1.35
DDX39B-202ENST00000396172 Q6Q795 121 aa6.61□□□□□ -1.35
DDX39B-202ENST00000396172 J3QQQ9 107 aa6.6□□□□□ -1.35
DDX39B-202ENST00000396172 EIF4EBP3O60516 100 aaPredicted RBP6.6□□□□□ -1.35
DDX39B-202ENST00000396172 SCGB1C2P0DMR2 95 aa6.6□□□□□ -1.35
DDX39B-202ENST00000396172 IGHV3OR16-9A0A0B4J2B5 98 aa6.59□□□□□ -1.35
DDX39B-202ENST00000396172 MALP21145 153 aa6.59□□□□□ -1.35
DDX39B-202ENST00000396172 TMEM170BQ5T4T1 132 aa6.59□□□□□ -1.35
DDX39B-202ENST00000396172 ANKRD29Q8N6D5 301 aa6.59□□□□□ -1.35
DDX39B-202ENST00000396172 A0A087WZ39 114 aa6.59□□□□□ -1.35
DDX39B-202ENST00000396172 TMEM223A0PJW6 202 aa6.59□□□□□ -1.35
DDX39B-202ENST00000396172 ZNF22P17026 224 aaPredicted RBP6.59□□□□□ -1.35
DDX39B-202ENST00000396172 RPL13AP40429 203 aaKnown RBP6.59□□□□□ -1.35
DDX39B-202ENST00000396172 SLC25A20O43772 301 aa6.58□□□□□ -1.36
DDX39B-202ENST00000396172 ATXN8Q156A1 80 aa6.58□□□□□ -1.36
DDX39B-202ENST00000396172 DNAH1Q9P2D7 4330 aa6.58□□□□□ -1.36
DDX39B-202ENST00000396172 IGHV1-58A0A0C4DH39 117 aa6.58□□□□□ -1.36
DDX39B-202ENST00000396172 COX6A2Q02221 97 aa6.58□□□□□ -1.36
DDX39B-202ENST00000396172 C14orf177Q52M58 125 aa6.58□□□□□ -1.36
DDX39B-202ENST00000396172 KRTAP26-1Q6PEX3 210 aa6.58□□□□□ -1.36
DDX39B-202ENST00000396172 CDKN2A-AS1Q9UH64 79 aa6.58□□□□□ -1.36
DDX39B-202ENST00000396172 TRBV30A0A0K0K1B3 111 aa6.57□□□□□ -1.36
DDX39B-202ENST00000396172 C5orf38Q86SI9 138 aa6.56□□□□□ -1.36
DDX39B-202ENST00000396172 TRBV10-2A0A0K0K1G8 114 aa6.56□□□□□ -1.36
DDX39B-202ENST00000396172 A4D1N5 150 aa6.56□□□□□ -1.36
DDX39B-202ENST00000396172 Q6ZRN7 208 aaPredicted RBP6.56□□□□□ -1.36
DDX39B-202ENST00000396172 ANAPC13Q9BS18 74 aa6.56□□□□□ -1.36
DDX39B-202ENST00000396172 IGHV3-64A0A075B6Q5 118 aa6.55□□□□□ -1.36
DDX39B-202ENST00000396172 SMIM1B2RUZ4 78 aa6.55□□□□□ -1.36
DDX39B-202ENST00000396172 LINC01620Q4KN68 170 aa6.55□□□□□ -1.36
DDX39B-202ENST00000396172 C9JAW5 83 aa6.55□□□□□ -1.36
DDX39B-202ENST00000396172 H3BT86 120 aa6.55□□□□□ -1.36
DDX39B-202ENST00000396172 PRSS2P07478 247 aa6.55□□□□□ -1.36
DDX39B-202ENST00000396172 SPANXDQ9BXN6 97 aa6.55□□□□□ -1.36
DDX39B-202ENST00000396172 SPANXCQ9NY87 97 aa6.55□□□□□ -1.36
DDX39B-202ENST00000396172 KMT2AQ03164 3969 aa6.54□□□□□ -1.36
DDX39B-202ENST00000396172 GVQW2A0A096LPI5 108 aaPredicted RBP6.54□□□□□ -1.36
DDX39B-202ENST00000396172 F8WDY8 70 aa6.54□□□□□ -1.36
DDX39B-202ENST00000396172 SNCGO76070 127 aa6.54□□□□□ -1.36
DDX39B-202ENST00000396172 GAGE2BQ13066 116 aa6.54□□□□□ -1.36
DDX39B-202ENST00000396172 GAGE2EQ4V326 116 aa6.54□□□□□ -1.36
DDX39B-202ENST00000396172 Q8IZM0 81 aa6.54□□□□□ -1.36
DDX39B-202ENST00000396172 GAGE2DQ9UEU5 116 aa6.54□□□□□ -1.36
DDX39B-202ENST00000396172 IGLV5-39A0A0G2JS06 123 aa6.53□□□□□ -1.36
DDX39B-202ENST00000396172 FAM240AA0A1B0GVK7 77 aa6.53□□□□□ -1.36
DDX39B-202ENST00000396172 USP17L23D6RBM5 183 aa6.53□□□□□ -1.36
DDX39B-202ENST00000396172 ZNF561-AS1K7EIQ3 104 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms