RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 NTN5Q8WTR8 489 aaPredicted RBP11.54□□□□□ -0.56
NUP50-202ENST00000396096 SND1-IT1Q9HBX3 110 aa11.54□□□□□ -0.56
NUP50-202ENST00000396096 SCGB1A1P11684 91 aa11.53□□□□□ -0.56
NUP50-202ENST00000396096 C6orf226Q5I0X4 101 aa11.53□□□□□ -0.56
NUP50-202ENST00000396096 CD164L2Q6UWJ8 174 aa11.53□□□□□ -0.56
NUP50-202ENST00000396096 C2orf82Q6UX34 121 aa11.53□□□□□ -0.56
NUP50-202ENST00000396096 LINC00269Q8N2A0 174 aa11.53□□□□□ -0.56
NUP50-202ENST00000396096 CCL18P55774 89 aa11.53□□□□□ -0.56
NUP50-202ENST00000396096 CLPSL2Q6UWE3 100 aa11.53□□□□□ -0.56
NUP50-202ENST00000396096 IGKV2-28A0A075B6P5 120 aa11.52□□□□□ -0.57
NUP50-202ENST00000396096 IGKV2D-28P01615 120 aa11.52□□□□□ -0.57
NUP50-202ENST00000396096 LELP1Q5T871 98 aa11.52□□□□□ -0.57
NUP50-202ENST00000396096 CRPP02741 224 aa11.51□□□□□ -0.57
NUP50-202ENST00000396096 RPL28P46779 137 aaKnown RBP11.51□□□□□ -0.57
NUP50-202ENST00000396096 CYSRT1A8MQ03 144 aa11.51□□□□□ -0.57
NUP50-202ENST00000396096 REG3AQ06141 175 aa11.51□□□□□ -0.57
NUP50-202ENST00000396096 CHCHD10Q8WYQ3 142 aaPredicted RBP11.51□□□□□ -0.57
NUP50-202ENST00000396096 ANGP03950 147 aaKnown RBP11.5□□□□□ -0.57
NUP50-202ENST00000396096 LINC00337Q8N6G1 96 aa11.5□□□□□ -0.57
NUP50-202ENST00000396096 UBE2WQ96B02 151 aa11.5□□□□□ -0.57
NUP50-202ENST00000396096 TRACP01848 142 aa11.49□□□□□ -0.57
NUP50-202ENST00000396096 PFN2P35080 140 aa11.49□□□□□ -0.57
NUP50-202ENST00000396096 CXCL5P42830 114 aa11.49□□□□□ -0.57
NUP50-202ENST00000396096 KIAA0087Q14695 138 aa11.49□□□□□ -0.57
NUP50-202ENST00000396096 Q8N3U1 123 aa11.49□□□□□ -0.57
NUP50-202ENST00000396096 KRTAP10-11P60412 298 aa11.48□□□□□ -0.57
NUP50-202ENST00000396096 EGFEM1PQ0D2K5 195 aa11.48□□□□□ -0.57
NUP50-202ENST00000396096 TEX49A0A1B0GTD5 131 aa11.47□□□□□ -0.57
NUP50-202ENST00000396096 HTN3P15516 51 aa11.47□□□□□ -0.57
NUP50-202ENST00000396096 OXLD1Q5BKU9 147 aa11.47□□□□□ -0.57
NUP50-202ENST00000396096 KRTAP24-1Q3LI83 254 aa11.46□□□□□ -0.57
NUP50-202ENST00000396096 DEFB121Q5J5C9 76 aa11.46□□□□□ -0.57
NUP50-202ENST00000396096 C11orf68Q9H3H3 251 aaKnown RBP11.46□□□□□ -0.58
NUP50-202ENST00000396096 CKS1BP61024 79 aa11.45□□□□□ -0.58
NUP50-202ENST00000396096 COX17Q14061 63 aa11.45□□□□□ -0.58
NUP50-202ENST00000396096 PRR34Q9NV39 138 aa11.45□□□□□ -0.58
NUP50-202ENST00000396096 H3BNG1 76 aa11.44□□□□□ -0.58
NUP50-202ENST00000396096 TRRAPQ9Y4A5 3859 aa11.44□□□□□ -0.58
NUP50-202ENST00000396096 CFAP161Q6P656 301 aa11.44□□□□□ -0.58
NUP50-202ENST00000396096 F8P00451 2351 aa11.44□□□□□ -0.58
NUP50-202ENST00000396096 IGLV10-54A0A075B6I4 117 aa11.43□□□□□ -0.58
NUP50-202ENST00000396096 MALP21145 153 aa11.43□□□□□ -0.58
NUP50-202ENST00000396096 XGP55808 180 aa11.43□□□□□ -0.58
NUP50-202ENST00000396096 FAM218AQ96MZ4 157 aa11.43□□□□□ -0.58
NUP50-202ENST00000396096 LYPD5Q6UWN5 251 aa11.42□□□□□ -0.58
NUP50-202ENST00000396096 SMIM11BQ8TCY0 68 aa11.42□□□□□ -0.58
NUP50-202ENST00000396096 KLK5Q9Y337 293 aaPredicted RBP11.42□□□□□ -0.58
NUP50-202ENST00000396096 TRAV8-4A0A0B4J246 113 aa11.4□□□□□ -0.58
NUP50-202ENST00000396096 MT-ATP8P03928 68 aa11.4□□□□□ -0.58
NUP50-202ENST00000396096 RETNQ9HD89 108 aa11.4□□□□□ -0.58
NUP50-202ENST00000396096 H0YGX0 51 aa11.4□□□□□ -0.59
NUP50-202ENST00000396096 NDUFC2O95298 119 aa11.39□□□□□ -0.59
NUP50-202ENST00000396096 FAM240AA0A1B0GVK7 77 aa11.38□□□□□ -0.59
NUP50-202ENST00000396096 ENHOQ6UWT2 76 aa11.38□□□□□ -0.59
NUP50-202ENST00000396096 C3orf56Q8N813 242 aa11.38□□□□□ -0.59
NUP50-202ENST00000396096 MUC7Q8TAX7 377 aa11.38□□□□□ -0.59
NUP50-202ENST00000396096 KLK12Q9UKR0 248 aa11.38□□□□□ -0.59
NUP50-202ENST00000396096 BAALC-AS2P0C853 105 aa11.37□□□□□ -0.59
NUP50-202ENST00000396096 KPRPQ5T749 579 aaPredicted RBP11.36□□□□□ -0.59
NUP50-202ENST00000396096 SPAG11BQ08648 103 aa11.36□□□□□ -0.59
NUP50-202ENST00000396096 C22orf24Q9Y442 160 aa11.36□□□□□ -0.59
NUP50-202ENST00000396096 OR13C6PQ8NH95 151 aa11.35□□□□□ -0.59
NUP50-202ENST00000396096 A0A0J9YWU9 116 aa11.34□□□□□ -0.59
NUP50-202ENST00000396096 Q6ZTC4 211 aa11.34□□□□□ -0.59
NUP50-202ENST00000396096 A0A087WYN8 130 aa11.33□□□□□ -0.6
NUP50-202ENST00000396096 C9orf116Q5BN46 136 aaPredicted RBP11.32□□□□□ -0.6
NUP50-202ENST00000396096 GVQW2A0A096LPI5 108 aaPredicted RBP11.32□□□□□ -0.6
NUP50-202ENST00000396096 NANOS2P60321 138 aaKnown RBP11.32□□□□□ -0.6
NUP50-202ENST00000396096 UNQ6190/PRO20217Q6UXQ8 127 aa11.32□□□□□ -0.6
NUP50-202ENST00000396096 Q9HAA7 133 aa11.32□□□□□ -0.6
NUP50-202ENST00000396096 C10orf25Q5T742 122 aa11.31□□□□□ -0.6
NUP50-202ENST00000396096 WFDC10BQ8IUB3 73 aa11.31□□□□□ -0.6
NUP50-202ENST00000396096 C6orf223Q8N319 242 aa11.31□□□□□ -0.6
NUP50-202ENST00000396096 CMYA5Q8N3K9 4069 aa11.31□□□□□ -0.6
NUP50-202ENST00000396096 DNAL4O96015 105 aa11.3□□□□□ -0.6
NUP50-202ENST00000396096 ACYP1P07311 99 aa11.29□□□□□ -0.6
NUP50-202ENST00000396096 TMEM126AQ9H061 195 aa11.29□□□□□ -0.6
NUP50-202ENST00000396096 DNAH3Q8TD57 4116 aa11.28□□□□□ -0.6
NUP50-202ENST00000396096 A0A1B0GX51 115 aa11.28□□□□□ -0.6
NUP50-202ENST00000396096 PRR3P79522 188 aaKnown RBP11.28□□□□□ -0.6
NUP50-202ENST00000396096 KRTAP26-1Q6PEX3 210 aa11.28□□□□□ -0.6
NUP50-202ENST00000396096 SNCGO76070 127 aa11.27□□□□□ -0.6
NUP50-202ENST00000396096 INAFM2P0DMQ5 153 aa11.27□□□□□ -0.6
NUP50-202ENST00000396096 LECT2O14960 151 aa11.27□□□□□ -0.61
NUP50-202ENST00000396096 C15orf53Q8NAA6 179 aa11.27□□□□□ -0.61
NUP50-202ENST00000396096 Q8NDZ9 215 aa11.27□□□□□ -0.61
NUP50-202ENST00000396096 LINC00167Q96N53 147 aa11.27□□□□□ -0.61
NUP50-202ENST00000396096 ESRGQ1W209 222 aa11.26□□□□□ -0.61
NUP50-202ENST00000396096 Q6Q795 121 aa11.25□□□□□ -0.61
NUP50-202ENST00000396096 C11orf45Q8TAV5 145 aa11.25□□□□□ -0.61
NUP50-202ENST00000396096 LINC00526Q96FQ7 95 aa11.25□□□□□ -0.61
NUP50-202ENST00000396096 DEFB131BA0A096LNP1 70 aa11.25□□□□□ -0.61
NUP50-202ENST00000396096 OBSCN-AS1Q96MR7 158 aa11.25□□□□□ -0.61
NUP50-202ENST00000396096 C6orf48Q9UBA6 75 aa11.24□□□□□ -0.61
NUP50-202ENST00000396096 LINC01556Q5JQF7 62 aa11.23□□□□□ -0.61
NUP50-202ENST00000396096 FBN1P35555 2871 aaKnown RBP11.23□□□□□ -0.61
NUP50-202ENST00000396096 STAB1Q9NY15 2570 aa11.23□□□□□ -0.61
NUP50-202ENST00000396096 NCR3O14931 201 aa11.23□□□□□ -0.61
NUP50-202ENST00000396096 A0A1B0GV72 72 aa11.22□□□□□ -0.61
NUP50-202ENST00000396096 GAGE2BQ13066 116 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms