RNA–Protein interactions for RNA: ENST00000395789.5

C6orf48-209, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 3 BASIC

Gene C6orf48, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-209ENST00000395789 LCE2AQ5TA79 106 aaPredicted RBP8.38□□□□□ -1.07
C6orf48-209ENST00000395789 Q8IZM0 81 aa8.38□□□□□ -1.07
C6orf48-209ENST00000395789 HSBP1O75506 76 aa8.37□□□□□ -1.07
C6orf48-209ENST00000395789 GAGE2BQ13066 116 aa8.37□□□□□ -1.07
C6orf48-209ENST00000395789 STPG4Q8N801 248 aa8.37□□□□□ -1.07
C6orf48-209ENST00000395789 DPH3Q96FX2 82 aa8.37□□□□□ -1.07
C6orf48-209ENST00000395789 LINC00474Q9P2X8 69 aa8.37□□□□□ -1.07
C6orf48-209ENST00000395789 PKIGQ9Y2B9 76 aa8.37□□□□□ -1.07
C6orf48-209ENST00000395789 TRBV30A0A0K0K1B3 111 aa8.36□□□□□ -1.07
C6orf48-209ENST00000395789 A0A1W2PNN7 141 aa8.36□□□□□ -1.07
C6orf48-209ENST00000395789 C11orf86A6NJI1 115 aa8.36□□□□□ -1.07
C6orf48-209ENST00000395789 PLA2G1BP04054 148 aaKnown RBP8.36□□□□□ -1.07
C6orf48-209ENST00000395789 SPINK8P0C7L1 97 aa8.36□□□□□ -1.07
C6orf48-209ENST00000395789 INAFM2P0DMQ5 153 aa8.36□□□□□ -1.07
C6orf48-209ENST00000395789 ZNF22P17026 224 aaPredicted RBP8.36□□□□□ -1.07
C6orf48-209ENST00000395789 NDUFA6P56556 154 aa8.36□□□□□ -1.07
C6orf48-209ENST00000395789 C9orf116Q5BN46 136 aaPredicted RBP8.36□□□□□ -1.07
C6orf48-209ENST00000395789 Q6ZRP5 223 aa8.36□□□□□ -1.07
C6orf48-209ENST00000395789 IFI27L1Q96BM0 104 aa8.36□□□□□ -1.07
C6orf48-209ENST00000395789 TOMM7Q9P0U1 55 aa8.36□□□□□ -1.07
C6orf48-209ENST00000395789 TRAV12-1A0A0B4J245 112 aa8.35□□□□□ -1.07
C6orf48-209ENST00000395789 IGLV5-39A0A0G2JS06 123 aa8.35□□□□□ -1.07
C6orf48-209ENST00000395789 HIST1H2BKO60814 126 aa8.35□□□□□ -1.07
C6orf48-209ENST00000395789 HIST1H2BJP06899 126 aa8.35□□□□□ -1.07
C6orf48-209ENST00000395789 HIST1H2BOP23527 126 aa8.35□□□□□ -1.07
C6orf48-209ENST00000395789 HIST1H2BBP33778 126 aa8.35□□□□□ -1.07
C6orf48-209ENST00000395789 HIST1H2BDP58876 126 aa8.35□□□□□ -1.07
C6orf48-209ENST00000395789 HIST1H2BCP62807 126 aa8.35□□□□□ -1.07
C6orf48-209ENST00000395789 HIST2H2BEQ16778 126 aa8.35□□□□□ -1.07
C6orf48-209ENST00000395789 C6orf226Q5I0X4 101 aa8.35□□□□□ -1.07
C6orf48-209ENST00000395789 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.35□□□□□ -1.07
C6orf48-209ENST00000395789 HIST1H2BHQ93079 126 aa8.35□□□□□ -1.07
C6orf48-209ENST00000395789 PACRGQ96M98 296 aaPredicted RBP8.35□□□□□ -1.07
C6orf48-209ENST00000395789 HIST1H2BNQ99877 126 aa8.35□□□□□ -1.07
C6orf48-209ENST00000395789 HIST1H2BMQ99879 126 aa8.35□□□□□ -1.07
C6orf48-209ENST00000395789 PRSS2P07478 247 aa8.34□□□□□ -1.07
C6orf48-209ENST00000395789 RPL18AQ02543 176 aaKnown RBP8.34□□□□□ -1.07
C6orf48-209ENST00000395789 RPL37AP61513 92 aaKnown RBP8.33□□□□□ -1.08
C6orf48-209ENST00000395789 KRTAP7-1Q8IUC3 87 aa8.33□□□□□ -1.08
C6orf48-209ENST00000395789 COX7B2Q8TF08 81 aa8.33□□□□□ -1.08
C6orf48-209ENST00000395789 CHTOPQ9Y3Y2 248 aaKnown RBP8.33□□□□□ -1.08
C6orf48-209ENST00000395789 HNRNPA3P51991 378 aaKnown RBP8.32□□□□□ -1.08
C6orf48-209ENST00000395789 CKS1BP61024 79 aa8.32□□□□□ -1.08
C6orf48-209ENST00000395789 NDUFC2-KCTD14E9PQ53 114 aa8.31□□□□□ -1.08
C6orf48-209ENST00000395789 F8VRH5 84 aa8.31□□□□□ -1.08
C6orf48-209ENST00000395789 H3BRM9 83 aa8.31□□□□□ -1.08
C6orf48-209ENST00000395789 LEPROTL1O95214 131 aa8.31□□□□□ -1.08
C6orf48-209ENST00000395789 CXCL5P42830 114 aa8.31□□□□□ -1.08
C6orf48-209ENST00000395789 LOC100996750A0A140TA64 210 aa8.3□□□□□ -1.08
C6orf48-209ENST00000395789 FAM168BA1KXE4 195 aa8.3□□□□□ -1.08
C6orf48-209ENST00000395789 ATP6V1G1O75348 118 aa8.3□□□□□ -1.08
C6orf48-209ENST00000395789 ODF1Q14990 250 aa8.3□□□□□ -1.08
C6orf48-209ENST00000395789 GAGE2EQ4V326 116 aa8.3□□□□□ -1.08
C6orf48-209ENST00000395789 C9orf129Q5T035 196 aaKnown RBP8.3□□□□□ -1.08
C6orf48-209ENST00000395789 KRTAP4-6Q9BYQ5 205 aa8.3□□□□□ -1.08
C6orf48-209ENST00000395789 GAGE2DQ9UEU5 116 aa8.3□□□□□ -1.08
C6orf48-209ENST00000395789 LRP1Q07954 4544 aaKnown RBP8.3□□□□□ -1.08
C6orf48-209ENST00000395789 S100A1P23297 94 aa8.29□□□□□ -1.08
C6orf48-209ENST00000395789 TMEM223A0PJW6 202 aa8.28□□□□□ -1.08
C6orf48-209ENST00000395789 TMEM170BQ5T4T1 132 aa8.28□□□□□ -1.08
C6orf48-209ENST00000395789 DMBT1Q9UGM3 2413 aaPredicted RBP8.28□□□□□ -1.08
C6orf48-209ENST00000395789 PKHD1L1Q86WI1 4243 aa8.27□□□□□ -1.09
C6orf48-209ENST00000395789 FABP4P15090 132 aa8.27□□□□□ -1.09
C6orf48-209ENST00000395789 COA6Q5JTJ3 125 aaKnown RBP8.27□□□□□ -1.09
C6orf48-209ENST00000395789 C7orf33Q8WU49 177 aa8.27□□□□□ -1.09
C6orf48-209ENST00000395789 PRR3P79522 188 aaKnown RBP8.26□□□□□ -1.09
C6orf48-209ENST00000395789 PHF5AQ7RTV0 110 aaKnown RBP8.26□□□□□ -1.09
C6orf48-209ENST00000395789 KRTAP11-1Q8IUC1 163 aa8.26□□□□□ -1.09
C6orf48-209ENST00000395789 ZNF625Q96I27 306 aaPredicted RBP8.26□□□□□ -1.09
C6orf48-209ENST00000395789 HSPB8Q9UJY1 196 aa8.26□□□□□ -1.09
C6orf48-209ENST00000395789 XAGE1AQ9HD64 81 aa8.25□□□□□ -1.09
C6orf48-209ENST00000395789 H0Y8G0 127 aa8.24□□□□□ -1.09
C6orf48-209ENST00000395789 SERTAD4-AS1Q5TG53 156 aa8.24□□□□□ -1.09
C6orf48-209ENST00000395789 FAT3Q8TDW7 4589 aa8.24□□□□□ -1.09
C6orf48-209ENST00000395789 FAM19A5Q7Z5A7 132 aaPredicted RBP8.23□□□□□ -1.09
C6orf48-209ENST00000395789 PMCHL2Q9BQD1 86 aa8.22□□□□□ -1.09
C6orf48-209ENST00000395789 PSORS1C2Q9UIG4 136 aa8.22□□□□□ -1.09
C6orf48-209ENST00000395789 SYS1-DBNDD2H3BUS1 97 aa8.21□□□□□ -1.1
C6orf48-209ENST00000395789 MAP1LC3CQ9BXW4 147 aa8.21□□□□□ -1.1
C6orf48-209ENST00000395789 KRTAP29-1A8MX34 341 aaPredicted RBP8.2□□□□□ -1.1
C6orf48-209ENST00000395789 M0QXV9 152 aa8.2□□□□□ -1.1
C6orf48-209ENST00000395789 DPM2O94777 84 aa8.2□□□□□ -1.1
C6orf48-209ENST00000395789 PLNP26678 52 aa8.2□□□□□ -1.1
C6orf48-209ENST00000395789 TSPEAR-AS2P59090 65 aa8.2□□□□□ -1.1
C6orf48-209ENST00000395789 SRSF9Q13242 221 aaKnown RBP eCLIP8.2□□□□□ -1.1
C6orf48-209ENST00000395789 ERG28Q9UKR5 140 aa8.2□□□□□ -1.1
C6orf48-209ENST00000395789 HERC1Q15751 4861 aa8.19□□□□□ -1.1
C6orf48-209ENST00000395789 PFN2P35080 140 aa8.19□□□□□ -1.1
C6orf48-209ENST00000395789 PLA2G2DQ9UNK4 145 aa8.19□□□□□ -1.1
C6orf48-209ENST00000395789 C22orf24Q9Y442 160 aa8.19□□□□□ -1.1
C6orf48-209ENST00000395789 IGKCP01834 107 aa8.18□□□□□ -1.1
C6orf48-209ENST00000395789 COX17Q14061 63 aa8.18□□□□□ -1.1
C6orf48-209ENST00000395789 LINC01545Q5VT33 79 aa8.18□□□□□ -1.1
C6orf48-209ENST00000395789 SFTA2Q6UW10 78 aa8.18□□□□□ -1.1
C6orf48-209ENST00000395789 LEPROTO15243 131 aa8.17□□□□□ -1.1
C6orf48-209ENST00000395789 SND1-IT1Q9HBX3 110 aa8.17□□□□□ -1.1
C6orf48-209ENST00000395789 IGLV5-37A0A075B6J1 123 aa8.16□□□□□ -1.1
C6orf48-209ENST00000395789 C3orf79P0CE67 100 aa8.16□□□□□ -1.1
C6orf48-209ENST00000395789 Q8NDZ9 215 aa8.16□□□□□ -1.1
C6orf48-209ENST00000395789 TP73-AS1Q9UF72 201 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms