RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 C4orf26Q17RF5 130 aa12.48□□□□□ -0.41
SREBF1-204ENST00000395756 HRCT1Q6UXD1 115 aa12.48□□□□□ -0.41
SREBF1-204ENST00000395756 IGHV3-33P01772 117 aa12.48□□□□□ -0.41
SREBF1-204ENST00000395756 XCL1P47992 114 aa12.47□□□□□ -0.41
SREBF1-204ENST00000395756 MIAQ16674 131 aa12.47□□□□□ -0.41
SREBF1-204ENST00000395756 NDUFA1O15239 70 aa12.46□□□□□ -0.41
SREBF1-204ENST00000395756 CIRBPQ14011 172 aaKnown RBP12.46□□□□□ -0.41
SREBF1-204ENST00000395756 RETNQ9HD89 108 aa12.46□□□□□ -0.41
SREBF1-204ENST00000395756 IGLV5-39A0A0G2JS06 123 aa12.46□□□□□ -0.42
SREBF1-204ENST00000395756 KRTAP24-1Q3LI83 254 aa12.46□□□□□ -0.42
SREBF1-204ENST00000395756 ANK2Q01484 3957 aa12.45□□□□□ -0.42
SREBF1-204ENST00000395756 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-204ENST00000395756 LINC00612Q8N6U2 182 aa12.45□□□□□ -0.42
SREBF1-204ENST00000395756 WFDC9Q8NEX5 89 aa12.45□□□□□ -0.42
SREBF1-204ENST00000395756 C3orf22Q8N5N4 141 aa12.44□□□□□ -0.42
SREBF1-204ENST00000395756 IGLV10-54A0A075B6I4 117 aa12.44□□□□□ -0.42
SREBF1-204ENST00000395756 LYRM9A8MSI8 78 aa12.43□□□□□ -0.42
SREBF1-204ENST00000395756 Q8NAQ8 132 aa12.42□□□□□ -0.42
SREBF1-204ENST00000395756 SPANXDQ9BXN6 97 aa12.42□□□□□ -0.42
SREBF1-204ENST00000395756 SPANXCQ9NY87 97 aa12.42□□□□□ -0.42
SREBF1-204ENST00000395756 A0A0B4J2C4 111 aa12.42□□□□□ -0.42
SREBF1-204ENST00000395756 KRTAP10-11P60412 298 aa12.41□□□□□ -0.42
SREBF1-204ENST00000395756 GAGE2AQ6NT46 116 aa12.41□□□□□ -0.42
SREBF1-204ENST00000395756 LINC00959A0A1B0GUT2 108 aa12.4□□□□□ -0.42
SREBF1-204ENST00000395756 H7C423 109 aa12.4□□□□□ -0.42
SREBF1-204ENST00000395756 LINC00269Q8N2A0 174 aa12.4□□□□□ -0.42
SREBF1-204ENST00000395756 LINC00308Q8TCZ7 52 aa12.4□□□□□ -0.42
SREBF1-204ENST00000395756 BAHCC1Q9P281 2608 aa12.4□□□□□ -0.42
SREBF1-204ENST00000395756 PFN2P35080 140 aa12.4□□□□□ -0.42
SREBF1-204ENST00000395756 COX7B2Q8TF08 81 aa12.4□□□□□ -0.42
SREBF1-204ENST00000395756 TRIAP1O43715 76 aa12.4□□□□□ -0.43
SREBF1-204ENST00000395756 ATP5G1P05496 136 aa12.4□□□□□ -0.43
SREBF1-204ENST00000395756 SOSTDC1Q6X4U4 206 aa12.4□□□□□ -0.43
SREBF1-204ENST00000395756 SPART-AS1P0CW21 52 aa12.39□□□□□ -0.43
SREBF1-204ENST00000395756 IGHV3OR16-9A0A0B4J2B5 98 aa12.39□□□□□ -0.43
SREBF1-204ENST00000395756 ANGP03950 147 aaKnown RBP12.39□□□□□ -0.43
SREBF1-204ENST00000395756 RPL13AP40429 203 aaKnown RBP12.39□□□□□ -0.43
SREBF1-204ENST00000395756 UBE2WQ96B02 151 aa12.39□□□□□ -0.43
SREBF1-204ENST00000395756 FAM19A3Q7Z5A8 133 aa12.38□□□□□ -0.43
SREBF1-204ENST00000395756 TENM3Q9P273 2699 aa12.38□□□□□ -0.43
SREBF1-204ENST00000395756 MIFP14174 115 aa12.37□□□□□ -0.43
SREBF1-204ENST00000395756 CYSRT1A8MQ03 144 aa12.37□□□□□ -0.43
SREBF1-204ENST00000395756 LINC00158P58513 81 aa12.37□□□□□ -0.43
SREBF1-204ENST00000395756 PRB2P02812 416 aaPredicted RBP12.37□□□□□ -0.43
SREBF1-204ENST00000395756 UQCRQO14949 82 aa12.36□□□□□ -0.43
SREBF1-204ENST00000395756 LINC01620Q4KN68 170 aa12.36□□□□□ -0.43
SREBF1-204ENST00000395756 CLEC2BQ92478 149 aa12.36□□□□□ -0.43
SREBF1-204ENST00000395756 hADV29S1A0JD25 119 aa12.36□□□□□ -0.43
SREBF1-204ENST00000395756 C6orf226Q5I0X4 101 aa12.36□□□□□ -0.43
SREBF1-204ENST00000395756 MIR7-3HGQ8N6C7 128 aa12.35□□□□□ -0.43
SREBF1-204ENST00000395756 ICOSQ9Y6W8 199 aa12.35□□□□□ -0.43
SREBF1-204ENST00000395756 A0A1B0GX51 115 aa12.35□□□□□ -0.43
SREBF1-204ENST00000395756 C2orf82Q6UX34 121 aa12.35□□□□□ -0.43
SREBF1-204ENST00000395756 SS18Q15532 418 aa12.35□□□□□ -0.43
SREBF1-204ENST00000395756 TIMM17BO60830 172 aa12.34□□□□□ -0.43
SREBF1-204ENST00000395756 LINC00526Q96FQ7 95 aa12.34□□□□□ -0.43
SREBF1-204ENST00000395756 DSCR8Q96T75 97 aa12.34□□□□□ -0.43
SREBF1-204ENST00000395756 C1orf43Q9BWL3 253 aa12.34□□□□□ -0.43
SREBF1-204ENST00000395756 NBEAL1Q6ZS30 2694 aa12.33□□□□□ -0.44
SREBF1-204ENST00000395756 A0A087WZ39 114 aa12.32□□□□□ -0.44
SREBF1-204ENST00000395756 CYSTM1Q9H1C7 97 aa12.32□□□□□ -0.44
SREBF1-204ENST00000395756 PKIGQ9Y2B9 76 aa12.32□□□□□ -0.44
SREBF1-204ENST00000395756 MGAM2Q2M2H8 2515 aa12.3□□□□□ -0.44
SREBF1-204ENST00000395756 OXTP01178 125 aa12.3□□□□□ -0.44
SREBF1-204ENST00000395756 ATXN8Q156A1 80 aa12.3□□□□□ -0.44
SREBF1-204ENST00000395756 A0A1B0GUV1 79 aa12.3□□□□□ -0.44
SREBF1-204ENST00000395756 REG3AQ06141 175 aa12.3□□□□□ -0.44
SREBF1-204ENST00000395756 TRBV7-7A0A0K0K1E9 115 aa12.29□□□□□ -0.44
SREBF1-204ENST00000395756 COX6CP09669 75 aa12.29□□□□□ -0.44
SREBF1-204ENST00000395756 TRBV30A0A0K0K1B3 111 aa12.29□□□□□ -0.44
SREBF1-204ENST00000395756 RPS28P62857 69 aaKnown RBP12.29□□□□□ -0.44
SREBF1-204ENST00000395756 CHCHD10Q8WYQ3 142 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-204ENST00000395756 TRBV10-2A0A0K0K1G8 114 aa12.28□□□□□ -0.44
SREBF1-204ENST00000395756 DPH3Q96FX2 82 aa12.28□□□□□ -0.44
SREBF1-204ENST00000395756 KLK12Q9UKR0 248 aa12.28□□□□□ -0.44
SREBF1-204ENST00000395756 MALP21145 153 aa12.27□□□□□ -0.44
SREBF1-204ENST00000395756 Q6ZTC4 211 aa12.27□□□□□ -0.45
SREBF1-204ENST00000395756 TRACP01848 142 aa12.27□□□□□ -0.45
SREBF1-204ENST00000395756 MRAPQ8TCY5 172 aa12.27□□□□□ -0.45
SREBF1-204ENST00000395756 SND1-IT1Q9HBX3 110 aa12.26□□□□□ -0.45
SREBF1-204ENST00000395756 F8WDY8 70 aa12.25□□□□□ -0.45
SREBF1-204ENST00000395756 COX7CP15954 63 aa12.25□□□□□ -0.45
SREBF1-204ENST00000395756 C9orf116Q5BN46 136 aaPredicted RBP12.25□□□□□ -0.45
SREBF1-204ENST00000395756 Q5XG85 94 aa12.24□□□□□ -0.45
SREBF1-204ENST00000395756 COX7A2LO14548 114 aa12.24□□□□□ -0.45
SREBF1-204ENST00000395756 CCL18P55774 89 aa12.23□□□□□ -0.45
SREBF1-204ENST00000395756 A0A0J9YWU9 116 aa12.22□□□□□ -0.45
SREBF1-204ENST00000395756 NANOS2P60321 138 aaKnown RBP12.22□□□□□ -0.45
SREBF1-204ENST00000395756 CMYA5Q8N3K9 4069 aa12.22□□□□□ -0.45
SREBF1-204ENST00000395756 LYPD5Q6UWN5 251 aa12.21□□□□□ -0.45
SREBF1-204ENST00000395756 LINC00337Q8N6G1 96 aa12.21□□□□□ -0.45
SREBF1-204ENST00000395756 COPS9Q8WXC6 57 aa12.21□□□□□ -0.45
SREBF1-204ENST00000395756 PRR3P79522 188 aaKnown RBP12.21□□□□□ -0.45
SREBF1-204ENST00000395756 KPRPQ5T749 579 aaPredicted RBP12.21□□□□□ -0.45
SREBF1-204ENST00000395756 CD164L2Q6UWJ8 174 aa12.21□□□□□ -0.45
SREBF1-204ENST00000395756 C6orf223Q8N319 242 aa12.21□□□□□ -0.46
SREBF1-204ENST00000395756 LELP1Q5T871 98 aa12.2□□□□□ -0.46
SREBF1-204ENST00000395756 SMCR5Q8TEV8 140 aa12.2□□□□□ -0.46
SREBF1-204ENST00000395756 IGKV2-28A0A075B6P5 120 aa12.2□□□□□ -0.46
SREBF1-204ENST00000395756 IGKV2D-28P01615 120 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms