RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CCL18P55774 89 aa10.25□□□□□ -0.77
SCAF11-204ENST00000395454 REG3AQ06141 175 aa10.25□□□□□ -0.77
SCAF11-204ENST00000395454 ESRGQ1W209 222 aa10.25□□□□□ -0.77
SCAF11-204ENST00000395454 CD164L2Q6UWJ8 174 aa10.25□□□□□ -0.77
SCAF11-204ENST00000395454 Q8N3U1 123 aa10.25□□□□□ -0.77
SCAF11-204ENST00000395454 PRO1854Q9UHT4 67 aa10.25□□□□□ -0.77
SCAF11-204ENST00000395454 APOMO95445 188 aa10.24□□□□□ -0.77
SCAF11-204ENST00000395454 TSPAN13O95857 204 aa10.24□□□□□ -0.77
SCAF11-204ENST00000395454 ANGP03950 147 aaKnown RBP10.23□□□□□ -0.77
SCAF11-204ENST00000395454 XCL1P47992 114 aa10.23□□□□□ -0.77
SCAF11-204ENST00000395454 C5orf38Q86SI9 138 aa10.22□□□□□ -0.77
SCAF11-204ENST00000395454 UBE2DNLQ8IWF7 75 aa10.22□□□□□ -0.77
SCAF11-204ENST00000395454 IGHV3-33P01772 117 aa10.21□□□□□ -0.77
SCAF11-204ENST00000395454 PRSS2P07478 247 aa10.21□□□□□ -0.77
SCAF11-204ENST00000395454 CLPSL2Q6UWE3 100 aa10.21□□□□□ -0.77
SCAF11-204ENST00000395454 Q8IZM0 81 aa10.21□□□□□ -0.77
SCAF11-204ENST00000395454 COPS9Q8WXC6 57 aa10.21□□□□□ -0.77
SCAF11-204ENST00000395454 CHCHD10Q8WYQ3 142 aaPredicted RBP10.21□□□□□ -0.77
SCAF11-204ENST00000395454 LINC00588Q9Y4M8 146 aa10.21□□□□□ -0.77
SCAF11-204ENST00000395454 DNAH1Q9P2D7 4330 aa10.21□□□□□ -0.78
SCAF11-204ENST00000395454 LINC00308Q8TCZ7 52 aa10.21□□□□□ -0.78
SCAF11-204ENST00000395454 KMT2AQ03164 3969 aa10.2□□□□□ -0.78
SCAF11-204ENST00000395454 FOXI1Q12951 378 aa10.19□□□□□ -0.78
SCAF11-204ENST00000395454 VPS13DQ5THJ4 4388 aa10.19□□□□□ -0.78
SCAF11-204ENST00000395454 COX7A2LO14548 114 aa10.19□□□□□ -0.78
SCAF11-204ENST00000395454 IBA57-AS1B1ANH7 110 aa10.18□□□□□ -0.78
SCAF11-204ENST00000395454 MEIG1Q5JSS6 88 aa10.18□□□□□ -0.78
SCAF11-204ENST00000395454 LYRM7Q5U5X0 104 aa10.18□□□□□ -0.78
SCAF11-204ENST00000395454 SOSTDC1Q6X4U4 206 aa10.18□□□□□ -0.78
SCAF11-204ENST00000395454 DAND5Q8N907 189 aa10.18□□□□□ -0.78
SCAF11-204ENST00000395454 LY6G6CO95867 125 aa10.17□□□□□ -0.78
SCAF11-204ENST00000395454 KIAA0087Q14695 138 aa10.17□□□□□ -0.78
SCAF11-204ENST00000395454 ENHOQ6UWT2 76 aa10.17□□□□□ -0.78
SCAF11-204ENST00000395454 TOMM7Q9P0U1 55 aa10.17□□□□□ -0.78
SCAF11-204ENST00000395454 TRAV8-4A0A0B4J246 113 aa10.16□□□□□ -0.78
SCAF11-204ENST00000395454 CXCL5P42830 114 aa10.16□□□□□ -0.78
SCAF11-204ENST00000395454 WFDC10BQ8IUB3 73 aa10.16□□□□□ -0.78
SCAF11-204ENST00000395454 ERG28Q9UKR5 140 aa10.16□□□□□ -0.78
SCAF11-204ENST00000395454 LINC00476Q8WZB0 136 aa10.15□□□□□ -0.78
SCAF11-204ENST00000395454 KLK12Q9UKR0 248 aa10.15□□□□□ -0.78
SCAF11-204ENST00000395454 KMT2CQ8NEZ4 4911 aaKnown RBP10.15□□□□□ -0.78
SCAF11-204ENST00000395454 UPK3BQ9BT76 320 aa10.15□□□□□ -0.79
SCAF11-204ENST00000395454 SACSQ9NZJ4 4579 aa10.14□□□□□ -0.79
SCAF11-204ENST00000395454 C6orf226Q5I0X4 101 aa10.14□□□□□ -0.79
SCAF11-204ENST00000395454 LINC01556Q5JQF7 62 aa10.14□□□□□ -0.79
SCAF11-204ENST00000395454 ALMS1Q8TCU4 4167 aa10.14□□□□□ -0.79
SCAF11-204ENST00000395454 IGLV10-54A0A075B6I4 117 aa10.13□□□□□ -0.79
SCAF11-204ENST00000395454 TRBV20-1A0A075B6N2 111 aa10.13□□□□□ -0.79
SCAF11-204ENST00000395454 TRBV30A0A0K0K1B3 111 aa10.13□□□□□ -0.79
SCAF11-204ENST00000395454 NPC2P61916 151 aa10.13□□□□□ -0.79
SCAF11-204ENST00000395454 HYDINQ4G0P3 5121 aa10.13□□□□□ -0.79
SCAF11-204ENST00000395454 MIR7-3HGQ8N6C7 128 aa10.13□□□□□ -0.79
SCAF11-204ENST00000395454 PRO0461Q9UI25 63 aa10.12□□□□□ -0.79
SCAF11-204ENST00000395454 A0A0U1RRA0 63 aa10.11□□□□□ -0.79
SCAF11-204ENST00000395454 GAGE12HA6NDE8 117 aa10.11□□□□□ -0.79
SCAF11-204ENST00000395454 F8W1H4 67 aa10.11□□□□□ -0.79
SCAF11-204ENST00000395454 H3BMG7 143 aa10.11□□□□□ -0.79
SCAF11-204ENST00000395454 KRTAP26-1Q6PEX3 210 aa10.11□□□□□ -0.79
SCAF11-204ENST00000395454 LOC107984156A0A0G2JMH3 177 aa10.11□□□□□ -0.79
SCAF11-204ENST00000395454 CRPP02741 224 aa10.11□□□□□ -0.79
SCAF11-204ENST00000395454 MALP21145 153 aa10.11□□□□□ -0.79
SCAF11-204ENST00000395454 ARL17AQ8IVW1 177 aa10.11□□□□□ -0.79
SCAF11-204ENST00000395454 DNAH10OSP0CZ25 163 aa10.1□□□□□ -0.79
SCAF11-204ENST00000395454 COX17Q14061 63 aa10.1□□□□□ -0.79
SCAF11-204ENST00000395454 UBE2WQ96B02 151 aa10.09□□□□□ -0.79
SCAF11-204ENST00000395454 TCL1BO95988 128 aa10.09□□□□□ -0.79
SCAF11-204ENST00000395454 LINC00158P58513 81 aa10.09□□□□□ -0.79
SCAF11-204ENST00000395454 CKS1BP61024 79 aa10.09□□□□□ -0.79
SCAF11-204ENST00000395454 C2orf82Q6UX34 121 aa10.09□□□□□ -0.79
SCAF11-204ENST00000395454 TRIAP1O43715 76 aa10.08□□□□□ -0.8
SCAF11-204ENST00000395454 RPL13AP40429 203 aaKnown RBP10.08□□□□□ -0.8
SCAF11-204ENST00000395454 CFAP161Q6P656 301 aa10.08□□□□□ -0.8
SCAF11-204ENST00000395454 LCE6AA0A183 80 aa10.07□□□□□ -0.8
SCAF11-204ENST00000395454 GVQW2A0A096LPI5 108 aaPredicted RBP10.06□□□□□ -0.8
SCAF11-204ENST00000395454 H7C2G1 150 aa10.06□□□□□ -0.8
SCAF11-204ENST00000395454 PSMB2P49721 201 aa10.06□□□□□ -0.8
SCAF11-204ENST00000395454 SPAG11BQ08648 103 aa10.06□□□□□ -0.8
SCAF11-204ENST00000395454 Q1RN00 199 aa10.06□□□□□ -0.8
SCAF11-204ENST00000395454 SND1-IT1Q9HBX3 110 aa10.06□□□□□ -0.8
SCAF11-204ENST00000395454 M0R2N4 97 aa10.05□□□□□ -0.8
SCAF11-204ENST00000395454 IGKV2-28A0A075B6P5 120 aa10.05□□□□□ -0.8
SCAF11-204ENST00000395454 IGKV2D-28P01615 120 aa10.05□□□□□ -0.8
SCAF11-204ENST00000395454 PFN2P35080 140 aa10.05□□□□□ -0.8
SCAF11-204ENST00000395454 OCIAD2Q56VL3 154 aa10.05□□□□□ -0.8
SCAF11-204ENST00000395454 TRAV13-2A0A0B4J235 113 aa10.04□□□□□ -0.8
SCAF11-204ENST00000395454 NBDYA0A0U1RRE5 68 aa10.04□□□□□ -0.8
SCAF11-204ENST00000395454 SCGB1C2P0DMR2 95 aa10.04□□□□□ -0.8
SCAF11-204ENST00000395454 LINC01600Q96MT4 127 aa10.04□□□□□ -0.8
SCAF11-204ENST00000395454 DNAH10Q8IVF4 4471 aa10.04□□□□□ -0.8
SCAF11-204ENST00000395454 NTN5Q8WTR8 489 aaPredicted RBP10.03□□□□□ -0.8
SCAF11-204ENST00000395454 KRTAP1-5Q9BYS1 174 aa10.03□□□□□ -0.8
SCAF11-204ENST00000395454 DNAH6Q9C0G6 4158 aa10.03□□□□□ -0.8
SCAF11-204ENST00000395454 M0QXV9 152 aa10.03□□□□□ -0.8
SCAF11-204ENST00000395454 COX6CP09669 75 aa10.03□□□□□ -0.8
SCAF11-204ENST00000395454 SMCPP49901 116 aaPredicted RBP10.03□□□□□ -0.8
SCAF11-204ENST00000395454 WFDC2Q14508 124 aa10.03□□□□□ -0.8
SCAF11-204ENST00000395454 TTC32Q5I0X7 151 aa10.03□□□□□ -0.8
SCAF11-204ENST00000395454 LINC00337Q8N6G1 96 aa10.02□□□□□ -0.81
SCAF11-204ENST00000395454 DNAH2Q9P225 4427 aa10.02□□□□□ -0.81
SCAF11-204ENST00000395454 ATXN8Q156A1 80 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms