RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 LST1O00453 97 aa12.82□□□□□ -0.36
SIL1-202ENST00000394817 XCL1P47992 114 aa12.82□□□□□ -0.36
SIL1-202ENST00000394817 LINC01561Q8N1V8 128 aa12.82□□□□□ -0.36
SIL1-202ENST00000394817 MIR7-3HGQ8N6C7 128 aa12.82□□□□□ -0.36
SIL1-202ENST00000394817 CLEC2BQ92478 149 aa12.82□□□□□ -0.36
SIL1-202ENST00000394817 CLPSL2Q6UWE3 100 aa12.81□□□□□ -0.36
SIL1-202ENST00000394817 DNAH3Q8TD57 4116 aa12.81□□□□□ -0.36
SIL1-202ENST00000394817 ANK2Q01484 3957 aa12.8□□□□□ -0.36
SIL1-202ENST00000394817 MRPL23Q16540 153 aaKnown RBP12.79□□□□□ -0.36
SIL1-202ENST00000394817 Q8IZM0 81 aa12.79□□□□□ -0.36
SIL1-202ENST00000394817 LINC00158P58513 81 aa12.78□□□□□ -0.36
SIL1-202ENST00000394817 LINC00269Q8N2A0 174 aa12.78□□□□□ -0.36
SIL1-202ENST00000394817 H3BT86 120 aa12.78□□□□□ -0.36
SIL1-202ENST00000394817 COX7A2LO14548 114 aa12.78□□□□□ -0.36
SIL1-202ENST00000394817 C6orf226Q5I0X4 101 aa12.77□□□□□ -0.37
SIL1-202ENST00000394817 SIGMAR1Q99720 223 aa12.77□□□□□ -0.37
SIL1-202ENST00000394817 TRAV13-2A0A0B4J235 113 aa12.76□□□□□ -0.37
SIL1-202ENST00000394817 EGFEM1PQ0D2K5 195 aa12.76□□□□□ -0.37
SIL1-202ENST00000394817 CD164L2Q6UWJ8 174 aa12.76□□□□□ -0.37
SIL1-202ENST00000394817 SND1-IT1Q9HBX3 110 aa12.76□□□□□ -0.37
SIL1-202ENST00000394817 ANGP03950 147 aaKnown RBP12.76□□□□□ -0.37
SIL1-202ENST00000394817 HTN3P15516 51 aa12.76□□□□□ -0.37
SIL1-202ENST00000394817 LELP1Q5T871 98 aa12.76□□□□□ -0.37
SIL1-202ENST00000394817 Q8N3U1 123 aa12.76□□□□□ -0.37
SIL1-202ENST00000394817 NTN5Q8WTR8 489 aaPredicted RBP12.76□□□□□ -0.37
SIL1-202ENST00000394817 CRPP02741 224 aa12.75□□□□□ -0.37
SIL1-202ENST00000394817 REG3AQ06141 175 aa12.75□□□□□ -0.37
SIL1-202ENST00000394817 IGKV2-28A0A075B6P5 120 aa12.74□□□□□ -0.37
SIL1-202ENST00000394817 IGKV2D-28P01615 120 aa12.74□□□□□ -0.37
SIL1-202ENST00000394817 CCL18P55774 89 aa12.74□□□□□ -0.37
SIL1-202ENST00000394817 C2orf82Q6UX34 121 aa12.74□□□□□ -0.37
SIL1-202ENST00000394817 CHCHD10Q8WYQ3 142 aaPredicted RBP12.74□□□□□ -0.37
SIL1-202ENST00000394817 CDIP1Q9H305 208 aa12.74□□□□□ -0.37
SIL1-202ENST00000394817 C11orf68Q9H3H3 251 aaKnown RBP12.74□□□□□ -0.37
SIL1-202ENST00000394817 PFN2P35080 140 aa12.73□□□□□ -0.37
SIL1-202ENST00000394817 LINC00337Q8N6G1 96 aa12.73□□□□□ -0.37
SIL1-202ENST00000394817 RPL28P46779 137 aaKnown RBP12.71□□□□□ -0.37
SIL1-202ENST00000394817 UBE2WQ96B02 151 aa12.71□□□□□ -0.37
SIL1-202ENST00000394817 CXCL5P42830 114 aa12.7□□□□□ -0.38
SIL1-202ENST00000394817 KIAA0087Q14695 138 aa12.7□□□□□ -0.38
SIL1-202ENST00000394817 NOTCH1P46531 2555 aa12.7□□□□□ -0.38
SIL1-202ENST00000394817 IGLV10-54A0A075B6I4 117 aa12.7□□□□□ -0.38
SIL1-202ENST00000394817 TEX49A0A1B0GTD5 131 aa12.7□□□□□ -0.38
SIL1-202ENST00000394817 RETNQ9HD89 108 aa12.69□□□□□ -0.38
SIL1-202ENST00000394817 SCGB1A1P11684 91 aa12.68□□□□□ -0.38
SIL1-202ENST00000394817 CKS1BP61024 79 aa12.68□□□□□ -0.38
SIL1-202ENST00000394817 TRACP01848 142 aa12.68□□□□□ -0.38
SIL1-202ENST00000394817 CFAP161Q6P656 301 aa12.67□□□□□ -0.38
SIL1-202ENST00000394817 PRR34Q9NV39 138 aa12.67□□□□□ -0.38
SIL1-202ENST00000394817 MALP21145 153 aa12.66□□□□□ -0.38
SIL1-202ENST00000394817 H3BNG1 76 aa12.66□□□□□ -0.38
SIL1-202ENST00000394817 COX17Q14061 63 aa12.66□□□□□ -0.38
SIL1-202ENST00000394817 LYPD5Q6UWN5 251 aa12.65□□□□□ -0.38
SIL1-202ENST00000394817 SMIM11BQ8TCY0 68 aa12.64□□□□□ -0.39
SIL1-202ENST00000394817 FAM218AQ96MZ4 157 aa12.64□□□□□ -0.39
SIL1-202ENST00000394817 NBEAL1Q6ZS30 2694 aa12.64□□□□□ -0.39
SIL1-202ENST00000394817 PRB2P02812 416 aaPredicted RBP12.63□□□□□ -0.39
SIL1-202ENST00000394817 XGP55808 180 aa12.62□□□□□ -0.39
SIL1-202ENST00000394817 DEFB121Q5J5C9 76 aa12.62□□□□□ -0.39
SIL1-202ENST00000394817 MDFIQ99750 246 aa12.62□□□□□ -0.39
SIL1-202ENST00000394817 KLK12Q9UKR0 248 aa12.62□□□□□ -0.39
SIL1-202ENST00000394817 KLK5Q9Y337 293 aaPredicted RBP12.62□□□□□ -0.39
SIL1-202ENST00000394817 TENM3Q9P273 2699 aa12.61□□□□□ -0.39
SIL1-202ENST00000394817 KPRPQ5T749 579 aaPredicted RBP12.6□□□□□ -0.39
SIL1-202ENST00000394817 ENHOQ6UWT2 76 aa12.6□□□□□ -0.39
SIL1-202ENST00000394817 TRAV8-4A0A0B4J246 113 aa12.6□□□□□ -0.39
SIL1-202ENST00000394817 Q6ZTC4 211 aa12.6□□□□□ -0.39
SIL1-202ENST00000394817 MT-ATP8P03928 68 aa12.59□□□□□ -0.39
SIL1-202ENST00000394817 NDUFC2O95298 119 aa12.58□□□□□ -0.39
SIL1-202ENST00000394817 SPAG11BQ08648 103 aa12.58□□□□□ -0.39
SIL1-202ENST00000394817 H0YGX0 51 aa12.58□□□□□ -0.4
SIL1-202ENST00000394817 OR13C6PQ8NH95 151 aa12.57□□□□□ -0.4
SIL1-202ENST00000394817 MUC7Q8TAX7 377 aa12.56□□□□□ -0.4
SIL1-202ENST00000394817 MGAM2Q2M2H8 2515 aa12.56□□□□□ -0.4
SIL1-202ENST00000394817 FAM240AA0A1B0GVK7 77 aa12.56□□□□□ -0.4
SIL1-202ENST00000394817 BAALC-AS2P0C853 105 aa12.56□□□□□ -0.4
SIL1-202ENST00000394817 C9orf116Q5BN46 136 aaPredicted RBP12.56□□□□□ -0.4
SIL1-202ENST00000394817 WFDC10BQ8IUB3 73 aa12.55□□□□□ -0.4
SIL1-202ENST00000394817 A0A087WYN8 130 aa12.54□□□□□ -0.4
SIL1-202ENST00000394817 A0A0J9YWU9 116 aa12.54□□□□□ -0.4
SIL1-202ENST00000394817 C6orf223Q8N319 242 aa12.54□□□□□ -0.4
SIL1-202ENST00000394817 C22orf24Q9Y442 160 aa12.54□□□□□ -0.4
SIL1-202ENST00000394817 C10orf25Q5T742 122 aa12.53□□□□□ -0.4
SIL1-202ENST00000394817 UNQ6190/PRO20217Q6UXQ8 127 aa12.53□□□□□ -0.4
SIL1-202ENST00000394817 Q9HAA7 133 aa12.53□□□□□ -0.4
SIL1-202ENST00000394817 K7EIL1 84 aa12.52□□□□□ -0.41
SIL1-202ENST00000394817 DNAL4O96015 105 aa12.52□□□□□ -0.41
SIL1-202ENST00000394817 NANOS2P60321 138 aaKnown RBP12.51□□□□□ -0.41
SIL1-202ENST00000394817 GVQW2A0A096LPI5 108 aaPredicted RBP12.5□□□□□ -0.41
SIL1-202ENST00000394817 PRR3P79522 188 aaKnown RBP12.5□□□□□ -0.41
SIL1-202ENST00000394817 LINC00526Q96FQ7 95 aa12.5□□□□□ -0.41
SIL1-202ENST00000394817 C11orf45Q8TAV5 145 aa12.49□□□□□ -0.41
SIL1-202ENST00000394817 TMEM126AQ9H061 195 aa12.49□□□□□ -0.41
SIL1-202ENST00000394817 DEFB131BA0A096LNP1 70 aa12.49□□□□□ -0.41
SIL1-202ENST00000394817 ESRGQ1W209 222 aa12.49□□□□□ -0.41
SIL1-202ENST00000394817 Q8NDZ9 215 aa12.49□□□□□ -0.41
SIL1-202ENST00000394817 KRTAP26-1Q6PEX3 210 aa12.48□□□□□ -0.41
SIL1-202ENST00000394817 LECT2O14960 151 aa12.47□□□□□ -0.41
SIL1-202ENST00000394817 MRAPQ8TCY5 172 aa12.47□□□□□ -0.41
SIL1-202ENST00000394817 SNCGO76070 127 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms