RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 TMEM256-PLSCR3K7ERE1 68 aa8.3□□□□□ -1.08
UBE2D3-209ENST00000394804 CELSR1Q9NYQ6 3014 aa8.3□□□□□ -1.08
UBE2D3-209ENST00000394804 CYSRT1A8MQ03 144 aa8.3□□□□□ -1.08
UBE2D3-209ENST00000394804 SLPIP03973 132 aa8.3□□□□□ -1.08
UBE2D3-209ENST00000394804 DEFB135Q30KP9 77 aa8.3□□□□□ -1.08
UBE2D3-209ENST00000394804 LINC00269Q8N2A0 174 aa8.3□□□□□ -1.08
UBE2D3-209ENST00000394804 DSCR8Q96T75 97 aa8.3□□□□□ -1.08
UBE2D3-209ENST00000394804 IGLV4-60A0A075B6I1 120 aa8.3□□□□□ -1.08
UBE2D3-209ENST00000394804 HAMPP81172 84 aa8.3□□□□□ -1.08
UBE2D3-209ENST00000394804 NCR3O14931 201 aa8.29□□□□□ -1.08
UBE2D3-209ENST00000394804 DEFB4AO15263 64 aa8.29□□□□□ -1.08
UBE2D3-209ENST00000394804 SPAG11BQ08648 103 aa8.29□□□□□ -1.08
UBE2D3-209ENST00000394804 A0A087WZ39 114 aa8.29□□□□□ -1.08
UBE2D3-209ENST00000394804 SMIM9A6NGZ8 99 aa8.29□□□□□ -1.08
UBE2D3-209ENST00000394804 SDIM1Q6ZPB5 146 aa8.29□□□□□ -1.08
UBE2D3-209ENST00000394804 FSHBP01225 129 aa8.29□□□□□ -1.08
UBE2D3-209ENST00000394804 IGLV1-51P01701 117 aa8.28□□□□□ -1.08
UBE2D3-209ENST00000394804 SOSTDC1Q6X4U4 206 aa8.28□□□□□ -1.08
UBE2D3-209ENST00000394804 CHCHD10Q8WYQ3 142 aaPredicted RBP8.28□□□□□ -1.08
UBE2D3-209ENST00000394804 SPART-AS1P0CW21 52 aa8.28□□□□□ -1.08
UBE2D3-209ENST00000394804 C3orf22Q8N5N4 141 aa8.28□□□□□ -1.08
UBE2D3-209ENST00000394804 FLNAP21333 2647 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-209ENST00000394804 REG3AQ06141 175 aa8.27□□□□□ -1.09
UBE2D3-209ENST00000394804 SHISA2Q6UWI4 295 aa8.27□□□□□ -1.09
UBE2D3-209ENST00000394804 LYRM9A8MSI8 78 aa8.27□□□□□ -1.09
UBE2D3-209ENST00000394804 EIF4EBP3O60516 100 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-209ENST00000394804 FHL2Q14192 279 aa8.27□□□□□ -1.09
UBE2D3-209ENST00000394804 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-209ENST00000394804 PDZD2O15018 2839 aa8.26□□□□□ -1.09
UBE2D3-209ENST00000394804 Q8IZM0 81 aa8.26□□□□□ -1.09
UBE2D3-209ENST00000394804 LINC00337Q8N6G1 96 aa8.26□□□□□ -1.09
UBE2D3-209ENST00000394804 TRBV7-7A0A0K0K1E9 115 aa8.26□□□□□ -1.09
UBE2D3-209ENST00000394804 ZANQ9Y493 2812 aa8.26□□□□□ -1.09
UBE2D3-209ENST00000394804 FAM110AQ9BQ89 295 aa8.25□□□□□ -1.09
UBE2D3-209ENST00000394804 KLK12Q9UKR0 248 aa8.25□□□□□ -1.09
UBE2D3-209ENST00000394804 CD164L2Q6UWJ8 174 aa8.25□□□□□ -1.09
UBE2D3-209ENST00000394804 A0A087WYN8 130 aa8.25□□□□□ -1.09
UBE2D3-209ENST00000394804 RBM3P98179 157 aaKnown RBP8.25□□□□□ -1.09
UBE2D3-209ENST00000394804 TEP1Q99973 2627 aaKnown RBP8.24□□□□□ -1.09
UBE2D3-209ENST00000394804 hADV29S1A0JD25 119 aa8.23□□□□□ -1.09
UBE2D3-209ENST00000394804 C6orf99Q4VX62 202 aa8.23□□□□□ -1.09
UBE2D3-209ENST00000394804 KIR2DL5BQ8NHK3 375 aa8.23□□□□□ -1.09
UBE2D3-209ENST00000394804 IGHV3OR16-9A0A0B4J2B5 98 aa8.23□□□□□ -1.09
UBE2D3-209ENST00000394804 F8P00451 2351 aa8.23□□□□□ -1.09
UBE2D3-209ENST00000394804 A0A096LNT2 108 aa8.23□□□□□ -1.09
UBE2D3-209ENST00000394804 RPL18AQ02543 176 aaKnown RBP8.23□□□□□ -1.09
UBE2D3-209ENST00000394804 ZNF469Q96JG9 3925 aaPredicted RBP8.23□□□□□ -1.09
UBE2D3-209ENST00000394804 H3BQ85 93 aa8.22□□□□□ -1.09
UBE2D3-209ENST00000394804 CAMK2N2Q96S95 79 aa8.22□□□□□ -1.09
UBE2D3-209ENST00000394804 J3KT08 172 aa8.22□□□□□ -1.09
UBE2D3-209ENST00000394804 LINC00482Q8N8I6 264 aa8.22□□□□□ -1.09
UBE2D3-209ENST00000394804 DEFB121Q5J5C9 76 aa8.21□□□□□ -1.09
UBE2D3-209ENST00000394804 DIRC1Q969H9 104 aa8.21□□□□□ -1.09
UBE2D3-209ENST00000394804 OTOGQ6ZRI0 2925 aa8.21□□□□□ -1.09
UBE2D3-209ENST00000394804 COX7CP15954 63 aa8.21□□□□□ -1.09
UBE2D3-209ENST00000394804 ATP5EP2Q5VTU8 51 aa8.21□□□□□ -1.09
UBE2D3-209ENST00000394804 Q6JHZ5 121 aa8.21□□□□□ -1.09
UBE2D3-209ENST00000394804 HILS1P60008 231 aa8.21□□□□□ -1.1
UBE2D3-209ENST00000394804 FAM218AQ96MZ4 157 aa8.21□□□□□ -1.1
UBE2D3-209ENST00000394804 COX17Q14061 63 aa8.21□□□□□ -1.1
UBE2D3-209ENST00000394804 FAM19A3Q7Z5A8 133 aa8.2□□□□□ -1.1
UBE2D3-209ENST00000394804 NKAPP1Q8N9T2 125 aa8.2□□□□□ -1.1
UBE2D3-209ENST00000394804 C16orf95Q9H693 158 aa8.2□□□□□ -1.1
UBE2D3-209ENST00000394804 SMR3AQ99954 134 aa8.19□□□□□ -1.1
UBE2D3-209ENST00000394804 A0A1B0GUV1 79 aa8.19□□□□□ -1.1
UBE2D3-209ENST00000394804 PDE6GP18545 87 aa8.19□□□□□ -1.1
UBE2D3-209ENST00000394804 TRAV23DV6A0A075B6W5 121 aa8.18□□□□□ -1.1
UBE2D3-209ENST00000394804 USP17L23D6RBM5 183 aa8.18□□□□□ -1.1
UBE2D3-209ENST00000394804 KLK5Q9Y337 293 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-209ENST00000394804 HIVEP1P15822 2718 aa8.18□□□□□ -1.1
UBE2D3-209ENST00000394804 AKAP9Q99996 3911 aa8.18□□□□□ -1.1
UBE2D3-209ENST00000394804 KRTAP1-3Q8IUG1 177 aa8.18□□□□□ -1.1
UBE2D3-209ENST00000394804 SERP2Q8N6R1 65 aa8.18□□□□□ -1.1
UBE2D3-209ENST00000394804 C1orf43Q9BWL3 253 aa8.18□□□□□ -1.1
UBE2D3-209ENST00000394804 FAM104AQ969W3 186 aa8.18□□□□□ -1.1
UBE2D3-209ENST00000394804 IGHV4-28A0A0C4DH34 117 aa8.17□□□□□ -1.1
UBE2D3-209ENST00000394804 CCKP06307 115 aa8.17□□□□□ -1.1
UBE2D3-209ENST00000394804 MIFP14174 115 aa8.17□□□□□ -1.1
UBE2D3-209ENST00000394804 LINC00526Q96FQ7 95 aa8.17□□□□□ -1.1
UBE2D3-209ENST00000394804 UPK3BQ9BT76 320 aa8.17□□□□□ -1.1
UBE2D3-209ENST00000394804 PRR3P79522 188 aaKnown RBP8.16□□□□□ -1.1
UBE2D3-209ENST00000394804 Q8N814 137 aa8.16□□□□□ -1.1
UBE2D3-209ENST00000394804 IL17DQ8TAD2 202 aa8.16□□□□□ -1.1
UBE2D3-209ENST00000394804 IGKV2D-24A0A075B6R9 120 aa8.16□□□□□ -1.1
UBE2D3-209ENST00000394804 COX7BP24311 80 aa8.16□□□□□ -1.1
UBE2D3-209ENST00000394804 ENHOQ6UWT2 76 aa8.16□□□□□ -1.1
UBE2D3-209ENST00000394804 LINC01600Q96MT4 127 aa8.16□□□□□ -1.1
UBE2D3-209ENST00000394804 PPDPFQ9H3Y8 114 aa8.16□□□□□ -1.1
UBE2D3-209ENST00000394804 NHLRC4P0CG21 123 aaPredicted RBP8.15□□□□□ -1.1
UBE2D3-209ENST00000394804 LINC01561Q8N1V8 128 aa8.15□□□□□ -1.1
UBE2D3-209ENST00000394804 MUC7Q8TAX7 377 aa8.15□□□□□ -1.1
UBE2D3-209ENST00000394804 LINC00846Q9NV44 126 aa8.15□□□□□ -1.1
UBE2D3-209ENST00000394804 IGKV2-28A0A075B6P5 120 aa8.15□□□□□ -1.11
UBE2D3-209ENST00000394804 NDUFC2O95298 119 aa8.15□□□□□ -1.11
UBE2D3-209ENST00000394804 IGKV2D-28P01615 120 aa8.15□□□□□ -1.11
UBE2D3-209ENST00000394804 C9orf116Q5BN46 136 aaPredicted RBP8.15□□□□□ -1.11
UBE2D3-209ENST00000394804 LELP1Q5T871 98 aa8.15□□□□□ -1.11
UBE2D3-209ENST00000394804 XAGE1AQ9HD64 81 aa8.15□□□□□ -1.11
UBE2D3-209ENST00000394804 HIGD2BQ4VC39 106 aa8.14□□□□□ -1.11
UBE2D3-209ENST00000394804 Q6ZQY7 126 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms