RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 ATP5EP2Q5VTU8 51 aa7.01□□□□□ -1.29
UBE2D3-208ENST00000394803 LINC00612Q8N6U2 182 aa7.01□□□□□ -1.29
UBE2D3-208ENST00000394803 PTPN13Q12923 2485 aa7.01□□□□□ -1.29
UBE2D3-208ENST00000394803 CFAP161Q6P656 301 aa7.01□□□□□ -1.29
UBE2D3-208ENST00000394803 KRTAP1-3Q8IUG1 177 aa7.01□□□□□ -1.29
UBE2D3-208ENST00000394803 SMIM20Q8N5G0 67 aa7.01□□□□□ -1.29
UBE2D3-208ENST00000394803 LINC01006Q8NI28 216 aa7.01□□□□□ -1.29
UBE2D3-208ENST00000394803 LINC00167Q96N53 147 aa7.01□□□□□ -1.29
UBE2D3-208ENST00000394803 C14orf132Q9NPU4 83 aa7.01□□□□□ -1.29
UBE2D3-208ENST00000394803 TMEM256-PLSCR3K7ERE1 68 aa7□□□□□ -1.29
UBE2D3-208ENST00000394803 RPL18AQ02543 176 aaKnown RBP7□□□□□ -1.29
UBE2D3-208ENST00000394803 PRO0255Q9UI72 69 aa7□□□□□ -1.29
UBE2D3-208ENST00000394803 H3BQ85 93 aa6.99□□□□□ -1.29
UBE2D3-208ENST00000394803 GYPEP15421 78 aa6.99□□□□□ -1.29
UBE2D3-208ENST00000394803 ESM1Q9NQ30 184 aa6.99□□□□□ -1.29
UBE2D3-208ENST00000394803 APCP25054 2843 aa6.99□□□□□ -1.29
UBE2D3-208ENST00000394803 CCKP06307 115 aa6.99□□□□□ -1.29
UBE2D3-208ENST00000394803 CRYGAP11844 174 aa6.99□□□□□ -1.29
UBE2D3-208ENST00000394803 XCL1P47992 114 aa6.99□□□□□ -1.29
UBE2D3-208ENST00000394803 LYRM9A8MSI8 78 aa6.98□□□□□ -1.29
UBE2D3-208ENST00000394803 DEFB130BP0DP73 79 aa6.98□□□□□ -1.29
UBE2D3-208ENST00000394803 DEFB130AP0DP74 79 aa6.98□□□□□ -1.29
UBE2D3-208ENST00000394803 CD164L2Q6UWJ8 174 aa6.98□□□□□ -1.29
UBE2D3-208ENST00000394803 WFDC10AQ9H1F0 79 aa6.98□□□□□ -1.29
UBE2D3-208ENST00000394803 IGHV4-28A0A0C4DH34 117 aa6.97□□□□□ -1.29
UBE2D3-208ENST00000394803 Q8N814 137 aa6.96□□□□□ -1.29
UBE2D3-208ENST00000394803 LINC00846Q9NV44 126 aa6.96□□□□□ -1.29
UBE2D3-208ENST00000394803 SERP2Q8N6R1 65 aa6.96□□□□□ -1.3
UBE2D3-208ENST00000394803 C11orf68Q9H3H3 251 aaKnown RBP6.96□□□□□ -1.3
UBE2D3-208ENST00000394803 NCR3O14931 201 aa6.95□□□□□ -1.3
UBE2D3-208ENST00000394803 ITPR2Q14571 2701 aa6.95□□□□□ -1.3
UBE2D3-208ENST00000394803 J3KT08 172 aa6.95□□□□□ -1.3
UBE2D3-208ENST00000394803 GHRHP01286 108 aa6.95□□□□□ -1.3
UBE2D3-208ENST00000394803 WFDC11Q8NEX6 87 aa6.95□□□□□ -1.3
UBE2D3-208ENST00000394803 UNC79Q9P2D8 2635 aa6.94□□□□□ -1.3
UBE2D3-208ENST00000394803 TRBV10-3A0A0K0K1G6 114 aa6.94□□□□□ -1.3
UBE2D3-208ENST00000394803 C2orf48Q96LS8 159 aa6.94□□□□□ -1.3
UBE2D3-208ENST00000394803 ZNF469Q96JG9 3925 aaPredicted RBP6.94□□□□□ -1.3
UBE2D3-208ENST00000394803 hADV29S1A0JD25 119 aa6.93□□□□□ -1.3
UBE2D3-208ENST00000394803 UBL5Q9BZL1 73 aa6.93□□□□□ -1.3
UBE2D3-208ENST00000394803 IGKV3D-7A0A0C4DH55 119 aa6.93□□□□□ -1.3
UBE2D3-208ENST00000394803 HILS1P60008 231 aa6.93□□□□□ -1.3
UBE2D3-208ENST00000394803 TMEM258P61165 79 aa6.93□□□□□ -1.3
UBE2D3-208ENST00000394803 CHCHD10Q8WYQ3 142 aaPredicted RBP6.93□□□□□ -1.3
UBE2D3-208ENST00000394803 USP17L23D6RBM5 183 aa6.92□□□□□ -1.3
UBE2D3-208ENST00000394803 SLPIP03973 132 aa6.92□□□□□ -1.3
UBE2D3-208ENST00000394803 RPS28P62857 69 aaKnown RBP6.92□□□□□ -1.3
UBE2D3-208ENST00000394803 MXRA5Q9NR99 2828 aa6.92□□□□□ -1.3
UBE2D3-208ENST00000394803 PDE6GP18545 87 aa6.92□□□□□ -1.3
UBE2D3-208ENST00000394803 REG3AQ06141 175 aa6.92□□□□□ -1.3
UBE2D3-208ENST00000394803 KIAA0087Q14695 138 aa6.92□□□□□ -1.3
UBE2D3-208ENST00000394803 C9orf129Q5T035 196 aaKnown RBP6.92□□□□□ -1.3
UBE2D3-208ENST00000394803 LINC00269Q8N2A0 174 aa6.92□□□□□ -1.3
UBE2D3-208ENST00000394803 X6R8D5 127 aa6.92□□□□□ -1.3
UBE2D3-208ENST00000394803 MYO9AB2RTY4 2548 aa6.92□□□□□ -1.3
UBE2D3-208ENST00000394803 ANGP03950 147 aaKnown RBP6.91□□□□□ -1.3
UBE2D3-208ENST00000394803 APOC4P55056 127 aa6.91□□□□□ -1.3
UBE2D3-208ENST00000394803 NAV2Q8IVL1 2488 aa6.91□□□□□ -1.3
UBE2D3-208ENST00000394803 PDZD2O15018 2839 aa6.91□□□□□ -1.3
UBE2D3-208ENST00000394803 ZNF561-AS1K7EIQ3 104 aa6.91□□□□□ -1.3
UBE2D3-208ENST00000394803 BCE1O60756 84 aa6.91□□□□□ -1.3
UBE2D3-208ENST00000394803 NANOS2P60321 138 aaKnown RBP6.91□□□□□ -1.3
UBE2D3-208ENST00000394803 AKAP9Q99996 3911 aa6.9□□□□□ -1.3
UBE2D3-208ENST00000394803 C9orf66Q5T8R8 295 aa6.9□□□□□ -1.3
UBE2D3-208ENST00000394803 CLPSL2Q6UWE3 100 aa6.9□□□□□ -1.3
UBE2D3-208ENST00000394803 LYPD5Q6UWN5 251 aa6.9□□□□□ -1.3
UBE2D3-208ENST00000394803 LINC00575Q6W349 94 aa6.89□□□□□ -1.31
UBE2D3-208ENST00000394803 C3orf56Q8N813 242 aa6.89□□□□□ -1.31
UBE2D3-208ENST00000394803 LINC00482Q8N8I6 264 aa6.89□□□□□ -1.31
UBE2D3-208ENST00000394803 CCDC168Q8NDH2 2452 aa6.89□□□□□ -1.31
UBE2D3-208ENST00000394803 DAD1P61803 113 aa6.89□□□□□ -1.31
UBE2D3-208ENST00000394803 RBM3P98179 157 aaKnown RBP6.89□□□□□ -1.31
UBE2D3-208ENST00000394803 C6orf99Q4VX62 202 aa6.89□□□□□ -1.31
UBE2D3-208ENST00000394803 ZANQ9Y493 2812 aa6.89□□□□□ -1.31
UBE2D3-208ENST00000394803 FLNBO75369 2602 aaKnown RBP6.88□□□□□ -1.31
UBE2D3-208ENST00000394803 LOC110117498A0A087WWA1 95 aa6.88□□□□□ -1.31
UBE2D3-208ENST00000394803 KRTAP1-1Q07627 177 aa6.88□□□□□ -1.31
UBE2D3-208ENST00000394803 WNK1Q9H4A3 2382 aa6.88□□□□□ -1.31
UBE2D3-208ENST00000394803 BAHCC1Q9P281 2608 aa6.88□□□□□ -1.31
UBE2D3-208ENST00000394803 A0A0J9YWU9 116 aa6.88□□□□□ -1.31
UBE2D3-208ENST00000394803 NDUFC2-KCTD14E9PQ53 114 aa6.88□□□□□ -1.31
UBE2D3-208ENST00000394803 IGHV4-30-4P0DP06 118 aa6.88□□□□□ -1.31
UBE2D3-208ENST00000394803 SPAG11BQ08648 103 aa6.88□□□□□ -1.31
UBE2D3-208ENST00000394803 LELP1Q5T871 98 aa6.87□□□□□ -1.31
UBE2D3-208ENST00000394803 NOTCH2Q04721 2471 aa6.87□□□□□ -1.31
UBE2D3-208ENST00000394803 SETXQ7Z333 2677 aaKnown RBP6.87□□□□□ -1.31
UBE2D3-208ENST00000394803 TEX15Q9BXT5 2789 aa6.87□□□□□ -1.31
UBE2D3-208ENST00000394803 GVQW2A0A096LPI5 108 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-208ENST00000394803 MIFP14174 115 aa6.86□□□□□ -1.31
UBE2D3-208ENST00000394803 C6orf223Q8N319 242 aa6.86□□□□□ -1.31
UBE2D3-208ENST00000394803 A0A096LPF7 62 aa6.86□□□□□ -1.31
UBE2D3-208ENST00000394803 DSCR8Q96T75 97 aa6.86□□□□□ -1.31
UBE2D3-208ENST00000394803 A0A087WVE0 104 aa6.85□□□□□ -1.31
UBE2D3-208ENST00000394803 LAMTOR3Q9UHA4 124 aa6.85□□□□□ -1.31
UBE2D3-208ENST00000394803 IGLV6-57P01721 117 aa6.85□□□□□ -1.31
UBE2D3-208ENST00000394803 PRR3P79522 188 aaKnown RBP6.85□□□□□ -1.31
UBE2D3-208ENST00000394803 Q6ZQT0 140 aa6.85□□□□□ -1.31
UBE2D3-208ENST00000394803 UPK3BQ9BT76 320 aa6.85□□□□□ -1.31
UBE2D3-208ENST00000394803 IGLV10-54A0A075B6I4 117 aa6.84□□□□□ -1.31
UBE2D3-208ENST00000394803 SPART-AS1P0CW21 52 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms