RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 HILS1P60008 231 aa15.81■□□□□ 0.12
RARA-202ENST00000394081 ZNF462Q96JM2 2506 aa15.81■□□□□ 0.12
RARA-202ENST00000394081 COX17Q14061 63 aa15.8■□□□□ 0.12
RARA-202ENST00000394081 GIG44P09565 113 aaPredicted RBP15.79■□□□□ 0.12
RARA-202ENST00000394081 Q5XG85 94 aa15.79■□□□□ 0.12
RARA-202ENST00000394081 ENHOQ6UWT2 76 aa15.79■□□□□ 0.12
RARA-202ENST00000394081 TRAV23DV6A0A075B6W5 121 aa15.78■□□□□ 0.12
RARA-202ENST00000394081 FAM19A1Q7Z5A9 133 aa15.77■□□□□ 0.12
RARA-202ENST00000394081 A0A1B0GUV1 79 aa15.77■□□□□ 0.11
RARA-202ENST00000394081 TENM4Q6N022 2769 aa15.75■□□□□ 0.11
RARA-202ENST00000394081 SETXQ7Z333 2677 aaKnown RBP15.75■□□□□ 0.11
RARA-202ENST00000394081 LOC110117498A0A087WWA1 95 aa15.74■□□□□ 0.11
RARA-202ENST00000394081 IGHV4-31P0DP07 118 aa15.74■□□□□ 0.11
RARA-202ENST00000394081 TRAV7A0A075B6U4 112 aa15.73■□□□□ 0.11
RARA-202ENST00000394081 EPM2AB3EWF7 344 aa15.73■□□□□ 0.11
RARA-202ENST00000394081 XCL1P47992 114 aa15.73■□□□□ 0.11
RARA-202ENST00000394081 WFDC9Q8NEX5 89 aa15.73■□□□□ 0.11
RARA-202ENST00000394081 FAM236DA0A1B0GTK5 79 aa15.72■□□□□ 0.11
RARA-202ENST00000394081 FAM236CP0DP71 79 aa15.72■□□□□ 0.11
RARA-202ENST00000394081 SPG11Q96JI7 2443 aa15.72■□□□□ 0.11
RARA-202ENST00000394081 C11orf68Q9H3H3 251 aaKnown RBP15.72■□□□□ 0.11
RARA-202ENST00000394081 C4orf26Q17RF5 130 aa15.71■□□□□ 0.11
RARA-202ENST00000394081 Q6ZQT0 140 aa15.71■□□□□ 0.11
RARA-202ENST00000394081 FLNBO75369 2602 aaKnown RBP15.71■□□□□ 0.11
RARA-202ENST00000394081 C20orf197Q8N268 126 aa15.71■□□□□ 0.11
RARA-202ENST00000394081 H3BQ85 93 aa15.7■□□□□ 0.1
RARA-202ENST00000394081 ZNF843Q8N446 348 aa15.7■□□□□ 0.1
RARA-202ENST00000394081 CSNK1G2-AS1Q8NCQ2 148 aa15.7■□□□□ 0.1
RARA-202ENST00000394081 MAPK1IP1LQ8NDC0 245 aa15.7■□□□□ 0.1
RARA-202ENST00000394081 IGHV4-28A0A0C4DH34 117 aa15.7■□□□□ 0.1
RARA-202ENST00000394081 ZNF561-AS1K7EIQ3 104 aa15.7■□□□□ 0.1
RARA-202ENST00000394081 RBM3P98179 157 aaKnown RBP15.7■□□□□ 0.1
RARA-202ENST00000394081 LINC00575Q6W349 94 aa15.7■□□□□ 0.1
RARA-202ENST00000394081 CCL24O00175 119 aa15.69■□□□□ 0.1
RARA-202ENST00000394081 SERP1Q9Y6X1 66 aa15.69■□□□□ 0.1
RARA-202ENST00000394081 C6orf223Q8N319 242 aa15.68■□□□□ 0.1
RARA-202ENST00000394081 MUC7Q8TAX7 377 aa15.68■□□□□ 0.1
RARA-202ENST00000394081 CELSR2Q9HCU4 2923 aa15.67■□□□□ 0.1
RARA-202ENST00000394081 PDE6GP18545 87 aa15.67■□□□□ 0.1
RARA-202ENST00000394081 KLKP1Q107X0 134 aa15.67■□□□□ 0.1
RARA-202ENST00000394081 KIAA0087Q14695 138 aa15.66■□□□□ 0.1
RARA-202ENST00000394081 LINC00482Q8N8I6 264 aa15.66■□□□□ 0.1
RARA-202ENST00000394081 PRR3P79522 188 aaKnown RBP15.66■□□□□ 0.1
RARA-202ENST00000394081 C6orf99Q4VX62 202 aa15.66■□□□□ 0.1
RARA-202ENST00000394081 H7BZZ5 65 aa15.65■□□□□ 0.1
RARA-202ENST00000394081 HRCT1Q6UXD1 115 aa15.65■□□□□ 0.1
RARA-202ENST00000394081 C2CD3Q4AC94 2353 aa15.64■□□□□ 0.09
RARA-202ENST00000394081 CXCL6P80162 114 aa15.63■□□□□ 0.09
RARA-202ENST00000394081 CD164L2Q6UWJ8 174 aa15.63■□□□□ 0.09
RARA-202ENST00000394081 LINC01547P58512 204 aaPredicted RBP15.63■□□□□ 0.09
RARA-202ENST00000394081 MRAPQ8TCY5 172 aa15.63■□□□□ 0.09
RARA-202ENST00000394081 PLA2G2AP14555 144 aa15.62■□□□□ 0.09
RARA-202ENST00000394081 C9orf66Q5T8R8 295 aa15.62■□□□□ 0.09
RARA-202ENST00000394081 LINC00612Q8N6U2 182 aa15.62■□□□□ 0.09
RARA-202ENST00000394081 C19orf73Q9NVV2 129 aa15.62■□□□□ 0.09
RARA-202ENST00000394081 MAP1AP78559 2803 aaPredicted RBP15.6■□□□□ 0.09
RARA-202ENST00000394081 RPL35AP18077 110 aaKnown RBP15.6■□□□□ 0.09
RARA-202ENST00000394081 GYPEP15421 78 aa15.59■□□□□ 0.09
RARA-202ENST00000394081 Q6ZVQ6 151 aa15.59■□□□□ 0.09
RARA-202ENST00000394081 DOPEY1Q5JWR5 2465 aa15.58■□□□□ 0.09
RARA-202ENST00000394081 CR1P17927 2039 aa15.58■□□□□ 0.08
RARA-202ENST00000394081 MYO18BQ8IUG5 2567 aa15.58■□□□□ 0.08
RARA-202ENST00000394081 LAMTOR3Q9UHA4 124 aa15.57■□□□□ 0.08
RARA-202ENST00000394081 MXRA5Q9NR99 2828 aa15.57■□□□□ 0.08
RARA-202ENST00000394081 RNASE1P07998 156 aaKnown RBP15.57■□□□□ 0.08
RARA-202ENST00000394081 IGLV1-51P01701 117 aa15.56■□□□□ 0.08
RARA-202ENST00000394081 NOTCH3Q9UM47 2321 aa15.55■□□□□ 0.08
RARA-202ENST00000394081 NDUFC1O43677 76 aa15.55■□□□□ 0.08
RARA-202ENST00000394081 WFDC10AQ9H1F0 79 aa15.55■□□□□ 0.08
RARA-202ENST00000394081 HECTD1Q9ULT8 2610 aa15.54■□□□□ 0.08
RARA-202ENST00000394081 IGLV6-57P01721 117 aa15.53■□□□□ 0.08
RARA-202ENST00000394081 FLNCQ14315 2725 aa15.53■□□□□ 0.08
RARA-202ENST00000394081 HAMPP81172 84 aa15.52■□□□□ 0.08
RARA-202ENST00000394081 Q8NDZ9 215 aa15.52■□□□□ 0.08
RARA-202ENST00000394081 CHCHD10Q8WYQ3 142 aaPredicted RBP15.52■□□□□ 0.08
RARA-202ENST00000394081 PRO0255Q9UI72 69 aa15.52■□□□□ 0.08
RARA-202ENST00000394081 USP9YO00507 2555 aaPredicted RBP15.52■□□□□ 0.08
RARA-202ENST00000394081 J3QKU1 62 aa15.52■□□□□ 0.07
RARA-202ENST00000394081 CLPSL2Q6UWE3 100 aa15.52■□□□□ 0.07
RARA-202ENST00000394081 ATP5EP56381 51 aaPredicted RBP15.51■□□□□ 0.07
RARA-202ENST00000394081 DEFB130BP0DP73 79 aa15.51■□□□□ 0.07
RARA-202ENST00000394081 DEFB130AP0DP74 79 aa15.51■□□□□ 0.07
RARA-202ENST00000394081 UBR5O95071 2799 aaPredicted RBP15.5■□□□□ 0.07
RARA-202ENST00000394081 LINC00269Q8N2A0 174 aa15.5■□□□□ 0.07
RARA-202ENST00000394081 ZANQ9Y493 2812 aa15.49■□□□□ 0.07
RARA-202ENST00000394081 ANKRD17O75179 2603 aaKnown RBP15.49■□□□□ 0.07
RARA-202ENST00000394081 MYO9AB2RTY4 2548 aa15.49■□□□□ 0.07
RARA-202ENST00000394081 SMIM26A0A096LP01 95 aa15.48■□□□□ 0.07
RARA-202ENST00000394081 TRAV10A0A0B4J240 114 aa15.48■□□□□ 0.07
RARA-202ENST00000394081 C9orf116Q5BN46 136 aaPredicted RBP15.48■□□□□ 0.07
RARA-202ENST00000394081 A0A0J9YWU9 116 aa15.47■□□□□ 0.07
RARA-202ENST00000394081 M0R2N4 97 aa15.47■□□□□ 0.07
RARA-202ENST00000394081 IGHV4-30-4P0DP06 118 aa15.47■□□□□ 0.07
RARA-202ENST00000394081 Q6ZQY7 126 aa15.47■□□□□ 0.07
RARA-202ENST00000394081 DNAJC9-AS1A6NH13 148 aa15.46■□□□□ 0.07
RARA-202ENST00000394081 REG3AQ06141 175 aa15.46■□□□□ 0.06
RARA-202ENST00000394081 PRO0628Q9UI54 55 aa15.46■□□□□ 0.06
RARA-202ENST00000394081 TRBV7-4A0A0J9YYF1 115 aa15.45■□□□□ 0.06
RARA-202ENST00000394081 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.45■□□□□ 0.06
RARA-202ENST00000394081 Q8N3U1 123 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms