RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 PKD1L3Q7Z443 1732 aa0.5□□□□□ -2.33
TRAJ39-201ENST00000390498 LRRIQ1Q96JM4 1722 aa0.5□□□□□ -2.33
TRAJ39-201ENST00000390498 TULP4Q9NRJ4 1543 aa0.49□□□□□ -2.33
TRAJ39-201ENST00000390498 TRBV7-4A0A0J9YYF1 115 aa0.49□□□□□ -2.33
TRAJ39-201ENST00000390498 A0A1B0GUT8 65 aa0.49□□□□□ -2.33
TRAJ39-201ENST00000390498 CEBPZOSA8MTT3 80 aa0.49□□□□□ -2.33
TRAJ39-201ENST00000390498 H3BUT2 72 aa0.49□□□□□ -2.33
TRAJ39-201ENST00000390498 IGLC2P0DOY2 106 aa0.49□□□□□ -2.33
TRAJ39-201ENST00000390498 IGLC3P0DOY3 106 aa0.49□□□□□ -2.33
TRAJ39-201ENST00000390498 KRTAP5-9P26371 169 aa0.49□□□□□ -2.33
TRAJ39-201ENST00000390498 FAM103A1Q9BTL3 118 aaKnown RBP0.49□□□□□ -2.33
TRAJ39-201ENST00000390498 KIF20BQ96Q89 1820 aa0.49□□□□□ -2.33
TRAJ39-201ENST00000390498 OBSCNQ5VST9 7968 aa0.49□□□□□ -2.33
TRAJ39-201ENST00000390498 PPRC1Q5VV67 1664 aaKnown RBP0.49□□□□□ -2.33
TRAJ39-201ENST00000390498 NKTRP30414 1462 aaKnown RBP0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 ZDBF2Q9HCK1 2354 aa0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 RGPD8O14715 1765 aaPredicted RBP0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 RGPD5Q99666 1765 aa0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 LRRC37AA6NMS7 1700 aa0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 A0A1B0GU69 56 aa0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 LINC00959A0A1B0GUT2 108 aa0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 COX6A2Q02221 97 aa0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 DEFB121Q5J5C9 76 aa0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 ATP5EP2Q5VTU8 51 aa0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 KRTAP5-4Q6L8H1 288 aa0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 C18orf32Q8TCD1 76 aa0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 TP53AIP1Q9HCN2 124 aa0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 SMCO4Q9NRQ5 59 aa0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 KIAA0556O60303 1618 aa0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 PAPPAQ13219 1627 aa0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 SETBP1Q9Y6X0 1596 aa0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 URB2Q14146 1524 aaKnown RBP0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 CCDC141Q6ZP82 1450 aa0.48□□□□□ -2.33
TRAJ39-201ENST00000390498 LTN1O94822 1766 aa0.47□□□□□ -2.33
TRAJ39-201ENST00000390498 NOTCH2Q04721 2471 aa0.47□□□□□ -2.33
TRAJ39-201ENST00000390498 MUC6Q6W4X9 2439 aa0.47□□□□□ -2.33
TRAJ39-201ENST00000390498 PIK3C2BO00750 1634 aa0.47□□□□□ -2.33
TRAJ39-201ENST00000390498 I3L2K1 104 aa0.47□□□□□ -2.33
TRAJ39-201ENST00000390498 PIGYQ3MUY2 71 aa0.47□□□□□ -2.33
TRAJ39-201ENST00000390498 KNTC1P50748 2209 aa0.47□□□□□ -2.33
TRAJ39-201ENST00000390498 DNMBPQ6XZF7 1577 aa0.47□□□□□ -2.33
TRAJ39-201ENST00000390498 CEP170BQ9Y4F5 1589 aaPredicted RBP0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 PDCD5O14737 125 aa0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 NDUFB1O75438 58 aa0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 CFDP00746 253 aaPredicted RBP0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 DEFB123Q8N688 67 aa0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 KRTAP4-4Q9BYR3 166 aa0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 KRTAP4-3Q9BYR4 195 aa0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 PRO0255Q9UI72 69 aa0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 SLIT1O75093 1534 aa0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 MAGI3Q5TCQ9 1506 aa0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 LRRC7Q96NW7 1537 aa0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 UGGT2Q9NYU1 1516 aa0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 RGPD2P0DJD1 1756 aa0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 CACNA1CQ13936 2221 aa0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 RGPD1P0DJD0 1748 aa0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 MYO5CQ9NQX4 1742 aa0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 IQGAP3Q86VI3 1631 aa0.46□□□□□ -2.34
TRAJ39-201ENST00000390498 JMJD1CQ15652 2540 aa0.45□□□□□ -2.34
TRAJ39-201ENST00000390498 MYO7AQ13402 2215 aa0.45□□□□□ -2.34
TRAJ39-201ENST00000390498 HELZ2Q9BYK8 2649 aaKnown RBP0.45□□□□□ -2.34
TRAJ39-201ENST00000390498 QSER1Q2KHR3 1735 aa0.45□□□□□ -2.34
TRAJ39-201ENST00000390498 UMAD1C9J7I0 102 aa0.45□□□□□ -2.34
TRAJ39-201ENST00000390498 SMIM13P0DJ93 91 aa0.45□□□□□ -2.34
TRAJ39-201ENST00000390498 DEFB112Q30KQ8 113 aa0.45□□□□□ -2.34
TRAJ39-201ENST00000390498 KRTAP5-7Q6L8G8 165 aa0.45□□□□□ -2.34
TRAJ39-201ENST00000390498 ASH1LQ9NR48 2969 aaKnown RBP0.45□□□□□ -2.34
TRAJ39-201ENST00000390498 BIVM-ERCC5R4GMW8 1640 aa0.45□□□□□ -2.34
TRAJ39-201ENST00000390498 NAV3Q8IVL0 2385 aa0.45□□□□□ -2.34
TRAJ39-201ENST00000390498 ANKRD36A6QL64 1941 aa0.44□□□□□ -2.34
TRAJ39-201ENST00000390498 ERICH3Q5RHP9 1530 aa0.44□□□□□ -2.34
TRAJ39-201ENST00000390498 ZC3H13Q5T200 1668 aaKnown RBP0.44□□□□□ -2.34
TRAJ39-201ENST00000390498 CADP27708 2225 aa0.44□□□□□ -2.34
TRAJ39-201ENST00000390498 IFI27P40305 119 aaPredicted RBP0.44□□□□□ -2.34
TRAJ39-201ENST00000390498 DEFA5Q01523 94 aa0.44□□□□□ -2.34
TRAJ39-201ENST00000390498 PRB3Q04118 309 aaPredicted RBP0.44□□□□□ -2.34
TRAJ39-201ENST00000390498 Q8IZM0 81 aa0.44□□□□□ -2.34
TRAJ39-201ENST00000390498 USMG5Q96IX5 58 aa0.44□□□□□ -2.34
TRAJ39-201ENST00000390498 GAFA1Q96PS6 74 aa0.44□□□□□ -2.34
TRAJ39-201ENST00000390498 USP32Q8NFA0 1604 aa0.44□□□□□ -2.34
TRAJ39-201ENST00000390498 CLIP1P30622 1438 aa0.44□□□□□ -2.34
TRAJ39-201ENST00000390498 SCN11AQ9UI33 1791 aa0.44□□□□□ -2.34
TRAJ39-201ENST00000390498 ADAMTS12P58397 1594 aa0.44□□□□□ -2.34
TRAJ39-201ENST00000390498 POLR1AO95602 1720 aaPredicted RBP0.44□□□□□ -2.34
TRAJ39-201ENST00000390498 DNAJC13O75165 2243 aa0.44□□□□□ -2.34
TRAJ39-201ENST00000390498 DUOX2Q9NRD8 1548 aa0.43□□□□□ -2.34
TRAJ39-201ENST00000390498 CD163L1Q9NR16 1453 aa0.43□□□□□ -2.34
TRAJ39-201ENST00000390498 A0A087WXM4 84 aa0.43□□□□□ -2.34
TRAJ39-201ENST00000390498 TRAV21A0A0B4J279 112 aa0.43□□□□□ -2.34
TRAJ39-201ENST00000390498 COX7BP24311 80 aa0.43□□□□□ -2.34
TRAJ39-201ENST00000390498 ZNF831Q5JPB2 1677 aa0.43□□□□□ -2.34
TRAJ39-201ENST00000390498 CFAP43Q8NDM7 1665 aa0.43□□□□□ -2.34
TRAJ39-201ENST00000390498 ASXL3Q9C0F0 2248 aa0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 ARFGEF2Q9Y6D5 1785 aa0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 TIAM2Q8IVF5 1701 aa0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 FAM208BQ5VWN6 2430 aa0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 ANKRD50Q9ULJ7 1429 aa0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 SPTY2D1-AS1A0A0U1RR47 76 aa0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 SMIM31A0A1B0GVY4 71 aa0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 K7EQZ3 153 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms