RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 LOC107984640A0A0U1RRK4 108 aa9.38□□□□□ -0.91
PTPRN2-203ENST00000389418 Q8N2B8 174 aa9.38□□□□□ -0.91
PTPRN2-203ENST00000389418 DHRS4-AS1Q9P1J3 65 aa9.37□□□□□ -0.91
PTPRN2-203ENST00000389418 IGIPA6NJ69 53 aa9.36□□□□□ -0.91
PTPRN2-203ENST00000389418 BPY2O14599 106 aa9.36□□□□□ -0.91
PTPRN2-203ENST00000389418 FAM19A5Q7Z5A7 132 aaPredicted RBP9.36□□□□□ -0.91
PTPRN2-203ENST00000389418 ZNF706Q9Y5V0 76 aaPredicted RBP9.36□□□□□ -0.91
PTPRN2-203ENST00000389418 BEAN1Q3B7T3 259 aa9.36□□□□□ -0.91
PTPRN2-203ENST00000389418 C1orf158Q8N1D5 194 aa9.36□□□□□ -0.91
PTPRN2-203ENST00000389418 CSDC2Q9Y534 153 aaKnown RBP9.36□□□□□ -0.91
PTPRN2-203ENST00000389418 TRAV23DV6A0A075B6W5 121 aa9.36□□□□□ -0.91
PTPRN2-203ENST00000389418 FRYQ5TBA9 3013 aa9.36□□□□□ -0.91
PTPRN2-203ENST00000389418 UBR5O95071 2799 aaPredicted RBP9.36□□□□□ -0.91
PTPRN2-203ENST00000389418 C6orf99Q4VX62 202 aa9.36□□□□□ -0.91
PTPRN2-203ENST00000389418 ATP5EP2Q5VTU8 51 aa9.36□□□□□ -0.91
PTPRN2-203ENST00000389418 Q6ZTC4 211 aa9.36□□□□□ -0.91
PTPRN2-203ENST00000389418 C14orf132Q9NPU4 83 aa9.35□□□□□ -0.91
PTPRN2-203ENST00000389418 H0Y9J4 135 aa9.34□□□□□ -0.91
PTPRN2-203ENST00000389418 TRIAP1O43715 76 aa9.34□□□□□ -0.91
PTPRN2-203ENST00000389418 IGKV2-28A0A075B6P5 120 aa9.33□□□□□ -0.92
PTPRN2-203ENST00000389418 IGKV2D-28P01615 120 aa9.33□□□□□ -0.92
PTPRN2-203ENST00000389418 FAM236AA0A1B0GUQ0 79 aa9.33□□□□□ -0.92
PTPRN2-203ENST00000389418 FAM236BA0A1B0GV22 79 aa9.33□□□□□ -0.92
PTPRN2-203ENST00000389418 DMXL2Q8TDJ6 3036 aa9.33□□□□□ -0.92
PTPRN2-203ENST00000389418 TEX49A0A1B0GTD5 131 aa9.33□□□□□ -0.92
PTPRN2-203ENST00000389418 F8WDY8 70 aa9.33□□□□□ -0.92
PTPRN2-203ENST00000389418 EGFEM1PQ0D2K5 195 aa9.33□□□□□ -0.92
PTPRN2-203ENST00000389418 LINC00242Q5T6M2 205 aa9.32□□□□□ -0.92
PTPRN2-203ENST00000389418 SLPIP03973 132 aa9.31□□□□□ -0.92
PTPRN2-203ENST00000389418 FHL2Q14192 279 aa9.31□□□□□ -0.92
PTPRN2-203ENST00000389418 PCSK5Q92824 1860 aa9.31□□□□□ -0.92
PTPRN2-203ENST00000389418 CHKB-CPT1BH3BT56 60 aa9.3□□□□□ -0.92
PTPRN2-203ENST00000389418 IGSF10Q6WRI0 2623 aa9.3□□□□□ -0.92
PTPRN2-203ENST00000389418 A0A096LNJ9 63 aa9.29□□□□□ -0.92
PTPRN2-203ENST00000389418 NHLRC4P0CG21 123 aaPredicted RBP9.29□□□□□ -0.92
PTPRN2-203ENST00000389418 POM121L12Q8N7R1 296 aa9.29□□□□□ -0.92
PTPRN2-203ENST00000389418 PPDPFQ9H3Y8 114 aa9.29□□□□□ -0.92
PTPRN2-203ENST00000389418 CYSRT1A8MQ03 144 aa9.29□□□□□ -0.92
PTPRN2-203ENST00000389418 A0A1B0GUV1 79 aa9.29□□□□□ -0.92
PTPRN2-203ENST00000389418 FLNCQ14315 2725 aa9.29□□□□□ -0.92
PTPRN2-203ENST00000389418 UPK3BQ9BT76 320 aa9.29□□□□□ -0.92
PTPRN2-203ENST00000389418 EYSQ5T1H1 3165 aa9.28□□□□□ -0.92
PTPRN2-203ENST00000389418 ATMQ13315 3056 aa9.28□□□□□ -0.92
PTPRN2-203ENST00000389418 MT-ATP8P03928 68 aa9.27□□□□□ -0.93
PTPRN2-203ENST00000389418 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.27□□□□□ -0.93
PTPRN2-203ENST00000389418 J3KT08 172 aa9.27□□□□□ -0.93
PTPRN2-203ENST00000389418 UNC79Q9P2D8 2635 aa9.27□□□□□ -0.93
PTPRN2-203ENST00000389418 LST1O00453 97 aa9.26□□□□□ -0.93
PTPRN2-203ENST00000389418 ZNF73O43830 326 aaPredicted RBP9.26□□□□□ -0.93
PTPRN2-203ENST00000389418 LINC01561Q8N1V8 128 aa9.26□□□□□ -0.93
PTPRN2-203ENST00000389418 RPL37AP8A6NKH3 93 aa9.26□□□□□ -0.93
PTPRN2-203ENST00000389418 LINC00694P0DN24 101 aa9.26□□□□□ -0.93
PTPRN2-203ENST00000389418 Q6ZQY7 126 aa9.26□□□□□ -0.93
PTPRN2-203ENST00000389418 SMIM1B2RUZ4 78 aa9.26□□□□□ -0.93
PTPRN2-203ENST00000389418 C9orf116Q5BN46 136 aaPredicted RBP9.26□□□□□ -0.93
PTPRN2-203ENST00000389418 AMELXQ99217 191 aa9.26□□□□□ -0.93
PTPRN2-203ENST00000389418 COL12A1Q99715 3063 aa9.26□□□□□ -0.93
PTPRN2-203ENST00000389418 CCKP06307 115 aa9.25□□□□□ -0.93
PTPRN2-203ENST00000389418 Q6ZSN1 163 aa9.25□□□□□ -0.93
PTPRN2-203ENST00000389418 DNAH14Q0VDD8 3507 aa9.25□□□□□ -0.93
PTPRN2-203ENST00000389418 IGLV4-60A0A075B6I1 120 aa9.25□□□□□ -0.93
PTPRN2-203ENST00000389418 ZZEF1O43149 2961 aa9.24□□□□□ -0.93
PTPRN2-203ENST00000389418 KRTAP24-1Q3LI83 254 aa9.24□□□□□ -0.93
PTPRN2-203ENST00000389418 WFDC9Q8NEX5 89 aa9.24□□□□□ -0.93
PTPRN2-203ENST00000389418 NDUFV3P56181 108 aaKnown RBP9.23□□□□□ -0.93
PTPRN2-203ENST00000389418 SMIM11BQ8TCY0 68 aa9.23□□□□□ -0.93
PTPRN2-203ENST00000389418 SPEGQ15772 3267 aa9.23□□□□□ -0.93
PTPRN2-203ENST00000389418 UNQ6190/PRO20217Q6UXQ8 127 aa9.22□□□□□ -0.93
PTPRN2-203ENST00000389418 C2orf48Q96LS8 159 aa9.22□□□□□ -0.93
PTPRN2-203ENST00000389418 FHL3Q13643 280 aa9.22□□□□□ -0.93
PTPRN2-203ENST00000389418 TSPEAR-AS2P59090 65 aa9.21□□□□□ -0.93
PTPRN2-203ENST00000389418 RPL28P46779 137 aaKnown RBP9.2□□□□□ -0.94
PTPRN2-203ENST00000389418 SCXQ7RTU7 201 aa9.2□□□□□ -0.94
PTPRN2-203ENST00000389418 WFDC10BQ8IUB3 73 aa9.2□□□□□ -0.94
PTPRN2-203ENST00000389418 IGKV4-1P06312 121 aa9.2□□□□□ -0.94
PTPRN2-203ENST00000389418 COX6A2Q02221 97 aa9.2□□□□□ -0.94
PTPRN2-203ENST00000389418 PLAC8L1A1L4L8 177 aa9.19□□□□□ -0.94
PTPRN2-203ENST00000389418 LYPD5Q6UWN5 251 aa9.19□□□□□ -0.94
PTPRN2-203ENST00000389418 NSD1Q96L73 2696 aaPredicted RBP9.19□□□□□ -0.94
PTPRN2-203ENST00000389418 PRR3P79522 188 aaKnown RBP9.19□□□□□ -0.94
PTPRN2-203ENST00000389418 IMUPQ9GZP8 106 aa9.19□□□□□ -0.94
PTPRN2-203ENST00000389418 SDIM1Q6ZPB5 146 aa9.19□□□□□ -0.94
PTPRN2-203ENST00000389418 CELA1Q9UNI1 258 aa9.19□□□□□ -0.94
PTPRN2-203ENST00000389418 NBEAQ8NFP9 2946 aa9.19□□□□□ -0.94
PTPRN2-203ENST00000389418 USP17L23D6RBM5 183 aa9.18□□□□□ -0.94
PTPRN2-203ENST00000389418 NDUFC2O95298 119 aa9.18□□□□□ -0.94
PTPRN2-203ENST00000389418 KIF25-AS1Q9Y6Z4 181 aa9.18□□□□□ -0.94
PTPRN2-203ENST00000389418 CFAP47Q6ZTR5 3102 aa9.18□□□□□ -0.94
PTPRN2-203ENST00000389418 NDUFC2-KCTD14E9PQ53 114 aa9.17□□□□□ -0.94
PTPRN2-203ENST00000389418 HRCT1Q6UXD1 115 aa9.17□□□□□ -0.94
PTPRN2-203ENST00000389418 Q9UF83 564 aa9.17□□□□□ -0.94
PTPRN2-203ENST00000389418 M0QXV9 152 aa9.17□□□□□ -0.94
PTPRN2-203ENST00000389418 SPINK6Q6UWN8 80 aa9.17□□□□□ -0.94
PTPRN2-203ENST00000389418 C11orf72Q8NBR9 251 aa9.17□□□□□ -0.94
PTPRN2-203ENST00000389418 KLK9Q2XQG4 91 aa9.16□□□□□ -0.94
PTPRN2-203ENST00000389418 FSHBP01225 129 aa9.15□□□□□ -0.94
PTPRN2-203ENST00000389418 FAM19A4Q96LR4 140 aa9.15□□□□□ -0.94
PTPRN2-203ENST00000389418 SEC61GP60059 68 aa9.15□□□□□ -0.95
PTPRN2-203ENST00000389418 ADAMTSL4-AS1Q5T5F5 129 aa9.15□□□□□ -0.95
PTPRN2-203ENST00000389418 UQCRQO14949 82 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms