RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 LINC00526Q96FQ7 95 aa13.58□□□□□ -0.24
CSPG5-202ENST00000383738 NIPBLQ6KC79 2804 aaeCLIP13.58□□□□□ -0.24
CSPG5-202ENST00000383738 TRBV6-5A0A0K0K1A5 114 aa13.57□□□□□ -0.24
CSPG5-202ENST00000383738 USP17L23D6RBM5 183 aa13.57□□□□□ -0.24
CSPG5-202ENST00000383738 A0A0U1RQV1 116 aa13.57□□□□□ -0.24
CSPG5-202ENST00000383738 FAM19A5Q7Z5A7 132 aaPredicted RBP13.57□□□□□ -0.24
CSPG5-202ENST00000383738 LINC00269Q8N2A0 174 aa13.57□□□□□ -0.24
CSPG5-202ENST00000383738 COX6A2Q02221 97 aa13.57□□□□□ -0.24
CSPG5-202ENST00000383738 H0YGX0 51 aa13.56□□□□□ -0.24
CSPG5-202ENST00000383738 COX7CP15954 63 aa13.56□□□□□ -0.24
CSPG5-202ENST00000383738 C1orf158Q8N1D5 194 aa13.56□□□□□ -0.24
CSPG5-202ENST00000383738 NHLRC4P0CG21 123 aaPredicted RBP13.55□□□□□ -0.24
CSPG5-202ENST00000383738 CCL18P55774 89 aa13.55□□□□□ -0.24
CSPG5-202ENST00000383738 APCP25054 2843 aa13.55□□□□□ -0.24
CSPG5-202ENST00000383738 DEFB131BA0A096LNP1 70 aa13.55□□□□□ -0.24
CSPG5-202ENST00000383738 C5orf47Q569G3 176 aa13.55□□□□□ -0.24
CSPG5-202ENST00000383738 UBE2D4Q9Y2X8 147 aa13.54□□□□□ -0.24
CSPG5-202ENST00000383738 SNURFQ9Y675 71 aa13.54□□□□□ -0.24
CSPG5-202ENST00000383738 Q8N2B8 174 aa13.54□□□□□ -0.24
CSPG5-202ENST00000383738 NDUFA1O15239 70 aa13.54□□□□□ -0.24
CSPG5-202ENST00000383738 MRPS36P82909 103 aaKnown RBP13.54□□□□□ -0.24
CSPG5-202ENST00000383738 DEFB105AQ8NG35 78 aa13.54□□□□□ -0.24
CSPG5-202ENST00000383738 Q6Q795 121 aa13.53□□□□□ -0.24
CSPG5-202ENST00000383738 Q6ZSN1 163 aa13.53□□□□□ -0.24
CSPG5-202ENST00000383738 HIGD2BQ4VC39 106 aa13.52□□□□□ -0.24
CSPG5-202ENST00000383738 SPANXCQ9NY87 97 aa13.52□□□□□ -0.24
CSPG5-202ENST00000383738 CXCL5P42830 114 aa13.52□□□□□ -0.25
CSPG5-202ENST00000383738 BRK1Q8WUW1 75 aa13.52□□□□□ -0.25
CSPG5-202ENST00000383738 SPANXDQ9BXN6 97 aa13.52□□□□□ -0.25
CSPG5-202ENST00000383738 MPLKIPQ8TAP9 179 aa13.51□□□□□ -0.25
CSPG5-202ENST00000383738 SMIM11BQ8TCY0 68 aa13.51□□□□□ -0.25
CSPG5-202ENST00000383738 C9orf85Q96MD7 179 aa13.51□□□□□ -0.25
CSPG5-202ENST00000383738 FBN2P35556 2912 aa13.51□□□□□ -0.25
CSPG5-202ENST00000383738 KIF25-AS1Q9Y6Z4 181 aa13.5□□□□□ -0.25
CSPG5-202ENST00000383738 TRBV10-1A0A0K0K1A3 114 aa13.5□□□□□ -0.25
CSPG5-202ENST00000383738 RPL18AQ02543 176 aaKnown RBP13.5□□□□□ -0.25
CSPG5-202ENST00000383738 UPK3BQ9BT76 320 aa13.5□□□□□ -0.25
CSPG5-202ENST00000383738 NANOS2P60321 138 aaKnown RBP13.5□□□□□ -0.25
CSPG5-202ENST00000383738 PRR3P79522 188 aaKnown RBP13.5□□□□□ -0.25
CSPG5-202ENST00000383738 EIF4EBP3O60516 100 aaPredicted RBP13.5□□□□□ -0.25
CSPG5-202ENST00000383738 LINC00315P59091 139 aa13.5□□□□□ -0.25
CSPG5-202ENST00000383738 SMIM9A6NGZ8 99 aa13.49□□□□□ -0.25
CSPG5-202ENST00000383738 LINC00242Q5T6M2 205 aa13.49□□□□□ -0.25
CSPG5-202ENST00000383738 CAMK2N2Q96S95 79 aa13.49□□□□□ -0.25
CSPG5-202ENST00000383738 HIVEP1P15822 2718 aa13.49□□□□□ -0.25
CSPG5-202ENST00000383738 A0A096LNT2 108 aa13.47□□□□□ -0.25
CSPG5-202ENST00000383738 PYGO1Q9Y3Y4 419 aa13.47□□□□□ -0.25
CSPG5-202ENST00000383738 SERP2Q8N6R1 65 aa13.47□□□□□ -0.25
CSPG5-202ENST00000383738 A0A087WYN8 130 aa13.47□□□□□ -0.25
CSPG5-202ENST00000383738 LINC01546A6NGU7 62 aa13.47□□□□□ -0.25
CSPG5-202ENST00000383738 A0A0J9YWU9 116 aa13.46□□□□□ -0.26
CSPG5-202ENST00000383738 IMUPQ9GZP8 106 aa13.45□□□□□ -0.26
CSPG5-202ENST00000383738 KIR2DL5BQ8NHK3 375 aa13.45□□□□□ -0.26
CSPG5-202ENST00000383738 CSDC2Q9Y534 153 aaKnown RBP13.44□□□□□ -0.26
CSPG5-202ENST00000383738 KRTAP24-1Q3LI83 254 aa13.44□□□□□ -0.26
CSPG5-202ENST00000383738 C16orf95Q9H693 158 aa13.44□□□□□ -0.26
CSPG5-202ENST00000383738 TRBV6-8A0A0A6YYG3 113 aa13.43□□□□□ -0.26
CSPG5-202ENST00000383738 FAM240AA0A1B0GVK7 77 aa13.43□□□□□ -0.26
CSPG5-202ENST00000383738 SMG1Q96Q15 3661 aaKnown RBP13.43□□□□□ -0.26
CSPG5-202ENST00000383738 LINC00846Q9NV44 126 aa13.43□□□□□ -0.26
CSPG5-202ENST00000383738 SPAG11BQ08648 103 aa13.42□□□□□ -0.26
CSPG5-202ENST00000383738 C6orf99Q4VX62 202 aa13.42□□□□□ -0.26
CSPG5-202ENST00000383738 HRNRQ86YZ3 2850 aaPredicted RBP13.42□□□□□ -0.26
CSPG5-202ENST00000383738 MIFP14174 115 aa13.42□□□□□ -0.26
CSPG5-202ENST00000383738 REG3AQ06141 175 aa13.42□□□□□ -0.26
CSPG5-202ENST00000383738 NKAPP1Q8N9T2 125 aa13.42□□□□□ -0.26
CSPG5-202ENST00000383738 LYRM9A8MSI8 78 aa13.42□□□□□ -0.26
CSPG5-202ENST00000383738 SMIM1B2RUZ4 78 aa13.42□□□□□ -0.26
CSPG5-202ENST00000383738 FSHBP01225 129 aa13.41□□□□□ -0.26
CSPG5-202ENST00000383738 KPRPQ5T749 579 aaPredicted RBP13.41□□□□□ -0.26
CSPG5-202ENST00000383738 CHCHD7Q9BUK0 85 aa13.41□□□□□ -0.26
CSPG5-202ENST00000383738 FAM19A1Q7Z5A9 133 aa13.41□□□□□ -0.26
CSPG5-202ENST00000383738 SBSPONQ8IVN8 264 aa13.41□□□□□ -0.26
CSPG5-202ENST00000383738 FAM236DA0A1B0GTK5 79 aa13.4□□□□□ -0.26
CSPG5-202ENST00000383738 FAM236CP0DP71 79 aa13.4□□□□□ -0.26
CSPG5-202ENST00000383738 JMJD7-PLA2G4BH0Y9G9 81 aa13.4□□□□□ -0.26
CSPG5-202ENST00000383738 M0R2N4 97 aa13.4□□□□□ -0.26
CSPG5-202ENST00000383738 FAM218AQ96MZ4 157 aa13.39□□□□□ -0.27
CSPG5-202ENST00000383738 AMELXQ99217 191 aa13.39□□□□□ -0.27
CSPG5-202ENST00000383738 XAGE1AQ9HD64 81 aa13.39□□□□□ -0.27
CSPG5-202ENST00000383738 TRBV6-4A0A1B0GX49 114 aa13.39□□□□□ -0.27
CSPG5-202ENST00000383738 IGKV2-24A0A0C4DH68 120 aa13.38□□□□□ -0.27
CSPG5-202ENST00000383738 Q6ZTC4 211 aa13.38□□□□□ -0.27
CSPG5-202ENST00000383738 KRTAP1-3Q8IUG1 177 aa13.38□□□□□ -0.27
CSPG5-202ENST00000383738 CHCHD10Q8WYQ3 142 aaPredicted RBP13.38□□□□□ -0.27
CSPG5-202ENST00000383738 TMEM256-PLSCR3K7ERE1 68 aa13.37□□□□□ -0.27
CSPG5-202ENST00000383738 A8MTW9 85 aa13.36□□□□□ -0.27
CSPG5-202ENST00000383738 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.36□□□□□ -0.27
CSPG5-202ENST00000383738 LINC00337Q8N6G1 96 aa13.36□□□□□ -0.27
CSPG5-202ENST00000383738 SOSTDC1Q6X4U4 206 aa13.35□□□□□ -0.27
CSPG5-202ENST00000383738 TIMM17BO60830 172 aa13.35□□□□□ -0.27
CSPG5-202ENST00000383738 TMEM258P61165 79 aa13.35□□□□□ -0.27
CSPG5-202ENST00000383738 ZNF575Q86XF7 245 aa13.35□□□□□ -0.27
CSPG5-202ENST00000383738 C9orf116Q5BN46 136 aaPredicted RBP13.35□□□□□ -0.27
CSPG5-202ENST00000383738 LRCOL1A6NCL2 159 aa13.34□□□□□ -0.27
CSPG5-202ENST00000383738 C4orf26Q17RF5 130 aa13.33□□□□□ -0.27
CSPG5-202ENST00000383738 SMCR5Q8TEV8 140 aa13.33□□□□□ -0.28
CSPG5-202ENST00000383738 TRBV7-7A0A0K0K1E9 115 aa13.33□□□□□ -0.28
CSPG5-202ENST00000383738 CDC42SE2Q9NRR3 84 aa13.33□□□□□ -0.28
CSPG5-202ENST00000383738 PRR4Q16378 134 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms