RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 SPINK8P0C7L1 97 aa10.35□□□□□ -0.75
SNRPB-201ENST00000381342 CHTF8P0CG12 524 aa10.35□□□□□ -0.75
SNRPB-201ENST00000381342 CHTOPQ9Y3Y2 248 aaKnown RBP10.35□□□□□ -0.75
SNRPB-201ENST00000381342 TRAV12-1A0A0B4J245 112 aa10.34□□□□□ -0.75
SNRPB-201ENST00000381342 C11orf86A6NJI1 115 aa10.34□□□□□ -0.75
SNRPB-201ENST00000381342 NDUFA1O15239 70 aa10.34□□□□□ -0.75
SNRPB-201ENST00000381342 ZNF22P17026 224 aaPredicted RBP10.34□□□□□ -0.75
SNRPB-201ENST00000381342 C10orf25Q5T742 122 aa10.34□□□□□ -0.75
SNRPB-201ENST00000381342 C2orf82Q6UX34 121 aa10.34□□□□□ -0.75
SNRPB-201ENST00000381342 SCXQ7RTU7 201 aa10.34□□□□□ -0.75
SNRPB-201ENST00000381342 PRSS2P07478 247 aa10.33□□□□□ -0.76
SNRPB-201ENST00000381342 UNQ6190/PRO20217Q6UXQ8 127 aa10.33□□□□□ -0.76
SNRPB-201ENST00000381342 Q8IZM0 81 aa10.33□□□□□ -0.76
SNRPB-201ENST00000381342 MAP1LC3CQ9BXW4 147 aa10.33□□□□□ -0.76
SNRPB-201ENST00000381342 A0A096LNI7 61 aa10.32□□□□□ -0.76
SNRPB-201ENST00000381342 IGKV2-24A0A0C4DH68 120 aa10.32□□□□□ -0.76
SNRPB-201ENST00000381342 H3BRM9 83 aa10.32□□□□□ -0.76
SNRPB-201ENST00000381342 C3orf79P0CE67 100 aa10.32□□□□□ -0.76
SNRPB-201ENST00000381342 MRPL35Q9NZE8 188 aaKnown RBP10.32□□□□□ -0.76
SNRPB-201ENST00000381342 F8WDY8 70 aa10.31□□□□□ -0.76
SNRPB-201ENST00000381342 SYS1-DBNDD2H3BUS1 97 aa10.31□□□□□ -0.76
SNRPB-201ENST00000381342 KRTDAPP60985 99 aa10.31□□□□□ -0.76
SNRPB-201ENST00000381342 CIRBPQ14011 172 aaKnown RBP10.31□□□□□ -0.76
SNRPB-201ENST00000381342 LINC00528Q8N1L1 170 aa10.31□□□□□ -0.76
SNRPB-201ENST00000381342 CIRBP-AS1Q8TBR5 109 aa10.31□□□□□ -0.76
SNRPB-201ENST00000381342 SPACA4Q8TDM5 124 aa10.31□□□□□ -0.76
SNRPB-201ENST00000381342 C6orf48Q9UBA6 75 aa10.31□□□□□ -0.76
SNRPB-201ENST00000381342 ABCA13Q86UQ4 5058 aa10.31□□□□□ -0.76
SNRPB-201ENST00000381342 F8VRH5 84 aa10.3□□□□□ -0.76
SNRPB-201ENST00000381342 AKR1D1P51857 326 aa10.3□□□□□ -0.76
SNRPB-201ENST00000381342 ODF1Q14990 250 aa10.3□□□□□ -0.76
SNRPB-201ENST00000381342 TMEM170BQ5T4T1 132 aa10.3□□□□□ -0.76
SNRPB-201ENST00000381342 PET117Q6UWS5 81 aa10.3□□□□□ -0.76
SNRPB-201ENST00000381342 COX7B2Q8TF08 81 aa10.3□□□□□ -0.76
SNRPB-201ENST00000381342 LOC107984640A0A0U1RRK4 108 aa10.29□□□□□ -0.76
SNRPB-201ENST00000381342 CKS1BP61024 79 aa10.29□□□□□ -0.76
SNRPB-201ENST00000381342 RPL18AQ02543 176 aaKnown RBP10.29□□□□□ -0.76
SNRPB-201ENST00000381342 RNF151Q2KHN1 245 aa10.29□□□□□ -0.76
SNRPB-201ENST00000381342 C6orf226Q5I0X4 101 aa10.29□□□□□ -0.76
SNRPB-201ENST00000381342 PKIGQ9Y2B9 76 aa10.29□□□□□ -0.76
SNRPB-201ENST00000381342 MAJINQ3KP22 176 aa10.28□□□□□ -0.76
SNRPB-201ENST00000381342 IGLV5-39A0A0G2JS06 123 aa10.27□□□□□ -0.77
SNRPB-201ENST00000381342 TRBV30A0A0K0K1B3 111 aa10.27□□□□□ -0.77
SNRPB-201ENST00000381342 C20orf202A1L168 122 aa10.27□□□□□ -0.77
SNRPB-201ENST00000381342 GAGE2BQ13066 116 aa10.27□□□□□ -0.77
SNRPB-201ENST00000381342 JOSD1Q15040 202 aaPredicted RBP10.27□□□□□ -0.77
SNRPB-201ENST00000381342 LINC01545Q5VT33 79 aa10.27□□□□□ -0.77
SNRPB-201ENST00000381342 DPH3Q96FX2 82 aa10.27□□□□□ -0.77
SNRPB-201ENST00000381342 FAT1Q14517 4588 aa10.26□□□□□ -0.77
SNRPB-201ENST00000381342 PTTG1IPP53801 180 aa10.26□□□□□ -0.77
SNRPB-201ENST00000381342 C9orf116Q5BN46 136 aaPredicted RBP10.26□□□□□ -0.77
SNRPB-201ENST00000381342 PMCHL2Q9BQD1 86 aa10.26□□□□□ -0.77
SNRPB-201ENST00000381342 A0A087WYN8 130 aa10.25□□□□□ -0.77
SNRPB-201ENST00000381342 CXCL5P42830 114 aa10.25□□□□□ -0.77
SNRPB-201ENST00000381342 TMEM223A0PJW6 202 aa10.24□□□□□ -0.77
SNRPB-201ENST00000381342 PYY3Q5JQD4 70 aa10.24□□□□□ -0.77
SNRPB-201ENST00000381342 Q6ZRP5 223 aa10.24□□□□□ -0.77
SNRPB-201ENST00000381342 SCGB1D1O95968 90 aa10.23□□□□□ -0.77
SNRPB-201ENST00000381342 TLX1NBP0CAT3 122 aa10.23□□□□□ -0.77
SNRPB-201ENST00000381342 SMIM6P0DI80 62 aa10.23□□□□□ -0.77
SNRPB-201ENST00000381342 PLNP26678 52 aa10.23□□□□□ -0.77
SNRPB-201ENST00000381342 STPG4Q8N801 248 aa10.23□□□□□ -0.77
SNRPB-201ENST00000381342 LINC00474Q9P2X8 69 aa10.23□□□□□ -0.77
SNRPB-201ENST00000381342 DPM2O94777 84 aa10.22□□□□□ -0.77
SNRPB-201ENST00000381342 PLAC8Q9NZF1 115 aa10.22□□□□□ -0.77
SNRPB-201ENST00000381342 NDUFC2-KCTD14E9PQ53 114 aa10.21□□□□□ -0.77
SNRPB-201ENST00000381342 GAGE2EQ4V326 116 aa10.21□□□□□ -0.77
SNRPB-201ENST00000381342 GAGE2DQ9UEU5 116 aa10.21□□□□□ -0.77
SNRPB-201ENST00000381342 IGKCP01834 107 aa10.2□□□□□ -0.78
SNRPB-201ENST00000381342 VPS13BQ7Z7G8 4022 aa10.2□□□□□ -0.78
SNRPB-201ENST00000381342 J3QL48 77 aa10.19□□□□□ -0.78
SNRPB-201ENST00000381342 RPL37AP61513 92 aaKnown RBP10.18□□□□□ -0.78
SNRPB-201ENST00000381342 A0A1W2PNN7 141 aa10.17□□□□□ -0.78
SNRPB-201ENST00000381342 FAM168BA1KXE4 195 aa10.16□□□□□ -0.78
SNRPB-201ENST00000381342 C9orf129Q5T035 196 aaKnown RBP10.16□□□□□ -0.78
SNRPB-201ENST00000381342 ZNF625Q96I27 306 aaPredicted RBP10.16□□□□□ -0.78
SNRPB-201ENST00000381342 TSPEAR-AS2P59090 65 aa10.15□□□□□ -0.78
SNRPB-201ENST00000381342 PFN2P35080 140 aa10.14□□□□□ -0.79
SNRPB-201ENST00000381342 HERVK_113P61574 105 aa10.14□□□□□ -0.79
SNRPB-201ENST00000381342 FAM19A5Q7Z5A7 132 aaPredicted RBP10.14□□□□□ -0.79
SNRPB-201ENST00000381342 ATOH7Q8N100 152 aa10.14□□□□□ -0.79
SNRPB-201ENST00000381342 XAGE1AQ9HD64 81 aa10.14□□□□□ -0.79
SNRPB-201ENST00000381342 LEPROTO15243 131 aa10.13□□□□□ -0.79
SNRPB-201ENST00000381342 SFTA2Q6UW10 78 aa10.13□□□□□ -0.79
SNRPB-201ENST00000381342 ERG28Q9UKR5 140 aa10.13□□□□□ -0.79
SNRPB-201ENST00000381342 SRRM2Q9UQ35 2752 aaKnown RBP10.13□□□□□ -0.79
SNRPB-201ENST00000381342 LINC00518Q8N0U6 118 aa10.12□□□□□ -0.79
SNRPB-201ENST00000381342 C7orf33Q8WU49 177 aa10.12□□□□□ -0.79
SNRPB-201ENST00000381342 PLEKHB2Q96CS7 222 aa10.12□□□□□ -0.79
SNRPB-201ENST00000381342 FLG2Q5D862 2391 aaPredicted RBP10.11□□□□□ -0.79
SNRPB-201ENST00000381342 HSBP1L1C9JCN9 74 aa10.11□□□□□ -0.79
SNRPB-201ENST00000381342 KRTAP10-4P60372 401 aaPredicted RBP10.11□□□□□ -0.79
SNRPB-201ENST00000381342 KRTAP7-1Q8IUC3 87 aa10.11□□□□□ -0.79
SNRPB-201ENST00000381342 C12orf57Q99622 126 aa10.11□□□□□ -0.79
SNRPB-201ENST00000381342 VAMP8Q9BV40 100 aa10.11□□□□□ -0.79
SNRPB-201ENST00000381342 NDUFA12Q9UI09 145 aa10.11□□□□□ -0.79
SNRPB-201ENST00000381342 J3QQQ9 107 aa10.1□□□□□ -0.79
SNRPB-201ENST00000381342 S100A12P80511 92 aa10.1□□□□□ -0.79
SNRPB-201ENST00000381342 PHF5AQ7RTV0 110 aaKnown RBP10.1□□□□□ -0.79
SNRPB-201ENST00000381342 KRTAP29-1A8MX34 341 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms