RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 C6orf226Q5I0X4 101 aa9.82□□□□□ -0.84
SDC1-202ENST00000381150 NTM-AS1Q6ZSK4 140 aa9.82□□□□□ -0.84
SDC1-202ENST00000381150 LINC01561Q8N1V8 128 aa9.82□□□□□ -0.84
SDC1-202ENST00000381150 CCL18P55774 89 aa9.82□□□□□ -0.84
SDC1-202ENST00000381150 WFDC11Q8NEX6 87 aa9.81□□□□□ -0.84
SDC1-202ENST00000381150 PDZD2O15018 2839 aa9.81□□□□□ -0.84
SDC1-202ENST00000381150 RPL28P46779 137 aaKnown RBP9.81□□□□□ -0.84
SDC1-202ENST00000381150 STHQ8IWL8 128 aa9.81□□□□□ -0.84
SDC1-202ENST00000381150 TMEM243Q9BU79 118 aa9.81□□□□□ -0.84
SDC1-202ENST00000381150 CDC42SE2Q9NRR3 84 aa9.81□□□□□ -0.84
SDC1-202ENST00000381150 SETXQ7Z333 2677 aaKnown RBP9.8□□□□□ -0.84
SDC1-202ENST00000381150 IGLV5-45A0A087WSX0 123 aa9.8□□□□□ -0.84
SDC1-202ENST00000381150 FAM222AQ5U5X8 452 aa9.8□□□□□ -0.84
SDC1-202ENST00000381150 TMEM86BQ8N661 226 aa9.8□□□□□ -0.84
SDC1-202ENST00000381150 ORMDL1Q9P0S3 153 aa9.8□□□□□ -0.84
SDC1-202ENST00000381150 OXTP01178 125 aa9.79□□□□□ -0.84
SDC1-202ENST00000381150 XCL1P47992 114 aa9.79□□□□□ -0.84
SDC1-202ENST00000381150 TMEM258P61165 79 aa9.79□□□□□ -0.84
SDC1-202ENST00000381150 PLA2G2AP14555 144 aa9.79□□□□□ -0.84
SDC1-202ENST00000381150 K7EQD1 137 aa9.78□□□□□ -0.84
SDC1-202ENST00000381150 HAMPP81172 84 aa9.78□□□□□ -0.84
SDC1-202ENST00000381150 FHL2Q14192 279 aa9.78□□□□□ -0.84
SDC1-202ENST00000381150 DEFB114Q30KQ6 69 aa9.78□□□□□ -0.84
SDC1-202ENST00000381150 MAP6D1Q9H9H5 199 aa9.78□□□□□ -0.84
SDC1-202ENST00000381150 A0A096LPF7 62 aa9.78□□□□□ -0.84
SDC1-202ENST00000381150 TRGV4A0A0C4DH28 118 aa9.78□□□□□ -0.84
SDC1-202ENST00000381150 C11orf72Q8NBR9 251 aa9.77□□□□□ -0.85
SDC1-202ENST00000381150 F5H768 121 aa9.77□□□□□ -0.85
SDC1-202ENST00000381150 ESM1Q9NQ30 184 aa9.77□□□□□ -0.85
SDC1-202ENST00000381150 H0YGX0 51 aa9.76□□□□□ -0.85
SDC1-202ENST00000381150 Q6JHZ5 121 aa9.76□□□□□ -0.85
SDC1-202ENST00000381150 IGLV4-60A0A075B6I1 120 aa9.76□□□□□ -0.85
SDC1-202ENST00000381150 DNAJC9-AS1A6NH13 148 aa9.76□□□□□ -0.85
SDC1-202ENST00000381150 RPL35AP18077 110 aaKnown RBP9.76□□□□□ -0.85
SDC1-202ENST00000381150 OVOL2Q9BRP0 275 aa9.76□□□□□ -0.85
SDC1-202ENST00000381150 KRTAP1-1Q07627 177 aa9.76□□□□□ -0.85
SDC1-202ENST00000381150 SNURFQ9Y675 71 aa9.75□□□□□ -0.85
SDC1-202ENST00000381150 FLNAP21333 2647 aaKnown RBP9.75□□□□□ -0.85
SDC1-202ENST00000381150 PF4P02776 101 aa9.75□□□□□ -0.85
SDC1-202ENST00000381150 ANK3Q12955 4377 aaKnown RBP9.74□□□□□ -0.85
SDC1-202ENST00000381150 LAMTOR3Q9UHA4 124 aa9.74□□□□□ -0.85
SDC1-202ENST00000381150 UBL5Q9BZL1 73 aa9.73□□□□□ -0.85
SDC1-202ENST00000381150 DEFB130BP0DP73 79 aa9.73□□□□□ -0.85
SDC1-202ENST00000381150 DEFB130AP0DP74 79 aa9.73□□□□□ -0.85
SDC1-202ENST00000381150 UPK3BQ9BT76 320 aa9.73□□□□□ -0.85
SDC1-202ENST00000381150 IGLV10-54A0A075B6I4 117 aa9.71□□□□□ -0.85
SDC1-202ENST00000381150 RPS28P62857 69 aaKnown RBP9.71□□□□□ -0.85
SDC1-202ENST00000381150 ODF3L2Q3SX64 289 aa9.71□□□□□ -0.85
SDC1-202ENST00000381150 SCXQ7RTU7 201 aa9.71□□□□□ -0.85
SDC1-202ENST00000381150 WFDC10AQ9H1F0 79 aa9.71□□□□□ -0.85
SDC1-202ENST00000381150 C1orf158Q8N1D5 194 aa9.7□□□□□ -0.86
SDC1-202ENST00000381150 C1orf43Q9BWL3 253 aa9.7□□□□□ -0.86
SDC1-202ENST00000381150 F8P00451 2351 aa9.7□□□□□ -0.86
SDC1-202ENST00000381150 TRAV25A0A0B4J276 109 aa9.69□□□□□ -0.86
SDC1-202ENST00000381150 CCKP06307 115 aa9.69□□□□□ -0.86
SDC1-202ENST00000381150 ITPR2Q14571 2701 aa9.69□□□□□ -0.86
SDC1-202ENST00000381150 CCL24O00175 119 aa9.68□□□□□ -0.86
SDC1-202ENST00000381150 C9orf116Q5BN46 136 aaPredicted RBP9.68□□□□□ -0.86
SDC1-202ENST00000381150 S100A7L2Q5SY68 101 aa9.68□□□□□ -0.86
SDC1-202ENST00000381150 PKIGQ9Y2B9 76 aa9.68□□□□□ -0.86
SDC1-202ENST00000381150 FAM236DA0A1B0GTK5 79 aa9.68□□□□□ -0.86
SDC1-202ENST00000381150 FAM236CP0DP71 79 aa9.68□□□□□ -0.86
SDC1-202ENST00000381150 C6orf99Q4VX62 202 aa9.67□□□□□ -0.86
SDC1-202ENST00000381150 LINC01006Q8NI28 216 aa9.67□□□□□ -0.86
SDC1-202ENST00000381150 KMT2BQ9UMN6 2715 aaPredicted RBP9.66□□□□□ -0.86
SDC1-202ENST00000381150 IBA57-AS1B1ANH7 110 aa9.66□□□□□ -0.86
SDC1-202ENST00000381150 C16orf95Q9H693 158 aa9.66□□□□□ -0.86
SDC1-202ENST00000381150 TRBV10-1A0A0K0K1A3 114 aa9.65□□□□□ -0.86
SDC1-202ENST00000381150 TRBV6-4A0A1B0GX49 114 aa9.65□□□□□ -0.86
SDC1-202ENST00000381150 IL17DQ8TAD2 202 aa9.65□□□□□ -0.86
SDC1-202ENST00000381150 RBM3P98179 157 aaKnown RBP9.65□□□□□ -0.87
SDC1-202ENST00000381150 RMI2Q96E14 147 aa9.65□□□□□ -0.87
SDC1-202ENST00000381150 JMJD7-PLA2G4BH0Y9G9 81 aa9.64□□□□□ -0.87
SDC1-202ENST00000381150 Q5XG85 94 aa9.64□□□□□ -0.87
SDC1-202ENST00000381150 Q8N814 137 aa9.64□□□□□ -0.87
SDC1-202ENST00000381150 IGHV3OR16-9A0A0B4J2B5 98 aa9.64□□□□□ -0.87
SDC1-202ENST00000381150 TMEM256-PLSCR3K7ERE1 68 aa9.63□□□□□ -0.87
SDC1-202ENST00000381150 SS18Q15532 418 aa9.63□□□□□ -0.87
SDC1-202ENST00000381150 LINC00269Q8N2A0 174 aa9.63□□□□□ -0.87
SDC1-202ENST00000381150 GIG44P09565 113 aaPredicted RBP9.62□□□□□ -0.87
SDC1-202ENST00000381150 A0A0U1RQV1 116 aa9.62□□□□□ -0.87
SDC1-202ENST00000381150 TRBV6-8A0A0A6YYG3 113 aa9.62□□□□□ -0.87
SDC1-202ENST00000381150 M0R2N4 97 aa9.62□□□□□ -0.87
SDC1-202ENST00000381150 HELZ2Q9BYK8 2649 aaKnown RBP9.61□□□□□ -0.87
SDC1-202ENST00000381150 LINC00959A0A1B0GUT2 108 aa9.61□□□□□ -0.87
SDC1-202ENST00000381150 TRAV10A0A0B4J240 114 aa9.6□□□□□ -0.87
SDC1-202ENST00000381150 F8WEM9 126 aa9.6□□□□□ -0.87
SDC1-202ENST00000381150 NDUFC2O95298 119 aa9.6□□□□□ -0.87
SDC1-202ENST00000381150 LINC00336Q6ZUF6 198 aa9.6□□□□□ -0.87
SDC1-202ENST00000381150 C19orf73Q9NVV2 129 aa9.6□□□□□ -0.87
SDC1-202ENST00000381150 UNC79Q9P2D8 2635 aa9.6□□□□□ -0.87
SDC1-202ENST00000381150 A0A087WZ39 114 aa9.59□□□□□ -0.87
SDC1-202ENST00000381150 J3QKU1 62 aa9.59□□□□□ -0.87
SDC1-202ENST00000381150 MPLKIPQ8TAP9 179 aa9.59□□□□□ -0.87
SDC1-202ENST00000381150 IGLV1-51P01701 117 aa9.58□□□□□ -0.88
SDC1-202ENST00000381150 GYPEP15421 78 aa9.58□□□□□ -0.88
SDC1-202ENST00000381150 DAD1P61803 113 aa9.58□□□□□ -0.88
SDC1-202ENST00000381150 BRK1Q8WUW1 75 aa9.58□□□□□ -0.88
SDC1-202ENST00000381150 OBSCN-AS1Q96MR7 158 aa9.58□□□□□ -0.88
SDC1-202ENST00000381150 PLAC8L1A1L4L8 177 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms