RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 XGP55808 180 aa12.55□□□□□ -0.4
GTF3A-201ENST00000381140 HERVK_113P61574 105 aa12.55□□□□□ -0.4
GTF3A-201ENST00000381140 CNBPP62633 177 aaKnown RBP12.55□□□□□ -0.4
GTF3A-201ENST00000381140 C9orf163Q8N9P6 203 aa12.55□□□□□ -0.4
GTF3A-201ENST00000381140 TMEM223A0PJW6 202 aa12.54□□□□□ -0.4
GTF3A-201ENST00000381140 COX6A2Q02221 97 aa12.54□□□□□ -0.4
GTF3A-201ENST00000381140 LINC00469Q8N7U9 141 aa12.54□□□□□ -0.4
GTF3A-201ENST00000381140 E9PLD3 99 aa12.53□□□□□ -0.4
GTF3A-201ENST00000381140 ZNF561-AS1K7EIQ3 104 aa12.53□□□□□ -0.4
GTF3A-201ENST00000381140 CDKN2A-AS1Q9UH64 79 aa12.53□□□□□ -0.4
GTF3A-201ENST00000381140 H3BRM9 83 aa12.52□□□□□ -0.41
GTF3A-201ENST00000381140 APOMO95445 188 aa12.52□□□□□ -0.41
GTF3A-201ENST00000381140 IGHV3OR16-9A0A0B4J2B5 98 aa12.51□□□□□ -0.41
GTF3A-201ENST00000381140 HSPG2P98160 4391 aa12.51□□□□□ -0.41
GTF3A-201ENST00000381140 IGHV3-64A0A075B6Q5 118 aa12.5□□□□□ -0.41
GTF3A-201ENST00000381140 ORAOV1Q8WV07 137 aa12.5□□□□□ -0.41
GTF3A-201ENST00000381140 IGKV2D-26A0A0A0MRZ7 120 aa12.49□□□□□ -0.41
GTF3A-201ENST00000381140 Q6ZSA8 131 aa12.49□□□□□ -0.41
GTF3A-201ENST00000381140 TSTD3H0UI37 97 aa12.48□□□□□ -0.41
GTF3A-201ENST00000381140 SPAG11BQ08648 103 aa12.48□□□□□ -0.41
GTF3A-201ENST00000381140 LINC01561Q8N1V8 128 aa12.48□□□□□ -0.41
GTF3A-201ENST00000381140 A0A087WZ39 114 aa12.47□□□□□ -0.41
GTF3A-201ENST00000381140 SMR3BP02814 79 aaPredicted RBP12.47□□□□□ -0.41
GTF3A-201ENST00000381140 COX8AP10176 69 aa12.47□□□□□ -0.41
GTF3A-201ENST00000381140 NMUP48645 174 aa12.47□□□□□ -0.41
GTF3A-201ENST00000381140 SDIM1Q6ZPB5 146 aa12.47□□□□□ -0.41
GTF3A-201ENST00000381140 CARD19Q96LW7 228 aa12.47□□□□□ -0.41
GTF3A-201ENST00000381140 KRTAP17-1Q9BYP8 105 aa12.47□□□□□ -0.41
GTF3A-201ENST00000381140 PRO1933Q9H354 126 aa12.47□□□□□ -0.41
GTF3A-201ENST00000381140 IGLV5-39A0A0G2JS06 123 aa12.46□□□□□ -0.41
GTF3A-201ENST00000381140 SMIM1B2RUZ4 78 aa12.46□□□□□ -0.41
GTF3A-201ENST00000381140 LEPROTO15243 131 aa12.46□□□□□ -0.41
GTF3A-201ENST00000381140 SPINK8P0C7L1 97 aa12.46□□□□□ -0.41
GTF3A-201ENST00000381140 SYCNQ0VAF6 134 aa12.46□□□□□ -0.41
GTF3A-201ENST00000381140 PLEKHB2Q96CS7 222 aa12.46□□□□□ -0.41
GTF3A-201ENST00000381140 CAMK2N2Q96S95 79 aa12.46□□□□□ -0.41
GTF3A-201ENST00000381140 SCXQ7RTU7 201 aa12.45□□□□□ -0.42
GTF3A-201ENST00000381140 C14orf144Q96I85 54 aa12.45□□□□□ -0.42
GTF3A-201ENST00000381140 UQCR10Q9UDW1 63 aa12.44□□□□□ -0.42
GTF3A-201ENST00000381140 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.44□□□□□ -0.42
GTF3A-201ENST00000381140 DLEU1O43261 78 aa12.43□□□□□ -0.42
GTF3A-201ENST00000381140 CHTF8P0CG12 524 aa12.43□□□□□ -0.42
GTF3A-201ENST00000381140 SLC25A34Q6PIV7 304 aa12.43□□□□□ -0.42
GTF3A-201ENST00000381140 Q6ZRU5 148 aa12.43□□□□□ -0.42
GTF3A-201ENST00000381140 BOD1L2Q8IYS8 172 aa12.43□□□□□ -0.42
GTF3A-201ENST00000381140 Q8N1X5 172 aa12.43□□□□□ -0.42
GTF3A-201ENST00000381140 DPH3Q96FX2 82 aa12.43□□□□□ -0.42
GTF3A-201ENST00000381140 PANO1I0J062 215 aa12.43□□□□□ -0.42
GTF3A-201ENST00000381140 J3QQQ9 107 aa12.43□□□□□ -0.42
GTF3A-201ENST00000381140 TSPEAR-AS2P59090 65 aa12.43□□□□□ -0.42
GTF3A-201ENST00000381140 PCP2Q8IVA1 136 aa12.43□□□□□ -0.42
GTF3A-201ENST00000381140 MIEN1Q9BRT3 115 aa12.43□□□□□ -0.42
GTF3A-201ENST00000381140 DNAH8Q96JB1 4490 aa12.43□□□□□ -0.42
GTF3A-201ENST00000381140 CIRBP-AS1Q8TBR5 109 aa12.42□□□□□ -0.42
GTF3A-201ENST00000381140 C2orf48Q96LS8 159 aa12.42□□□□□ -0.42
GTF3A-201ENST00000381140 IGKV2-24A0A0C4DH68 120 aa12.41□□□□□ -0.42
GTF3A-201ENST00000381140 LGALS3P17931 250 aaKnown RBP12.41□□□□□ -0.42
GTF3A-201ENST00000381140 KRTAP4-5Q9BYR2 181 aa12.41□□□□□ -0.42
GTF3A-201ENST00000381140 TTTY13Q9BZ97 58 aa12.4□□□□□ -0.42
GTF3A-201ENST00000381140 TOMM7Q9P0U1 55 aa12.4□□□□□ -0.42
GTF3A-201ENST00000381140 MYMXA0A1B0GTQ4 84 aa12.39□□□□□ -0.43
GTF3A-201ENST00000381140 EPM2AB3EWF7 344 aa12.38□□□□□ -0.43
GTF3A-201ENST00000381140 NDUFA1O15239 70 aa12.38□□□□□ -0.43
GTF3A-201ENST00000381140 A0A096LNI7 61 aa12.37□□□□□ -0.43
GTF3A-201ENST00000381140 ZNF815PA8K554 130 aa12.37□□□□□ -0.43
GTF3A-201ENST00000381140 PRSS2P07478 247 aa12.37□□□□□ -0.43
GTF3A-201ENST00000381140 Q5VSD8 79 aa12.37□□□□□ -0.43
GTF3A-201ENST00000381140 TP73-AS1Q9UF72 201 aa12.37□□□□□ -0.43
GTF3A-201ENST00000381140 DDTP30046 118 aa12.36□□□□□ -0.43
GTF3A-201ENST00000381140 KIAA0087Q14695 138 aa12.36□□□□□ -0.43
GTF3A-201ENST00000381140 C10orf25Q5T742 122 aa12.36□□□□□ -0.43
GTF3A-201ENST00000381140 UNQ6190/PRO20217Q6UXQ8 127 aa12.36□□□□□ -0.43
GTF3A-201ENST00000381140 COX7B2Q8TF08 81 aa12.36□□□□□ -0.43
GTF3A-201ENST00000381140 PKIGQ9Y2B9 76 aa12.36□□□□□ -0.43
GTF3A-201ENST00000381140 LOC107984640A0A0U1RRK4 108 aa12.35□□□□□ -0.43
GTF3A-201ENST00000381140 FAM229AH3BQW9 127 aa12.35□□□□□ -0.43
GTF3A-201ENST00000381140 C2orf82Q6UX34 121 aa12.35□□□□□ -0.43
GTF3A-201ENST00000381140 LINC00528Q8N1L1 170 aa12.35□□□□□ -0.43
GTF3A-201ENST00000381140 SPACA4Q8TDM5 124 aa12.35□□□□□ -0.43
GTF3A-201ENST00000381140 NDUFA12Q9UI09 145 aa12.35□□□□□ -0.43
GTF3A-201ENST00000381140 F8WDY8 70 aa12.34□□□□□ -0.43
GTF3A-201ENST00000381140 GAGE2BQ13066 116 aa12.34□□□□□ -0.43
GTF3A-201ENST00000381140 Q8IZM0 81 aa12.34□□□□□ -0.43
GTF3A-201ENST00000381140 A0A087WYN8 130 aa12.33□□□□□ -0.44
GTF3A-201ENST00000381140 HNRNPA3P51991 378 aaKnown RBP12.33□□□□□ -0.44
GTF3A-201ENST00000381140 RPL18AQ02543 176 aaKnown RBP12.33□□□□□ -0.44
GTF3A-201ENST00000381140 CIRBPQ14011 172 aaKnown RBP12.33□□□□□ -0.44
GTF3A-201ENST00000381140 C6orf226Q5I0X4 101 aa12.33□□□□□ -0.44
GTF3A-201ENST00000381140 C2orf91Q6ZV80 131 aa12.33□□□□□ -0.44
GTF3A-201ENST00000381140 PCP4L1A6NKN8 68 aa12.32□□□□□ -0.44
GTF3A-201ENST00000381140 CKS1BP61024 79 aa12.32□□□□□ -0.44
GTF3A-201ENST00000381140 ZNF625Q96I27 306 aaPredicted RBP12.32□□□□□ -0.44
GTF3A-201ENST00000381140 HIGD1BQ9P298 99 aa12.32□□□□□ -0.44
GTF3A-201ENST00000381140 C6orf48Q9UBA6 75 aa12.32□□□□□ -0.44
GTF3A-201ENST00000381140 SFTA2Q6UW10 78 aa12.31□□□□□ -0.44
GTF3A-201ENST00000381140 RNF151Q2KHN1 245 aa12.3□□□□□ -0.44
GTF3A-201ENST00000381140 CXCL5P42830 114 aa12.3□□□□□ -0.44
GTF3A-201ENST00000381140 PTTG1IPP53801 180 aa12.3□□□□□ -0.44
GTF3A-201ENST00000381140 HERV-K104P63124 156 aa12.3□□□□□ -0.44
GTF3A-201ENST00000381140 LINC00474Q9P2X8 69 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 184.4 ms