RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 HSPB8Q9UJY1 196 aa7.55□□□□□ -1.2
DEPDC4-202ENST00000378244 IGLC3P0DOY3 106 aa7.55□□□□□ -1.2
DEPDC4-202ENST00000378244 C10orf25Q5T742 122 aa7.55□□□□□ -1.2
DEPDC4-202ENST00000378244 UNQ6190/PRO20217Q6UXQ8 127 aa7.55□□□□□ -1.2
DEPDC4-202ENST00000378244 SDIM1Q6ZPB5 146 aa7.55□□□□□ -1.2
DEPDC4-202ENST00000378244 SMIM1B2RUZ4 78 aa7.54□□□□□ -1.2
DEPDC4-202ENST00000378244 PRSS2P07478 247 aa7.54□□□□□ -1.2
DEPDC4-202ENST00000378244 CHTF8P0CG12 524 aa7.54□□□□□ -1.2
DEPDC4-202ENST00000378244 KIAA0087Q14695 138 aa7.54□□□□□ -1.2
DEPDC4-202ENST00000378244 C6orf226Q5I0X4 101 aa7.54□□□□□ -1.2
DEPDC4-202ENST00000378244 DPH3Q96FX2 82 aa7.54□□□□□ -1.2
DEPDC4-202ENST00000378244 IGKV2-24A0A0C4DH68 120 aa7.53□□□□□ -1.2
DEPDC4-202ENST00000378244 PANO1I0J062 215 aa7.53□□□□□ -1.2
DEPDC4-202ENST00000378244 ZNF22P17026 224 aaPredicted RBP7.53□□□□□ -1.2
DEPDC4-202ENST00000378244 BOD1L2Q8IYS8 172 aa7.53□□□□□ -1.2
DEPDC4-202ENST00000378244 IGLV5-45A0A087WSX0 123 aa7.53□□□□□ -1.2
DEPDC4-202ENST00000378244 XGP55808 180 aa7.53□□□□□ -1.2
DEPDC4-202ENST00000378244 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.53□□□□□ -1.2
DEPDC4-202ENST00000378244 TRAV12-1A0A0B4J245 112 aa7.52□□□□□ -1.2
DEPDC4-202ENST00000378244 F8VRH5 84 aa7.52□□□□□ -1.2
DEPDC4-202ENST00000378244 H3BRM9 83 aa7.52□□□□□ -1.2
DEPDC4-202ENST00000378244 CKS1BP61024 79 aa7.52□□□□□ -1.2
DEPDC4-202ENST00000378244 COA6Q5JTJ3 125 aaKnown RBP7.52□□□□□ -1.2
DEPDC4-202ENST00000378244 C2orf48Q96LS8 159 aa7.52□□□□□ -1.2
DEPDC4-202ENST00000378244 MAP1LC3CQ9BXW4 147 aa7.52□□□□□ -1.2
DEPDC4-202ENST00000378244 NDUFA1O15239 70 aa7.52□□□□□ -1.21
DEPDC4-202ENST00000378244 SMR3BP02814 79 aaPredicted RBP7.52□□□□□ -1.21
DEPDC4-202ENST00000378244 CDK2AP2O75956 126 aa7.51□□□□□ -1.21
DEPDC4-202ENST00000378244 C9orf116Q5BN46 136 aaPredicted RBP7.51□□□□□ -1.21
DEPDC4-202ENST00000378244 LINC01561Q8N1V8 128 aa7.51□□□□□ -1.21
DEPDC4-202ENST00000378244 GAGE2BQ13066 116 aa7.5□□□□□ -1.21
DEPDC4-202ENST00000378244 Q6ZSA8 131 aa7.5□□□□□ -1.21
DEPDC4-202ENST00000378244 SCXQ7RTU7 201 aa7.5□□□□□ -1.21
DEPDC4-202ENST00000378244 Q8IZM0 81 aa7.5□□□□□ -1.21
DEPDC4-202ENST00000378244 C6orf48Q9UBA6 75 aa7.5□□□□□ -1.21
DEPDC4-202ENST00000378244 APOBP04114 4563 aaKnown RBP7.5□□□□□ -1.21
DEPDC4-202ENST00000378244 A0A096LNI7 61 aa7.5□□□□□ -1.21
DEPDC4-202ENST00000378244 LINC00587B1AMM8 73 aa7.5□□□□□ -1.21
DEPDC4-202ENST00000378244 RPL18AQ02543 176 aaKnown RBP7.5□□□□□ -1.21
DEPDC4-202ENST00000378244 COX7B2Q8TF08 81 aa7.5□□□□□ -1.21
DEPDC4-202ENST00000378244 GHRHP01286 108 aa7.49□□□□□ -1.21
DEPDC4-202ENST00000378244 CIRBP-AS1Q8TBR5 109 aa7.49□□□□□ -1.21
DEPDC4-202ENST00000378244 SYS1-DBNDD2H3BUS1 97 aa7.49□□□□□ -1.21
DEPDC4-202ENST00000378244 KRTDAPP60985 99 aa7.49□□□□□ -1.21
DEPDC4-202ENST00000378244 RYR1P21817 5038 aa7.48□□□□□ -1.21
DEPDC4-202ENST00000378244 C3orf79P0CE67 100 aa7.47□□□□□ -1.21
DEPDC4-202ENST00000378244 KRTAP17-1Q9BYP8 105 aa7.47□□□□□ -1.21
DEPDC4-202ENST00000378244 IGLV5-39A0A0G2JS06 123 aa7.47□□□□□ -1.21
DEPDC4-202ENST00000378244 DPM2O94777 84 aa7.47□□□□□ -1.21
DEPDC4-202ENST00000378244 S100A2P29034 98 aa7.47□□□□□ -1.21
DEPDC4-202ENST00000378244 SNRPEP62304 92 aaKnown RBP7.47□□□□□ -1.21
DEPDC4-202ENST00000378244 HERV-K104P63124 156 aa7.47□□□□□ -1.21
DEPDC4-202ENST00000378244 GAGE2EQ4V326 116 aa7.47□□□□□ -1.21
DEPDC4-202ENST00000378244 ZNF625Q96I27 306 aaPredicted RBP7.47□□□□□ -1.21
DEPDC4-202ENST00000378244 GAGE2DQ9UEU5 116 aa7.47□□□□□ -1.21
DEPDC4-202ENST00000378244 HSPG2P98160 4391 aa7.46□□□□□ -1.21
DEPDC4-202ENST00000378244 LOC107984640A0A0U1RRK4 108 aa7.46□□□□□ -1.21
DEPDC4-202ENST00000378244 TMEM223A0PJW6 202 aa7.46□□□□□ -1.21
DEPDC4-202ENST00000378244 A0A087WYN8 130 aa7.46□□□□□ -1.22
DEPDC4-202ENST00000378244 IGKCP01834 107 aa7.46□□□□□ -1.22
DEPDC4-202ENST00000378244 PLNP26678 52 aa7.46□□□□□ -1.22
DEPDC4-202ENST00000378244 C5orf47Q569G3 176 aa7.46□□□□□ -1.22
DEPDC4-202ENST00000378244 Q6ZRP5 223 aa7.46□□□□□ -1.22
DEPDC4-202ENST00000378244 HIST3H2BBQ8N257 126 aa7.46□□□□□ -1.22
DEPDC4-202ENST00000378244 STPG4Q8N801 248 aa7.45□□□□□ -1.22
DEPDC4-202ENST00000378244 SPACA4Q8TDM5 124 aa7.45□□□□□ -1.22
DEPDC4-202ENST00000378244 TRBV30A0A0K0K1B3 111 aa7.45□□□□□ -1.22
DEPDC4-202ENST00000378244 PTTG1IPP53801 180 aa7.45□□□□□ -1.22
DEPDC4-202ENST00000378244 HIST1H2BLQ99880 126 aa7.44□□□□□ -1.22
DEPDC4-202ENST00000378244 FAT1Q14517 4588 aa7.44□□□□□ -1.22
DEPDC4-202ENST00000378244 M0QXV9 152 aa7.44□□□□□ -1.22
DEPDC4-202ENST00000378244 CXCL5P42830 114 aa7.44□□□□□ -1.22
DEPDC4-202ENST00000378244 RNF151Q2KHN1 245 aa7.44□□□□□ -1.22
DEPDC4-202ENST00000378244 SRRM2Q9UQ35 2752 aaKnown RBP7.44□□□□□ -1.22
DEPDC4-202ENST00000378244 NDUFC2-KCTD14E9PQ53 114 aa7.43□□□□□ -1.22
DEPDC4-202ENST00000378244 PFN2P35080 140 aa7.43□□□□□ -1.22
DEPDC4-202ENST00000378244 CIRBPQ14011 172 aaKnown RBP7.43□□□□□ -1.22
DEPDC4-202ENST00000378244 XAGE1AQ9HD64 81 aa7.43□□□□□ -1.22
DEPDC4-202ENST00000378244 LINC01545Q5VT33 79 aa7.43□□□□□ -1.22
DEPDC4-202ENST00000378244 LINC00474Q9P2X8 69 aa7.43□□□□□ -1.22
DEPDC4-202ENST00000378244 HERC2O95714 4834 aa7.42□□□□□ -1.22
DEPDC4-202ENST00000378244 ATOH7Q8N100 152 aa7.42□□□□□ -1.22
DEPDC4-202ENST00000378244 FAM168BA1KXE4 195 aa7.41□□□□□ -1.22
DEPDC4-202ENST00000378244 KRTAP4-5Q9BYR2 181 aa7.41□□□□□ -1.22
DEPDC4-202ENST00000378244 PKIGQ9Y2B9 76 aa7.41□□□□□ -1.22
DEPDC4-202ENST00000378244 A0A1W2PNN7 141 aa7.41□□□□□ -1.22
DEPDC4-202ENST00000378244 TLX1NBP0CAT3 122 aa7.4□□□□□ -1.22
DEPDC4-202ENST00000378244 TSPEAR-AS2P59090 65 aa7.4□□□□□ -1.22
DEPDC4-202ENST00000378244 LINC00528Q8N1L1 170 aa7.4□□□□□ -1.22
DEPDC4-202ENST00000378244 Q8N1X5 172 aa7.4□□□□□ -1.22
DEPDC4-202ENST00000378244 HERVK_113P61574 105 aa7.4□□□□□ -1.23
DEPDC4-202ENST00000378244 DNAH8Q96JB1 4490 aa7.4□□□□□ -1.23
DEPDC4-202ENST00000378244 Q5VSD8 79 aa7.39□□□□□ -1.23
DEPDC4-202ENST00000378244 FAM19A5Q7Z5A7 132 aaPredicted RBP7.39□□□□□ -1.23
DEPDC4-202ENST00000378244 PLAC8Q9NZF1 115 aa7.39□□□□□ -1.23
DEPDC4-202ENST00000378244 NDUFA12Q9UI09 145 aa7.39□□□□□ -1.23
DEPDC4-202ENST00000378244 C20orf202A1L168 122 aa7.39□□□□□ -1.23
DEPDC4-202ENST00000378244 J3QQQ9 107 aa7.39□□□□□ -1.23
DEPDC4-202ENST00000378244 C9orf129Q5T035 196 aaKnown RBP7.39□□□□□ -1.23
DEPDC4-202ENST00000378244 ERG28Q9UKR5 140 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms