RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 PRSS2P07478 247 aa10.47□□□□□ -0.73
CLIC1-208ENST00000375784 UNQ6190/PRO20217Q6UXQ8 127 aa10.47□□□□□ -0.73
CLIC1-208ENST00000375784 PACRGQ96M98 296 aaPredicted RBP10.47□□□□□ -0.73
CLIC1-208ENST00000375784 A0A0J9YXV3 536 aa10.46□□□□□ -0.73
CLIC1-208ENST00000375784 RPL18AQ02543 176 aaKnown RBP10.46□□□□□ -0.73
CLIC1-208ENST00000375784 KIAA0087Q14695 138 aa10.46□□□□□ -0.73
CLIC1-208ENST00000375784 PMVKQ15126 192 aa10.46□□□□□ -0.73
CLIC1-208ENST00000375784 CST9LQ9H4G1 147 aa10.46□□□□□ -0.73
CLIC1-208ENST00000375784 C6orf226Q5I0X4 101 aa10.45□□□□□ -0.74
CLIC1-208ENST00000375784 CBLN2Q8IUK8 224 aa10.45□□□□□ -0.74
CLIC1-208ENST00000375784 CDKN2A-AS1Q9UH64 79 aa10.45□□□□□ -0.74
CLIC1-208ENST00000375784 TRBV30A0A0K0K1B3 111 aa10.44□□□□□ -0.74
CLIC1-208ENST00000375784 TINCRA0A1B0GVN0 87 aa10.44□□□□□ -0.74
CLIC1-208ENST00000375784 HBDP02042 147 aa10.44□□□□□ -0.74
CLIC1-208ENST00000375784 CKS1BP61024 79 aa10.44□□□□□ -0.74
CLIC1-208ENST00000375784 C10orf25Q5T742 122 aa10.44□□□□□ -0.74
CLIC1-208ENST00000375784 LINC00469Q8N7U9 141 aa10.44□□□□□ -0.74
CLIC1-208ENST00000375784 URB1-AS1Q96HZ7 61 aa10.44□□□□□ -0.74
CLIC1-208ENST00000375784 TOMM7Q9P0U1 55 aa10.44□□□□□ -0.74
CLIC1-208ENST00000375784 C2orf82Q6UX34 121 aa10.43□□□□□ -0.74
CLIC1-208ENST00000375784 Q8IZM0 81 aa10.43□□□□□ -0.74
CLIC1-208ENST00000375784 C6orf48Q9UBA6 75 aa10.43□□□□□ -0.74
CLIC1-208ENST00000375784 A0A096LNJ9 63 aa10.42□□□□□ -0.74
CLIC1-208ENST00000375784 TLX1NBP0CAT3 122 aa10.42□□□□□ -0.74
CLIC1-208ENST00000375784 ATP5LO75964 103 aa10.41□□□□□ -0.74
CLIC1-208ENST00000375784 NDUFA6P56556 154 aa10.41□□□□□ -0.74
CLIC1-208ENST00000375784 PMCHL1Q16048 86 aa10.41□□□□□ -0.74
CLIC1-208ENST00000375784 RNF213Q63HN8 5207 aa10.4□□□□□ -0.74
CLIC1-208ENST00000375784 C9orf116Q5BN46 136 aaPredicted RBP10.4□□□□□ -0.74
CLIC1-208ENST00000375784 CHCHD1Q96BP2 118 aaKnown RBP10.4□□□□□ -0.74
CLIC1-208ENST00000375784 IGLV5-45A0A087WSX0 123 aa10.39□□□□□ -0.75
CLIC1-208ENST00000375784 A0A1W2PNN7 141 aa10.39□□□□□ -0.75
CLIC1-208ENST00000375784 GAGE2EQ4V326 116 aa10.39□□□□□ -0.75
CLIC1-208ENST00000375784 PDZD11Q5EBL8 140 aa10.39□□□□□ -0.75
CLIC1-208ENST00000375784 Q6ZRP5 223 aa10.39□□□□□ -0.75
CLIC1-208ENST00000375784 GAGE2DQ9UEU5 116 aa10.39□□□□□ -0.75
CLIC1-208ENST00000375784 NDUFC2-KCTD14E9PQ53 114 aa10.38□□□□□ -0.75
CLIC1-208ENST00000375784 H3BRM9 83 aa10.38□□□□□ -0.75
CLIC1-208ENST00000375784 CXCL5P42830 114 aa10.38□□□□□ -0.75
CLIC1-208ENST00000375784 HNRNPA3P51991 378 aaKnown RBP10.38□□□□□ -0.75
CLIC1-208ENST00000375784 COLCA2A8K830 154 aa10.37□□□□□ -0.75
CLIC1-208ENST00000375784 SMIM1B2RUZ4 78 aa10.37□□□□□ -0.75
CLIC1-208ENST00000375784 TRGC2P03986 189 aa10.37□□□□□ -0.75
CLIC1-208ENST00000375784 MT1HL1P0DM35 61 aa10.37□□□□□ -0.75
CLIC1-208ENST00000375784 BAGE3Q86Y29 109 aa10.37□□□□□ -0.75
CLIC1-208ENST00000375784 F8VRH5 84 aa10.36□□□□□ -0.75
CLIC1-208ENST00000375784 COX7B2Q8TF08 81 aa10.36□□□□□ -0.75
CLIC1-208ENST00000375784 SPINK8P0C7L1 97 aa10.35□□□□□ -0.75
CLIC1-208ENST00000375784 IGLC3P0DOY3 106 aa10.35□□□□□ -0.75
CLIC1-208ENST00000375784 PRR3P79522 188 aaKnown RBP10.35□□□□□ -0.75
CLIC1-208ENST00000375784 HSBP1O75506 76 aa10.34□□□□□ -0.75
CLIC1-208ENST00000375784 PKHD1L1Q86WI1 4243 aa10.32□□□□□ -0.76
CLIC1-208ENST00000375784 IFI27L1Q96BM0 104 aa10.32□□□□□ -0.76
CLIC1-208ENST00000375784 CHTOPQ9Y3Y2 248 aaKnown RBP10.31□□□□□ -0.76
CLIC1-208ENST00000375784 FAM168BA1KXE4 195 aa10.3□□□□□ -0.76
CLIC1-208ENST00000375784 ZNF22P17026 224 aaPredicted RBP10.3□□□□□ -0.76
CLIC1-208ENST00000375784 PHF5AQ7RTV0 110 aaKnown RBP10.3□□□□□ -0.76
CLIC1-208ENST00000375784 FAM19A5Q7Z5A7 132 aaPredicted RBP10.3□□□□□ -0.76
CLIC1-208ENST00000375784 LRP2P98164 4655 aa10.29□□□□□ -0.76
CLIC1-208ENST00000375784 TRAV12-1A0A0B4J245 112 aa10.29□□□□□ -0.76
CLIC1-208ENST00000375784 C9orf129Q5T035 196 aaKnown RBP10.29□□□□□ -0.76
CLIC1-208ENST00000375784 TMEM170BQ5T4T1 132 aa10.29□□□□□ -0.76
CLIC1-208ENST00000375784 FAM19A2Q8N3H0 131 aa10.29□□□□□ -0.76
CLIC1-208ENST00000375784 TMA7Q9Y2S6 64 aaKnown RBP10.29□□□□□ -0.76
CLIC1-208ENST00000375784 IGLV5-39A0A0G2JS06 123 aa10.28□□□□□ -0.76
CLIC1-208ENST00000375784 C11orf86A6NJI1 115 aa10.28□□□□□ -0.76
CLIC1-208ENST00000375784 SERF1AO75920 110 aa10.27□□□□□ -0.77
CLIC1-208ENST00000375784 M0QXV9 152 aa10.26□□□□□ -0.77
CLIC1-208ENST00000375784 SPINK6Q6UWN8 80 aa10.26□□□□□ -0.77
CLIC1-208ENST00000375784 XAGE1AQ9HD64 81 aa10.26□□□□□ -0.77
CLIC1-208ENST00000375784 PSORS1C2Q9UIG4 136 aa10.26□□□□□ -0.77
CLIC1-208ENST00000375784 LEPROTL1O95214 131 aa10.25□□□□□ -0.77
CLIC1-208ENST00000375784 UBE2BP63146 152 aa10.24□□□□□ -0.77
CLIC1-208ENST00000375784 C1orf137Q5JT78 98 aa10.24□□□□□ -0.77
CLIC1-208ENST00000375784 SFTA2Q6UW10 78 aa10.24□□□□□ -0.77
CLIC1-208ENST00000375784 KRTAP7-1Q8IUC3 87 aa10.24□□□□□ -0.77
CLIC1-208ENST00000375784 SRSF9Q13242 221 aaKnown RBP eCLIP10.23□□□□□ -0.77
CLIC1-208ENST00000375784 HSPB8Q9UJY1 196 aa10.23□□□□□ -0.77
CLIC1-208ENST00000375784 LINC00310P59036 64 aa10.22□□□□□ -0.77
CLIC1-208ENST00000375784 LBHQ53QV2 105 aaPredicted RBP10.22□□□□□ -0.77
CLIC1-208ENST00000375784 H0Y8G0 127 aa10.21□□□□□ -0.77
CLIC1-208ENST00000375784 REG3GQ6UW15 175 aa10.21□□□□□ -0.77
CLIC1-208ENST00000375784 C22orf24Q9Y442 160 aa10.21□□□□□ -0.77
CLIC1-208ENST00000375784 LOC105371267A0A1B0GV96 52 aa10.2□□□□□ -0.78
CLIC1-208ENST00000375784 TMEM223A0PJW6 202 aa10.2□□□□□ -0.78
CLIC1-208ENST00000375784 NUPR1O60356 82 aa10.2□□□□□ -0.78
CLIC1-208ENST00000375784 PFN2P35080 140 aa10.2□□□□□ -0.78
CLIC1-208ENST00000375784 COX17Q14061 63 aa10.2□□□□□ -0.78
CLIC1-208ENST00000375784 ODF1Q14990 250 aa10.2□□□□□ -0.78
CLIC1-208ENST00000375784 TNXBP22105 4242 aa10.2□□□□□ -0.78
CLIC1-208ENST00000375784 FABP4P15090 132 aa10.19□□□□□ -0.78
CLIC1-208ENST00000375784 TP73-AS1Q9UF72 201 aa10.19□□□□□ -0.78
CLIC1-208ENST00000375784 ERG28Q9UKR5 140 aa10.19□□□□□ -0.78
CLIC1-208ENST00000375784 IGLV7-43P04211 117 aa10.18□□□□□ -0.78
CLIC1-208ENST00000375784 KRTAP11-1Q8IUC1 163 aa10.18□□□□□ -0.78
CLIC1-208ENST00000375784 ZNF625Q96I27 306 aaPredicted RBP10.18□□□□□ -0.78
CLIC1-208ENST00000375784 MRPL55Q7Z7F7 128 aaKnown RBP10.17□□□□□ -0.78
CLIC1-208ENST00000375784 HIST1H2BKO60814 126 aa10.16□□□□□ -0.78
CLIC1-208ENST00000375784 HIST1H2BJP06899 126 aa10.16□□□□□ -0.78
CLIC1-208ENST00000375784 HIST1H2BOP23527 126 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms