RNA–Protein interactions for RNA: ENST00000375635.6

C6orf48-202, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-202ENST00000375635 BAGE3Q86Y29 109 aa8.39□□□□□ -1.07
C6orf48-202ENST00000375635 FAM19A2Q8N3H0 131 aa8.39□□□□□ -1.07
C6orf48-202ENST00000375635 LINC00469Q8N7U9 141 aa8.39□□□□□ -1.07
C6orf48-202ENST00000375635 MYCBP2O75592 4640 aa8.38□□□□□ -1.07
C6orf48-202ENST00000375635 LCE2AQ5TA79 106 aaPredicted RBP8.38□□□□□ -1.07
C6orf48-202ENST00000375635 Q8IZM0 81 aa8.38□□□□□ -1.07
C6orf48-202ENST00000375635 LINC00518Q8N0U6 118 aa8.38□□□□□ -1.07
C6orf48-202ENST00000375635 HSBP1O75506 76 aa8.37□□□□□ -1.07
C6orf48-202ENST00000375635 CTAG1AP78358 180 aa8.37□□□□□ -1.07
C6orf48-202ENST00000375635 GAGE2BQ13066 116 aa8.37□□□□□ -1.07
C6orf48-202ENST00000375635 STPG4Q8N801 248 aa8.37□□□□□ -1.07
C6orf48-202ENST00000375635 DPH3Q96FX2 82 aa8.37□□□□□ -1.07
C6orf48-202ENST00000375635 LINC00474Q9P2X8 69 aa8.37□□□□□ -1.07
C6orf48-202ENST00000375635 PKIGQ9Y2B9 76 aa8.37□□□□□ -1.07
C6orf48-202ENST00000375635 TRBV30A0A0K0K1B3 111 aa8.36□□□□□ -1.07
C6orf48-202ENST00000375635 A0A1W2PNN7 141 aa8.36□□□□□ -1.07
C6orf48-202ENST00000375635 C11orf86A6NJI1 115 aa8.36□□□□□ -1.07
C6orf48-202ENST00000375635 PLA2G1BP04054 148 aaKnown RBP8.36□□□□□ -1.07
C6orf48-202ENST00000375635 SPINK8P0C7L1 97 aa8.36□□□□□ -1.07
C6orf48-202ENST00000375635 INAFM2P0DMQ5 153 aa8.36□□□□□ -1.07
C6orf48-202ENST00000375635 ZNF22P17026 224 aaPredicted RBP8.36□□□□□ -1.07
C6orf48-202ENST00000375635 NDUFA6P56556 154 aa8.36□□□□□ -1.07
C6orf48-202ENST00000375635 C9orf116Q5BN46 136 aaPredicted RBP8.36□□□□□ -1.07
C6orf48-202ENST00000375635 Q6ZRP5 223 aa8.36□□□□□ -1.07
C6orf48-202ENST00000375635 IFI27L1Q96BM0 104 aa8.36□□□□□ -1.07
C6orf48-202ENST00000375635 TOMM7Q9P0U1 55 aa8.36□□□□□ -1.07
C6orf48-202ENST00000375635 TRAV12-1A0A0B4J245 112 aa8.35□□□□□ -1.07
C6orf48-202ENST00000375635 IGLV5-39A0A0G2JS06 123 aa8.35□□□□□ -1.07
C6orf48-202ENST00000375635 PCP4L1A6NKN8 68 aa8.35□□□□□ -1.07
C6orf48-202ENST00000375635 HIST1H2BKO60814 126 aa8.35□□□□□ -1.07
C6orf48-202ENST00000375635 HIST1H2BJP06899 126 aa8.35□□□□□ -1.07
C6orf48-202ENST00000375635 HIST1H2BOP23527 126 aa8.35□□□□□ -1.07
C6orf48-202ENST00000375635 HIST1H2BBP33778 126 aa8.35□□□□□ -1.07
C6orf48-202ENST00000375635 HIST1H2BDP58876 126 aa8.35□□□□□ -1.07
C6orf48-202ENST00000375635 HIST1H2BCP62807 126 aa8.35□□□□□ -1.07
C6orf48-202ENST00000375635 S100A12P80511 92 aa8.35□□□□□ -1.07
C6orf48-202ENST00000375635 HIST2H2BEQ16778 126 aa8.35□□□□□ -1.07
C6orf48-202ENST00000375635 C6orf226Q5I0X4 101 aa8.35□□□□□ -1.07
C6orf48-202ENST00000375635 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.35□□□□□ -1.07
C6orf48-202ENST00000375635 HIST1H2BHQ93079 126 aa8.35□□□□□ -1.07
C6orf48-202ENST00000375635 PACRGQ96M98 296 aaPredicted RBP8.35□□□□□ -1.07
C6orf48-202ENST00000375635 HIST1H2BNQ99877 126 aa8.35□□□□□ -1.07
C6orf48-202ENST00000375635 HIST1H2BMQ99879 126 aa8.35□□□□□ -1.07
C6orf48-202ENST00000375635 PRSS2P07478 247 aa8.34□□□□□ -1.07
C6orf48-202ENST00000375635 AKR1D1P51857 326 aa8.34□□□□□ -1.07
C6orf48-202ENST00000375635 RPL18AQ02543 176 aaKnown RBP8.34□□□□□ -1.07
C6orf48-202ENST00000375635 RPL37AP61513 92 aaKnown RBP8.33□□□□□ -1.08
C6orf48-202ENST00000375635 KRTAP7-1Q8IUC3 87 aa8.33□□□□□ -1.08
C6orf48-202ENST00000375635 COX7B2Q8TF08 81 aa8.33□□□□□ -1.08
C6orf48-202ENST00000375635 CHTOPQ9Y3Y2 248 aaKnown RBP8.33□□□□□ -1.08
C6orf48-202ENST00000375635 HNRNPA3P51991 378 aaKnown RBP8.32□□□□□ -1.08
C6orf48-202ENST00000375635 CKS1BP61024 79 aa8.32□□□□□ -1.08
C6orf48-202ENST00000375635 NDUFC2-KCTD14E9PQ53 114 aa8.31□□□□□ -1.08
C6orf48-202ENST00000375635 F8VRH5 84 aa8.31□□□□□ -1.08
C6orf48-202ENST00000375635 H3BRM9 83 aa8.31□□□□□ -1.08
C6orf48-202ENST00000375635 LEPROTL1O95214 131 aa8.31□□□□□ -1.08
C6orf48-202ENST00000375635 CXCL5P42830 114 aa8.31□□□□□ -1.08
C6orf48-202ENST00000375635 LOC100996750A0A140TA64 210 aa8.3□□□□□ -1.08
C6orf48-202ENST00000375635 FAM168BA1KXE4 195 aa8.3□□□□□ -1.08
C6orf48-202ENST00000375635 ODF1Q14990 250 aa8.3□□□□□ -1.08
C6orf48-202ENST00000375635 GAGE2EQ4V326 116 aa8.3□□□□□ -1.08
C6orf48-202ENST00000375635 C9orf129Q5T035 196 aaKnown RBP8.3□□□□□ -1.08
C6orf48-202ENST00000375635 C12orf57Q99622 126 aa8.3□□□□□ -1.08
C6orf48-202ENST00000375635 KRTAP4-6Q9BYQ5 205 aa8.3□□□□□ -1.08
C6orf48-202ENST00000375635 GAGE2DQ9UEU5 116 aa8.3□□□□□ -1.08
C6orf48-202ENST00000375635 LRP1Q07954 4544 aaKnown RBP8.3□□□□□ -1.08
C6orf48-202ENST00000375635 TMEM223A0PJW6 202 aa8.28□□□□□ -1.08
C6orf48-202ENST00000375635 TMEM170BQ5T4T1 132 aa8.28□□□□□ -1.08
C6orf48-202ENST00000375635 DMBT1Q9UGM3 2413 aaPredicted RBP8.28□□□□□ -1.08
C6orf48-202ENST00000375635 PKHD1L1Q86WI1 4243 aa8.27□□□□□ -1.09
C6orf48-202ENST00000375635 FABP4P15090 132 aa8.27□□□□□ -1.09
C6orf48-202ENST00000375635 COA6Q5JTJ3 125 aaKnown RBP8.27□□□□□ -1.09
C6orf48-202ENST00000375635 C7orf33Q8WU49 177 aa8.27□□□□□ -1.09
C6orf48-202ENST00000375635 SMIM6P0DI80 62 aa8.26□□□□□ -1.09
C6orf48-202ENST00000375635 PRR3P79522 188 aaKnown RBP8.26□□□□□ -1.09
C6orf48-202ENST00000375635 PHF5AQ7RTV0 110 aaKnown RBP8.26□□□□□ -1.09
C6orf48-202ENST00000375635 KRTAP11-1Q8IUC1 163 aa8.26□□□□□ -1.09
C6orf48-202ENST00000375635 ZNF625Q96I27 306 aaPredicted RBP8.26□□□□□ -1.09
C6orf48-202ENST00000375635 HSPB8Q9UJY1 196 aa8.26□□□□□ -1.09
C6orf48-202ENST00000375635 XAGE1AQ9HD64 81 aa8.25□□□□□ -1.09
C6orf48-202ENST00000375635 H0Y8G0 127 aa8.24□□□□□ -1.09
C6orf48-202ENST00000375635 SERTAD4-AS1Q5TG53 156 aa8.24□□□□□ -1.09
C6orf48-202ENST00000375635 FAT3Q8TDW7 4589 aa8.24□□□□□ -1.09
C6orf48-202ENST00000375635 S100A6P06703 90 aa8.23□□□□□ -1.09
C6orf48-202ENST00000375635 FAM19A5Q7Z5A7 132 aaPredicted RBP8.23□□□□□ -1.09
C6orf48-202ENST00000375635 PMCHL2Q9BQD1 86 aa8.22□□□□□ -1.09
C6orf48-202ENST00000375635 PSORS1C2Q9UIG4 136 aa8.22□□□□□ -1.09
C6orf48-202ENST00000375635 SYS1-DBNDD2H3BUS1 97 aa8.21□□□□□ -1.1
C6orf48-202ENST00000375635 MAP1LC3CQ9BXW4 147 aa8.21□□□□□ -1.1
C6orf48-202ENST00000375635 KRTAP29-1A8MX34 341 aaPredicted RBP8.2□□□□□ -1.1
C6orf48-202ENST00000375635 M0QXV9 152 aa8.2□□□□□ -1.1
C6orf48-202ENST00000375635 DPM2O94777 84 aa8.2□□□□□ -1.1
C6orf48-202ENST00000375635 PLNP26678 52 aa8.2□□□□□ -1.1
C6orf48-202ENST00000375635 TSPEAR-AS2P59090 65 aa8.2□□□□□ -1.1
C6orf48-202ENST00000375635 SRSF9Q13242 221 aaKnown RBP eCLIP8.2□□□□□ -1.1
C6orf48-202ENST00000375635 ERG28Q9UKR5 140 aa8.2□□□□□ -1.1
C6orf48-202ENST00000375635 HERC1Q15751 4861 aa8.19□□□□□ -1.1
C6orf48-202ENST00000375635 PFN2P35080 140 aa8.19□□□□□ -1.1
C6orf48-202ENST00000375635 PLA2G2DQ9UNK4 145 aa8.19□□□□□ -1.1
C6orf48-202ENST00000375635 C22orf24Q9Y442 160 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms