RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 Q6ZRU5 148 aa13.4□□□□□ -0.26
NELFE-202ENST00000375429 IGKV2D-26A0A0A0MRZ7 120 aa13.39□□□□□ -0.27
NELFE-202ENST00000375429 CKS1BP61024 79 aa13.39□□□□□ -0.27
NELFE-202ENST00000375429 PLEKHB2Q96CS7 222 aa13.39□□□□□ -0.27
NELFE-202ENST00000375429 F8WDY8 70 aa13.38□□□□□ -0.27
NELFE-202ENST00000375429 NDUFA1O15239 70 aa13.38□□□□□ -0.27
NELFE-202ENST00000375429 J3QQQ9 107 aa13.37□□□□□ -0.27
NELFE-202ENST00000375429 PGPEP1Q9NXJ5 209 aa13.37□□□□□ -0.27
NELFE-202ENST00000375429 IGLV5-52A0A0A0MRZ9 124 aa13.37□□□□□ -0.27
NELFE-202ENST00000375429 CXCL5P42830 114 aa13.37□□□□□ -0.27
NELFE-202ENST00000375429 CARD19Q96LW7 228 aa13.37□□□□□ -0.27
NELFE-202ENST00000375429 HECTD4Q9Y4D8 3996 aa13.36□□□□□ -0.27
NELFE-202ENST00000375429 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.36□□□□□ -0.27
NELFE-202ENST00000375429 CDPF1Q6NVV7 123 aa13.36□□□□□ -0.27
NELFE-202ENST00000375429 C9orf163Q8N9P6 203 aa13.35□□□□□ -0.27
NELFE-202ENST00000375429 ZNF625Q96I27 306 aaPredicted RBP13.35□□□□□ -0.27
NELFE-202ENST00000375429 C6orf48Q9UBA6 75 aa13.35□□□□□ -0.27
NELFE-202ENST00000375429 HSBP1L1C9JCN9 74 aa13.34□□□□□ -0.27
NELFE-202ENST00000375429 LGALS3P17931 250 aaKnown RBP13.34□□□□□ -0.27
NELFE-202ENST00000375429 LINC01620Q4KN68 170 aa13.34□□□□□ -0.27
NELFE-202ENST00000375429 NDUFA12Q9UI09 145 aa13.33□□□□□ -0.28
NELFE-202ENST00000375429 DNAH5Q8TE73 4624 aa13.33□□□□□ -0.28
NELFE-202ENST00000375429 TTTY13Q9BZ97 58 aa13.32□□□□□ -0.28
NELFE-202ENST00000375429 TRBV30A0A0K0K1B3 111 aa13.32□□□□□ -0.28
NELFE-202ENST00000375429 NMUP48645 174 aa13.32□□□□□ -0.28
NELFE-202ENST00000375429 RNF151Q2KHN1 245 aa13.32□□□□□ -0.28
NELFE-202ENST00000375429 C9orf116Q5BN46 136 aaPredicted RBP13.32□□□□□ -0.28
NELFE-202ENST00000375429 MYMXA0A1B0GTQ4 84 aa13.29□□□□□ -0.28
NELFE-202ENST00000375429 SFTA2Q6UW10 78 aa13.29□□□□□ -0.28
NELFE-202ENST00000375429 VAMP8Q9BV40 100 aa13.29□□□□□ -0.28
NELFE-202ENST00000375429 PAM16Q9Y3D7 125 aa13.29□□□□□ -0.28
NELFE-202ENST00000375429 PCP2Q8IVA1 136 aa13.28□□□□□ -0.28
NELFE-202ENST00000375429 SDIM1Q6ZPB5 146 aa13.28□□□□□ -0.28
NELFE-202ENST00000375429 GCSHP23434 173 aa13.27□□□□□ -0.29
NELFE-202ENST00000375429 HERV-K104P63124 156 aa13.27□□□□□ -0.29
NELFE-202ENST00000375429 ZNF815PA8K554 130 aa13.26□□□□□ -0.29
NELFE-202ENST00000375429 SPATA45Q537H7 98 aa13.26□□□□□ -0.29
NELFE-202ENST00000375429 PKHD1P08F94 4074 aa13.25□□□□□ -0.29
NELFE-202ENST00000375429 ERG28Q9UKR5 140 aa13.25□□□□□ -0.29
NELFE-202ENST00000375429 LOC107984640A0A0U1RRK4 108 aa13.24□□□□□ -0.29
NELFE-202ENST00000375429 C16orf90A8MZG2 172 aa13.24□□□□□ -0.29
NELFE-202ENST00000375429 TLX1NBP0CAT3 122 aa13.24□□□□□ -0.29
NELFE-202ENST00000375429 PFN2P35080 140 aa13.24□□□□□ -0.29
NELFE-202ENST00000375429 KRTAP10-1P60331 282 aa13.24□□□□□ -0.29
NELFE-202ENST00000375429 A0A0J9YXY3 114 aa13.23□□□□□ -0.29
NELFE-202ENST00000375429 SMIM6P0DI80 62 aa13.23□□□□□ -0.29
NELFE-202ENST00000375429 Q6ZRP5 223 aa13.23□□□□□ -0.29
NELFE-202ENST00000375429 NDUFC2-KCTD14E9PQ53 114 aa13.22□□□□□ -0.29
NELFE-202ENST00000375429 MEIG1Q5JSS6 88 aa13.22□□□□□ -0.29
NELFE-202ENST00000375429 A0A0U1RRA0 63 aa13.21□□□□□ -0.29
NELFE-202ENST00000375429 SMIM13P0DJ93 91 aa13.21□□□□□ -0.29
NELFE-202ENST00000375429 RPL18AQ02543 176 aaKnown RBP13.21□□□□□ -0.29
NELFE-202ENST00000375429 COX8AP10176 69 aa13.2□□□□□ -0.3
NELFE-202ENST00000375429 S100A12P80511 92 aa13.2□□□□□ -0.3
NELFE-202ENST00000375429 GAGE2BQ13066 116 aa13.2□□□□□ -0.3
NELFE-202ENST00000375429 COX17Q14061 63 aa13.2□□□□□ -0.3
NELFE-202ENST00000375429 C14orf144Q96I85 54 aa13.2□□□□□ -0.3
NELFE-202ENST00000375429 DYNC1H1Q14204 4646 aaKnown RBP13.2□□□□□ -0.3
NELFE-202ENST00000375429 A0A096LNI7 61 aa13.2□□□□□ -0.3
NELFE-202ENST00000375429 LINC00158P58513 81 aa13.2□□□□□ -0.3
NELFE-202ENST00000375429 GAGE2EQ4V326 116 aa13.19□□□□□ -0.3
NELFE-202ENST00000375429 GAGE2DQ9UEU5 116 aa13.19□□□□□ -0.3
NELFE-202ENST00000375429 TP73-AS1Q9UF72 201 aa13.19□□□□□ -0.3
NELFE-202ENST00000375429 LINC00587B1AMM8 73 aa13.18□□□□□ -0.3
NELFE-202ENST00000375429 CHTF8P0CG12 524 aa13.18□□□□□ -0.3
NELFE-202ENST00000375429 PTTG1IPP53801 180 aa13.18□□□□□ -0.3
NELFE-202ENST00000375429 BOD1L2Q8IYS8 172 aa13.18□□□□□ -0.3
NELFE-202ENST00000375429 PKIGQ9Y2B9 76 aa13.18□□□□□ -0.3
NELFE-202ENST00000375429 IGKV2-24A0A0C4DH68 120 aa13.17□□□□□ -0.3
NELFE-202ENST00000375429 PANO1I0J062 215 aa13.17□□□□□ -0.3
NELFE-202ENST00000375429 DNAH8Q96JB1 4490 aa13.17□□□□□ -0.3
NELFE-202ENST00000375429 FAM30AQ9NZY2 134 aa13.16□□□□□ -0.3
NELFE-202ENST00000375429 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.16□□□□□ -0.3
NELFE-202ENST00000375429 LRP1BQ9NZR2 4599 aa13.16□□□□□ -0.3
NELFE-202ENST00000375429 SCGB1D4Q6XE38 83 aa13.15□□□□□ -0.3
NELFE-202ENST00000375429 LITAFQ99732 161 aa13.15□□□□□ -0.3
NELFE-202ENST00000375429 CIRBPQ14011 172 aaKnown RBP13.15□□□□□ -0.3
NELFE-202ENST00000375429 ADAMTSL4-AS1Q5T5F5 129 aa13.15□□□□□ -0.3
NELFE-202ENST00000375429 MIR7-3HGQ8N6C7 128 aa13.15□□□□□ -0.3
NELFE-202ENST00000375429 XAGE1AQ9HD64 81 aa13.15□□□□□ -0.3
NELFE-202ENST00000375429 EPPK1P58107 5090 aaKnown RBP13.15□□□□□ -0.3
NELFE-202ENST00000375429 DLEU1O43261 78 aa13.14□□□□□ -0.31
NELFE-202ENST00000375429 DAND5Q8N907 189 aa13.14□□□□□ -0.31
NELFE-202ENST00000375429 SND1-IT1Q9HBX3 110 aa13.14□□□□□ -0.31
NELFE-202ENST00000375429 TIMM17BO60830 172 aa13.13□□□□□ -0.31
NELFE-202ENST00000375429 C9orf129Q5T035 196 aaKnown RBP13.13□□□□□ -0.31
NELFE-202ENST00000375429 Q6ZSA8 131 aa13.13□□□□□ -0.31
NELFE-202ENST00000375429 SLC25A34Q6PIV7 304 aa13.12□□□□□ -0.31
NELFE-202ENST00000375429 SPACA4Q8TDM5 124 aa13.12□□□□□ -0.31
NELFE-202ENST00000375429 C12orf57Q99622 126 aa13.11□□□□□ -0.31
NELFE-202ENST00000375429 LINC00474Q9P2X8 69 aa13.11□□□□□ -0.31
NELFE-202ENST00000375429 DPH3Q96FX2 82 aa13.1□□□□□ -0.31
NELFE-202ENST00000375429 LINC00518Q8N0U6 118 aa13.08□□□□□ -0.32
NELFE-202ENST00000375429 FAM168BA1KXE4 195 aa13.07□□□□□ -0.32
NELFE-202ENST00000375429 TMEM238C9JI98 176 aa13.07□□□□□ -0.32
NELFE-202ENST00000375429 A0A087WYN8 130 aa13.07□□□□□ -0.32
NELFE-202ENST00000375429 A0A1W2PNN7 141 aa13.07□□□□□ -0.32
NELFE-202ENST00000375429 EIF4EBP3O60516 100 aaPredicted RBP13.07□□□□□ -0.32
NELFE-202ENST00000375429 NPC2P61916 151 aa13.07□□□□□ -0.32
NELFE-202ENST00000375429 PRO1933Q9H354 126 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 1351.8 ms