RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 Q8IZM0 81 aa4.64□□□□□ -1.67
SMC1A-202ENST00000375340 Q8N2B8 174 aa4.64□□□□□ -1.67
SMC1A-202ENST00000375340 C11orf45Q8TAV5 145 aa4.64□□□□□ -1.67
SMC1A-202ENST00000375340 IMUPQ9GZP8 106 aa4.64□□□□□ -1.67
SMC1A-202ENST00000375340 LOC107984640A0A0U1RRK4 108 aa4.64□□□□□ -1.67
SMC1A-202ENST00000375340 M0QXV9 152 aa4.64□□□□□ -1.67
SMC1A-202ENST00000375340 UNQ6190/PRO20217Q6UXQ8 127 aa4.64□□□□□ -1.67
SMC1A-202ENST00000375340 SMIM9A6NGZ8 99 aa4.64□□□□□ -1.67
SMC1A-202ENST00000375340 RPL28P46779 137 aaKnown RBP4.63□□□□□ -1.67
SMC1A-202ENST00000375340 WFDC10BQ8IUB3 73 aa4.63□□□□□ -1.67
SMC1A-202ENST00000375340 CYSRT1A8MQ03 144 aa4.63□□□□□ -1.67
SMC1A-202ENST00000375340 A0A0U1RQV1 116 aa4.63□□□□□ -1.67
SMC1A-202ENST00000375340 A0A087WZ39 114 aa4.63□□□□□ -1.67
SMC1A-202ENST00000375340 COX17Q14061 63 aa4.63□□□□□ -1.67
SMC1A-202ENST00000375340 BRI3O95415 125 aa4.62□□□□□ -1.67
SMC1A-202ENST00000375340 ZNF462Q96JM2 2506 aa4.62□□□□□ -1.67
SMC1A-202ENST00000375340 ZNF73O43830 326 aaPredicted RBP4.62□□□□□ -1.67
SMC1A-202ENST00000375340 ZNF292O60281 2723 aa4.62□□□□□ -1.67
SMC1A-202ENST00000375340 H0Y9J4 135 aa4.62□□□□□ -1.67
SMC1A-202ENST00000375340 NTM-AS1Q6ZSK4 140 aa4.62□□□□□ -1.67
SMC1A-202ENST00000375340 DEFB131BA0A096LNP1 70 aa4.62□□□□□ -1.67
SMC1A-202ENST00000375340 NANOS2P60321 138 aaKnown RBP4.62□□□□□ -1.67
SMC1A-202ENST00000375340 TRBV10-3A0A0K0K1G6 114 aa4.62□□□□□ -1.67
SMC1A-202ENST00000375340 PDE6GP18545 87 aa4.62□□□□□ -1.67
SMC1A-202ENST00000375340 SOSTDC1Q6X4U4 206 aa4.62□□□□□ -1.67
SMC1A-202ENST00000375340 FAM19A1Q7Z5A9 133 aa4.62□□□□□ -1.67
SMC1A-202ENST00000375340 Q8N3U1 123 aa4.62□□□□□ -1.67
SMC1A-202ENST00000375340 A0A096LNI7 61 aa4.61□□□□□ -1.67
SMC1A-202ENST00000375340 A0A0J9YWU9 116 aa4.61□□□□□ -1.67
SMC1A-202ENST00000375340 KPRPQ5T749 579 aaPredicted RBP4.61□□□□□ -1.67
SMC1A-202ENST00000375340 FASNP49327 2511 aaKnown RBP4.61□□□□□ -1.67
SMC1A-202ENST00000375340 LINC00846Q9NV44 126 aa4.61□□□□□ -1.67
SMC1A-202ENST00000375340 MIFP14174 115 aa4.61□□□□□ -1.67
SMC1A-202ENST00000375340 MP68P56378 58 aa4.61□□□□□ -1.67
SMC1A-202ENST00000375340 LELP1Q5T871 98 aa4.61□□□□□ -1.67
SMC1A-202ENST00000375340 SMCR5Q8TEV8 140 aa4.61□□□□□ -1.67
SMC1A-202ENST00000375340 IGLV5-39A0A0G2JS06 123 aa4.6□□□□□ -1.67
SMC1A-202ENST00000375340 HIGD2AQ9BW72 106 aa4.6□□□□□ -1.67
SMC1A-202ENST00000375340 PRR4Q16378 134 aa4.6□□□□□ -1.67
SMC1A-202ENST00000375340 LITAFQ99732 161 aa4.6□□□□□ -1.67
SMC1A-202ENST00000375340 FLG2Q5D862 2391 aaPredicted RBP4.6□□□□□ -1.67
SMC1A-202ENST00000375340 HRCT1Q6UXD1 115 aa4.6□□□□□ -1.67
SMC1A-202ENST00000375340 M0R378 163 aa4.6□□□□□ -1.67
SMC1A-202ENST00000375340 MAP1AP78559 2803 aaPredicted RBP4.6□□□□□ -1.67
SMC1A-202ENST00000375340 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.6□□□□□ -1.67
SMC1A-202ENST00000375340 MYO15AQ9UKN7 3530 aa4.6□□□□□ -1.67
SMC1A-202ENST00000375340 NDUFC2O95298 119 aa4.59□□□□□ -1.67
SMC1A-202ENST00000375340 CSDC2Q9Y534 153 aaKnown RBP4.59□□□□□ -1.67
SMC1A-202ENST00000375340 IGLV1-51P01701 117 aa4.59□□□□□ -1.67
SMC1A-202ENST00000375340 PPDPFQ9H3Y8 114 aa4.59□□□□□ -1.67
SMC1A-202ENST00000375340 CELA1Q9UNI1 258 aa4.59□□□□□ -1.67
SMC1A-202ENST00000375340 NDUFC2-KCTD14E9PQ53 114 aa4.59□□□□□ -1.67
SMC1A-202ENST00000375340 TRBV7-7A0A0K0K1E9 115 aa4.59□□□□□ -1.68
SMC1A-202ENST00000375340 SYCNQ0VAF6 134 aa4.59□□□□□ -1.68
SMC1A-202ENST00000375340 LRCOL1A6NCL2 159 aa4.58□□□□□ -1.68
SMC1A-202ENST00000375340 VPREB1P12018 145 aa4.58□□□□□ -1.68
SMC1A-202ENST00000375340 RANBP2P49792 3224 aaKnown RBP4.58□□□□□ -1.68
SMC1A-202ENST00000375340 SBSPONQ8IVN8 264 aa4.58□□□□□ -1.68
SMC1A-202ENST00000375340 WFDC13Q8IUB5 93 aa4.58□□□□□ -1.68
SMC1A-202ENST00000375340 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.58□□□□□ -1.68
SMC1A-202ENST00000375340 IGHV4-30-4P0DP06 118 aa4.57□□□□□ -1.68
SMC1A-202ENST00000375340 FLNAP21333 2647 aaKnown RBP4.57□□□□□ -1.68
SMC1A-202ENST00000375340 PKIGQ9Y2B9 76 aa4.57□□□□□ -1.68
SMC1A-202ENST00000375340 B9D2Q9BPU9 175 aa4.57□□□□□ -1.68
SMC1A-202ENST00000375340 KIR2DL5BQ8NHK3 375 aa4.57□□□□□ -1.68
SMC1A-202ENST00000375340 EIF4EBP3O60516 100 aaPredicted RBP4.56□□□□□ -1.68
SMC1A-202ENST00000375340 OXLD1Q5BKU9 147 aa4.56□□□□□ -1.68
SMC1A-202ENST00000375340 USP24Q9UPU5 2620 aa4.56□□□□□ -1.68
SMC1A-202ENST00000375340 IGLV5-45A0A087WSX0 123 aa4.56□□□□□ -1.68
SMC1A-202ENST00000375340 Q8N9L7 120 aa4.56□□□□□ -1.68
SMC1A-202ENST00000375340 LINC00575Q6W349 94 aa4.56□□□□□ -1.68
SMC1A-202ENST00000375340 ZNF575Q86XF7 245 aa4.55□□□□□ -1.68
SMC1A-202ENST00000375340 NDUFB1O75438 58 aa4.55□□□□□ -1.68
SMC1A-202ENST00000375340 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.55□□□□□ -1.68
SMC1A-202ENST00000375340 C16orf95Q9H693 158 aa4.55□□□□□ -1.68
SMC1A-202ENST00000375340 LAMA1P25391 3075 aa4.55□□□□□ -1.68
SMC1A-202ENST00000375340 CHKB-CPT1BH3BT56 60 aa4.55□□□□□ -1.68
SMC1A-202ENST00000375340 LINC01547P58512 204 aaPredicted RBP4.55□□□□□ -1.68
SMC1A-202ENST00000375340 DHRS4-AS1Q9P1J3 65 aa4.55□□□□□ -1.68
SMC1A-202ENST00000375340 IGKV4-1P06312 121 aa4.55□□□□□ -1.68
SMC1A-202ENST00000375340 DEFB116Q30KQ4 102 aa4.54□□□□□ -1.68
SMC1A-202ENST00000375340 TRAV7A0A075B6U4 112 aa4.54□□□□□ -1.68
SMC1A-202ENST00000375340 REV3LO60673 3130 aa4.54□□□□□ -1.68
SMC1A-202ENST00000375340 SPTSSBQ8NFR3 76 aa4.54□□□□□ -1.68
SMC1A-202ENST00000375340 PRUNE2Q8WUY3 3088 aa4.54□□□□□ -1.68
SMC1A-202ENST00000375340 SHISA2Q6UWI4 295 aa4.54□□□□□ -1.68
SMC1A-202ENST00000375340 Q6ZTC4 211 aa4.54□□□□□ -1.68
SMC1A-202ENST00000375340 FAM19A3Q7Z5A8 133 aa4.53□□□□□ -1.68
SMC1A-202ENST00000375340 VCANP13611 3396 aa4.53□□□□□ -1.68
SMC1A-202ENST00000375340 Q6ZVQ6 151 aa4.53□□□□□ -1.68
SMC1A-202ENST00000375340 M0R2N4 97 aa4.53□□□□□ -1.68
SMC1A-202ENST00000375340 F8P00451 2351 aa4.53□□□□□ -1.68
SMC1A-202ENST00000375340 C10orf25Q5T742 122 aa4.53□□□□□ -1.68
SMC1A-202ENST00000375340 LYPD5Q6UWN5 251 aa4.53□□□□□ -1.68
SMC1A-202ENST00000375340 IGLV9-49A0A0B4J1Y8 123 aa4.53□□□□□ -1.68
SMC1A-202ENST00000375340 A0A1B0GUV1 79 aa4.53□□□□□ -1.68
SMC1A-202ENST00000375340 KLK9Q2XQG4 91 aa4.53□□□□□ -1.68
SMC1A-202ENST00000375340 SERP1Q9Y6X1 66 aa4.53□□□□□ -1.68
SMC1A-202ENST00000375340 IGHV3OR16-9A0A0B4J2B5 98 aa4.52□□□□□ -1.69
SMC1A-202ENST00000375340 Q6ZRU5 148 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms