RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 HIVEP1P15822 2718 aa7.81□□□□□ -1.16
CCDC40-203ENST00000374877 LECT2O14960 151 aa7.81□□□□□ -1.16
CCDC40-203ENST00000374877 COX7CP15954 63 aa7.81□□□□□ -1.16
CCDC40-203ENST00000374877 CCL18P55774 89 aa7.81□□□□□ -1.16
CCDC40-203ENST00000374877 C11orf68Q9H3H3 251 aaKnown RBP7.81□□□□□ -1.16
CCDC40-203ENST00000374877 PAX4O43316 350 aa7.81□□□□□ -1.16
CCDC40-203ENST00000374877 BAHCC1Q9P281 2608 aa7.8□□□□□ -1.16
CCDC40-203ENST00000374877 CCL24O00175 119 aa7.8□□□□□ -1.16
CCDC40-203ENST00000374877 SLPIP03973 132 aa7.79□□□□□ -1.16
CCDC40-203ENST00000374877 FN1P02751 2386 aaKnown RBP7.79□□□□□ -1.16
CCDC40-203ENST00000374877 IGLV4-60A0A075B6I1 120 aa7.79□□□□□ -1.16
CCDC40-203ENST00000374877 ATOX1O00244 68 aa7.79□□□□□ -1.16
CCDC40-203ENST00000374877 NCR3O14931 201 aa7.79□□□□□ -1.16
CCDC40-203ENST00000374877 FLNBO75369 2602 aaKnown RBP7.79□□□□□ -1.16
CCDC40-203ENST00000374877 LOC107984640A0A0U1RRK4 108 aa7.79□□□□□ -1.16
CCDC40-203ENST00000374877 H0YGX0 51 aa7.79□□□□□ -1.16
CCDC40-203ENST00000374877 MTORP42345 2549 aa7.79□□□□□ -1.16
CCDC40-203ENST00000374877 TRGV4A0A0C4DH28 118 aa7.78□□□□□ -1.16
CCDC40-203ENST00000374877 LINC00846Q9NV44 126 aa7.78□□□□□ -1.16
CCDC40-203ENST00000374877 NSD1Q96L73 2696 aaPredicted RBP7.78□□□□□ -1.16
CCDC40-203ENST00000374877 hADV29S1A0JD25 119 aa7.78□□□□□ -1.16
CCDC40-203ENST00000374877 CFAP161Q6P656 301 aa7.78□□□□□ -1.16
CCDC40-203ENST00000374877 KRTAP10-3P60369 221 aa7.78□□□□□ -1.16
CCDC40-203ENST00000374877 A0A087WVE0 104 aa7.77□□□□□ -1.17
CCDC40-203ENST00000374877 C2orf48Q96LS8 159 aa7.77□□□□□ -1.17
CCDC40-203ENST00000374877 A0A1B0GX51 115 aa7.77□□□□□ -1.17
CCDC40-203ENST00000374877 RPL35AP18077 110 aaKnown RBP7.77□□□□□ -1.17
CCDC40-203ENST00000374877 TRAV25A0A0B4J276 109 aa7.76□□□□□ -1.17
CCDC40-203ENST00000374877 IGHV3OR16-9A0A0B4J2B5 98 aa7.76□□□□□ -1.17
CCDC40-203ENST00000374877 RPL18AQ02543 176 aaKnown RBP7.76□□□□□ -1.17
CCDC40-203ENST00000374877 IBA57-AS1B1ANH7 110 aa7.76□□□□□ -1.17
CCDC40-203ENST00000374877 HIST1H4AP62805 103 aaKnown RBP7.76□□□□□ -1.17
CCDC40-203ENST00000374877 WFDC10AQ9H1F0 79 aa7.76□□□□□ -1.17
CCDC40-203ENST00000374877 C6orf226Q5I0X4 101 aa7.75□□□□□ -1.17
CCDC40-203ENST00000374877 TRBV6-8A0A0A6YYG3 113 aa7.74□□□□□ -1.17
CCDC40-203ENST00000374877 CRYGAP11844 174 aa7.74□□□□□ -1.17
CCDC40-203ENST00000374877 Q6JHZ5 121 aa7.74□□□□□ -1.17
CCDC40-203ENST00000374877 F8P00451 2351 aa7.74□□□□□ -1.17
CCDC40-203ENST00000374877 TRBV6-4A0A1B0GX49 114 aa7.74□□□□□ -1.17
CCDC40-203ENST00000374877 C16orf74Q96GX8 76 aa7.74□□□□□ -1.17
CCDC40-203ENST00000374877 A0A087WZ39 114 aa7.74□□□□□ -1.17
CCDC40-203ENST00000374877 CYSTM1Q9H1C7 97 aa7.74□□□□□ -1.17
CCDC40-203ENST00000374877 ORMDL1Q9P0S3 153 aa7.74□□□□□ -1.17
CCDC40-203ENST00000374877 J3KT08 172 aa7.73□□□□□ -1.17
CCDC40-203ENST00000374877 NIPBLQ6KC79 2804 aaeCLIP7.73□□□□□ -1.17
CCDC40-203ENST00000374877 NF1P21359 2839 aa7.73□□□□□ -1.17
CCDC40-203ENST00000374877 PLAC8L1A1L4L8 177 aa7.73□□□□□ -1.17
CCDC40-203ENST00000374877 XCL1P47992 114 aa7.73□□□□□ -1.17
CCDC40-203ENST00000374877 OBSCN-AS1Q96MR7 158 aa7.73□□□□□ -1.17
CCDC40-203ENST00000374877 GIG44P09565 113 aaPredicted RBP7.73□□□□□ -1.17
CCDC40-203ENST00000374877 CLPSL2Q6UWE3 100 aa7.72□□□□□ -1.17
CCDC40-203ENST00000374877 SETXQ7Z333 2677 aaKnown RBP7.72□□□□□ -1.17
CCDC40-203ENST00000374877 USP17L23D6RBM5 183 aa7.72□□□□□ -1.17
CCDC40-203ENST00000374877 LINC00482Q8N8I6 264 aa7.72□□□□□ -1.17
CCDC40-203ENST00000374877 LINC00959A0A1B0GUT2 108 aa7.71□□□□□ -1.17
CCDC40-203ENST00000374877 LINC01561Q8N1V8 128 aa7.71□□□□□ -1.17
CCDC40-203ENST00000374877 SERP2Q8N6R1 65 aa7.71□□□□□ -1.17
CCDC40-203ENST00000374877 PRR3P79522 188 aaKnown RBP7.71□□□□□ -1.18
CCDC40-203ENST00000374877 KRTAP24-1Q3LI83 254 aa7.7□□□□□ -1.18
CCDC40-203ENST00000374877 DEFB130BP0DP73 79 aa7.7□□□□□ -1.18
CCDC40-203ENST00000374877 DEFB130AP0DP74 79 aa7.7□□□□□ -1.18
CCDC40-203ENST00000374877 CMC4P56277 68 aaPredicted RBP7.7□□□□□ -1.18
CCDC40-203ENST00000374877 FHL2Q14192 279 aa7.7□□□□□ -1.18
CCDC40-203ENST00000374877 FAM19A5Q7Z5A7 132 aaPredicted RBP7.7□□□□□ -1.18
CCDC40-203ENST00000374877 IGLV1-51P01701 117 aa7.69□□□□□ -1.18
CCDC40-203ENST00000374877 SS18Q15532 418 aa7.69□□□□□ -1.18
CCDC40-203ENST00000374877 WFDC9Q8NEX5 89 aa7.69□□□□□ -1.18
CCDC40-203ENST00000374877 CCKP06307 115 aa7.69□□□□□ -1.18
CCDC40-203ENST00000374877 KIR2DL5BQ8NHK3 375 aa7.68□□□□□ -1.18
CCDC40-203ENST00000374877 A0A096LPF7 62 aa7.67□□□□□ -1.18
CCDC40-203ENST00000374877 Q8N814 137 aa7.66□□□□□ -1.18
CCDC40-203ENST00000374877 TRAV23DV6A0A075B6W5 121 aa7.66□□□□□ -1.18
CCDC40-203ENST00000374877 JMJD7-PLA2G4BH0Y9G9 81 aa7.66□□□□□ -1.18
CCDC40-203ENST00000374877 GYPEP15421 78 aa7.66□□□□□ -1.18
CCDC40-203ENST00000374877 C9orf66Q5T8R8 295 aa7.66□□□□□ -1.18
CCDC40-203ENST00000374877 DSCR8Q96T75 97 aa7.66□□□□□ -1.18
CCDC40-203ENST00000374877 TMEM258P61165 79 aa7.65□□□□□ -1.18
CCDC40-203ENST00000374877 S100A7L2Q5SY68 101 aa7.65□□□□□ -1.18
CCDC40-203ENST00000374877 UPK3BQ9BT76 320 aa7.65□□□□□ -1.18
CCDC40-203ENST00000374877 Q8IZM0 81 aa7.65□□□□□ -1.18
CCDC40-203ENST00000374877 CSNK1G2-AS1Q8NCQ2 148 aa7.65□□□□□ -1.18
CCDC40-203ENST00000374877 TMEM256-PLSCR3K7ERE1 68 aa7.65□□□□□ -1.19
CCDC40-203ENST00000374877 NANOS2P60321 138 aaKnown RBP7.65□□□□□ -1.19
CCDC40-203ENST00000374877 GHRHP01286 108 aa7.64□□□□□ -1.19
CCDC40-203ENST00000374877 ENHOQ6UWT2 76 aa7.64□□□□□ -1.19
CCDC40-203ENST00000374877 FAM19A1Q7Z5A9 133 aa7.64□□□□□ -1.19
CCDC40-203ENST00000374877 SMIM9A6NGZ8 99 aa7.64□□□□□ -1.19
CCDC40-203ENST00000374877 DPH3Q96FX2 82 aa7.64□□□□□ -1.19
CCDC40-203ENST00000374877 IGLV10-54A0A075B6I4 117 aa7.63□□□□□ -1.19
CCDC40-203ENST00000374877 RPS28P62857 69 aaKnown RBP7.63□□□□□ -1.19
CCDC40-203ENST00000374877 C9orf116Q5BN46 136 aaPredicted RBP7.63□□□□□ -1.19
CCDC40-203ENST00000374877 C6orf99Q4VX62 202 aa7.63□□□□□ -1.19
CCDC40-203ENST00000374877 C19orf73Q9NVV2 129 aa7.63□□□□□ -1.19
CCDC40-203ENST00000374877 NBEAL2Q6ZNJ1 2754 aa7.62□□□□□ -1.19
CCDC40-203ENST00000374877 LINC00167Q96N53 147 aa7.62□□□□□ -1.19
CCDC40-203ENST00000374877 UBL5Q9BZL1 73 aa7.62□□□□□ -1.19
CCDC40-203ENST00000374877 WIPF1O43516 503 aa7.62□□□□□ -1.19
CCDC40-203ENST00000374877 LINC00269Q8N2A0 174 aa7.61□□□□□ -1.19
CCDC40-203ENST00000374877 ATP5EP2Q5VTU8 51 aa7.61□□□□□ -1.19
CCDC40-203ENST00000374877 C5orf47Q569G3 176 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms