RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 NCOR2Q9Y618 2525 aa16.44■□□□□ 0.22
CCND3-202ENST00000372988 NOTCH3Q9UM47 2321 aa16.44■□□□□ 0.22
CCND3-202ENST00000372988 CSNK1G2-AS1Q8NCQ2 148 aa16.44■□□□□ 0.22
CCND3-202ENST00000372988 USP9YO00507 2555 aaPredicted RBP16.43■□□□□ 0.22
CCND3-202ENST00000372988 C20orf197Q8N268 126 aa16.43■□□□□ 0.22
CCND3-202ENST00000372988 CHD6Q8TD26 2715 aa16.42■□□□□ 0.22
CCND3-202ENST00000372988 HRCT1Q6UXD1 115 aa16.42■□□□□ 0.22
CCND3-202ENST00000372988 BCE1O60756 84 aa16.41■□□□□ 0.22
CCND3-202ENST00000372988 Q6ZQT0 140 aa16.41■□□□□ 0.22
CCND3-202ENST00000372988 WFDC10AQ9H1F0 79 aa16.41■□□□□ 0.22
CCND3-202ENST00000372988 A0A1B0GUV1 79 aa16.4■□□□□ 0.22
CCND3-202ENST00000372988 CCL24O00175 119 aa16.4■□□□□ 0.22
CCND3-202ENST00000372988 RPL35AP18077 110 aaKnown RBP16.4■□□□□ 0.22
CCND3-202ENST00000372988 CHD8Q9HCK8 2581 aa16.4■□□□□ 0.22
CCND3-202ENST00000372988 DOPEY1Q5JWR5 2465 aa16.4■□□□□ 0.22
CCND3-202ENST00000372988 CMC4P56277 68 aaPredicted RBP16.4■□□□□ 0.22
CCND3-202ENST00000372988 COX17Q14061 63 aa16.4■□□□□ 0.22
CCND3-202ENST00000372988 KIAA0087Q14695 138 aa16.4■□□□□ 0.22
CCND3-202ENST00000372988 EPM2AB3EWF7 344 aa16.39■□□□□ 0.21
CCND3-202ENST00000372988 FAM236DA0A1B0GTK5 79 aa16.39■□□□□ 0.21
CCND3-202ENST00000372988 FAM236CP0DP71 79 aa16.39■□□□□ 0.21
CCND3-202ENST00000372988 C6orf99Q4VX62 202 aa16.39■□□□□ 0.21
CCND3-202ENST00000372988 LINC00575Q6W349 94 aa16.39■□□□□ 0.21
CCND3-202ENST00000372988 CR1P17927 2039 aa16.38■□□□□ 0.21
CCND3-202ENST00000372988 LOC110117498A0A087WWA1 95 aa16.38■□□□□ 0.21
CCND3-202ENST00000372988 TRAV7A0A075B6U4 112 aa16.37■□□□□ 0.21
CCND3-202ENST00000372988 Q8NDZ9 215 aa16.37■□□□□ 0.21
CCND3-202ENST00000372988 C19orf73Q9NVV2 129 aa16.37■□□□□ 0.21
CCND3-202ENST00000372988 MYO9AB2RTY4 2548 aa16.36■□□□□ 0.21
CCND3-202ENST00000372988 RNASE1P07998 156 aaKnown RBP16.36■□□□□ 0.21
CCND3-202ENST00000372988 RBM3P98179 157 aaKnown RBP16.36■□□□□ 0.21
CCND3-202ENST00000372988 H7BZZ5 65 aa16.35■□□□□ 0.21
CCND3-202ENST00000372988 CLPSL2Q6UWE3 100 aa16.35■□□□□ 0.21
CCND3-202ENST00000372988 FLNCQ14315 2725 aa16.35■□□□□ 0.21
CCND3-202ENST00000372988 ZNF561-AS1K7EIQ3 104 aa16.34■□□□□ 0.21
CCND3-202ENST00000372988 C6orf223Q8N319 242 aa16.34■□□□□ 0.21
CCND3-202ENST00000372988 UTP20O75691 2785 aaKnown RBP16.34■□□□□ 0.21
CCND3-202ENST00000372988 IGHV4-28A0A0C4DH34 117 aa16.34■□□□□ 0.21
CCND3-202ENST00000372988 LINC00482Q8N8I6 264 aa16.34■□□□□ 0.21
CCND3-202ENST00000372988 ANKRD17O75179 2603 aaKnown RBP16.34■□□□□ 0.21
CCND3-202ENST00000372988 LINC01547P58512 204 aaPredicted RBP16.33■□□□□ 0.2
CCND3-202ENST00000372988 CFAP46Q8IYW2 2715 aa16.32■□□□□ 0.2
CCND3-202ENST00000372988 M0R2N4 97 aa16.32■□□□□ 0.2
CCND3-202ENST00000372988 GYPEP15421 78 aa16.32■□□□□ 0.2
CCND3-202ENST00000372988 USP9XQ93008 2570 aaPredicted RBP16.32■□□□□ 0.2
CCND3-202ENST00000372988 SETXQ7Z333 2677 aaKnown RBP16.32■□□□□ 0.2
CCND3-202ENST00000372988 SERP1Q9Y6X1 66 aa16.31■□□□□ 0.2
CCND3-202ENST00000372988 FBN2P35556 2912 aa16.31■□□□□ 0.2
CCND3-202ENST00000372988 C9orf116Q5BN46 136 aaPredicted RBP16.3■□□□□ 0.2
CCND3-202ENST00000372988 KLKP1Q107X0 134 aa16.29■□□□□ 0.2
CCND3-202ENST00000372988 CD164L2Q6UWJ8 174 aa16.29■□□□□ 0.2
CCND3-202ENST00000372988 SPTBN4Q9H254 2564 aa16.29■□□□□ 0.2
CCND3-202ENST00000372988 WNK1Q9H4A3 2382 aa16.29■□□□□ 0.2
CCND3-202ENST00000372988 DEFB130BP0DP73 79 aa16.28■□□□□ 0.2
CCND3-202ENST00000372988 DEFB130AP0DP74 79 aa16.28■□□□□ 0.2
CCND3-202ENST00000372988 Q6ZVQ6 151 aa16.28■□□□□ 0.2
CCND3-202ENST00000372988 CUBNO60494 3623 aa16.28■□□□□ 0.2
CCND3-202ENST00000372988 LINC00612Q8N6U2 182 aa16.28■□□□□ 0.2
CCND3-202ENST00000372988 TRAV10A0A0B4J240 114 aa16.27■□□□□ 0.19
CCND3-202ENST00000372988 LAMTOR3Q9UHA4 124 aa16.27■□□□□ 0.19
CCND3-202ENST00000372988 TEX15Q9BXT5 2789 aa16.25■□□□□ 0.19
CCND3-202ENST00000372988 IGLV1-51P01701 117 aa16.25■□□□□ 0.19
CCND3-202ENST00000372988 POLQO75417 2590 aa16.24■□□□□ 0.19
CCND3-202ENST00000372988 C9orf66Q5T8R8 295 aa16.24■□□□□ 0.19
CCND3-202ENST00000372988 LINC00269Q8N2A0 174 aa16.24■□□□□ 0.19
CCND3-202ENST00000372988 CXCL6P80162 114 aa16.24■□□□□ 0.19
CCND3-202ENST00000372988 HAMPP81172 84 aa16.24■□□□□ 0.19
CCND3-202ENST00000372988 CHCHD10Q8WYQ3 142 aaPredicted RBP16.24■□□□□ 0.19
CCND3-202ENST00000372988 JMJD1CQ15652 2540 aa16.23■□□□□ 0.19
CCND3-202ENST00000372988 TLN2Q9Y4G6 2542 aa16.23■□□□□ 0.19
CCND3-202ENST00000372988 NIPBLQ6KC79 2804 aaeCLIP16.22■□□□□ 0.19
CCND3-202ENST00000372988 DNAJC9-AS1A6NH13 148 aa16.21■□□□□ 0.18
CCND3-202ENST00000372988 IGLV6-57P01721 117 aa16.21■□□□□ 0.18
CCND3-202ENST00000372988 PDE6GP18545 87 aa16.21■□□□□ 0.18
CCND3-202ENST00000372988 ZNF843Q8N446 348 aa16.21■□□□□ 0.18
CCND3-202ENST00000372988 SPATA3Q8NHX4 192 aa16.21■□□□□ 0.18
CCND3-202ENST00000372988 A0A096LPF7 62 aa16.2■□□□□ 0.18
CCND3-202ENST00000372988 RMI2Q96E14 147 aa16.19■□□□□ 0.18
CCND3-202ENST00000372988 IGLV10-54A0A075B6I4 117 aa16.18■□□□□ 0.18
CCND3-202ENST00000372988 PRO0255Q9UI72 69 aa16.18■□□□□ 0.18
CCND3-202ENST00000372988 SNURFQ9Y675 71 aa16.18■□□□□ 0.18
CCND3-202ENST00000372988 H3BQ85 93 aa16.18■□□□□ 0.18
CCND3-202ENST00000372988 Q6ZQY7 126 aa16.18■□□□□ 0.18
CCND3-202ENST00000372988 MRAPQ8TCY5 172 aa16.18■□□□□ 0.18
CCND3-202ENST00000372988 BBC3Q96PG8 261 aaPredicted RBP16.18■□□□□ 0.18
CCND3-202ENST00000372988 EPG5Q9HCE0 2579 aa16.17■□□□□ 0.18
CCND3-202ENST00000372988 MUC7Q8TAX7 377 aa16.17■□□□□ 0.18
CCND3-202ENST00000372988 C10orf25Q5T742 122 aa16.16■□□□□ 0.18
CCND3-202ENST00000372988 LINC01006Q8NI28 216 aa16.16■□□□□ 0.18
CCND3-202ENST00000372988 REG3AQ06141 175 aa16.15■□□□□ 0.18
CCND3-202ENST00000372988 Q8N3U1 123 aa16.15■□□□□ 0.18
CCND3-202ENST00000372988 PKD1L2Q7Z442 2459 aa16.15■□□□□ 0.18
CCND3-202ENST00000372988 UNQ6190/PRO20217Q6UXQ8 127 aa16.14■□□□□ 0.17
CCND3-202ENST00000372988 F8WEM9 126 aa16.13■□□□□ 0.17
CCND3-202ENST00000372988 ESM1Q9NQ30 184 aa16.13■□□□□ 0.17
CCND3-202ENST00000372988 KRTAP10-9P60411 292 aa16.13■□□□□ 0.17
CCND3-202ENST00000372988 ANGP03950 147 aaKnown RBP16.12■□□□□ 0.17
CCND3-202ENST00000372988 A0A0J9YWU9 116 aa16.12■□□□□ 0.17
CCND3-202ENST00000372988 TRBV7-4A0A0J9YYF1 115 aa16.12■□□□□ 0.17
CCND3-202ENST00000372988 IGHV4-30-4P0DP06 118 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms