RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 hDV103S1A0JD37 113 aa8.19□□□□□ -1.1
VCL-202ENST00000372755 KRTAP10-9P60411 292 aa8.18□□□□□ -1.1
VCL-202ENST00000372755 TMEM254Q8TBM7 123 aa8.17□□□□□ -1.1
VCL-202ENST00000372755 KIAA1549Q9HCM3 1950 aa8.16□□□□□ -1.1
VCL-202ENST00000372755 Q6ZSN1 163 aa8.16□□□□□ -1.1
VCL-202ENST00000372755 COL4A4P53420 1690 aaPredicted RBP8.16□□□□□ -1.1
VCL-202ENST00000372755 SBSPONQ8IVN8 264 aa8.16□□□□□ -1.1
VCL-202ENST00000372755 PSPHP1O15172 72 aa8.15□□□□□ -1.1
VCL-202ENST00000372755 Q6ZRU5 148 aa8.15□□□□□ -1.1
VCL-202ENST00000372755 ACACBO00763 2458 aa8.15□□□□□ -1.1
VCL-202ENST00000372755 NHLRC4P0CG21 123 aaPredicted RBP8.15□□□□□ -1.1
VCL-202ENST00000372755 DEFB116Q30KQ4 102 aa8.15□□□□□ -1.11
VCL-202ENST00000372755 MED12LQ86YW9 2145 aa8.15□□□□□ -1.11
VCL-202ENST00000372755 CXCL6P80162 114 aa8.14□□□□□ -1.11
VCL-202ENST00000372755 SMCR5Q8TEV8 140 aa8.14□□□□□ -1.11
VCL-202ENST00000372755 WNK1Q9H4A3 2382 aa8.14□□□□□ -1.11
VCL-202ENST00000372755 CRYGAP11844 174 aa8.13□□□□□ -1.11
VCL-202ENST00000372755 C22orf24Q9Y442 160 aa8.13□□□□□ -1.11
VCL-202ENST00000372755 PRLHP81277 87 aa8.13□□□□□ -1.11
VCL-202ENST00000372755 SORL1Q92673 2214 aa8.12□□□□□ -1.11
VCL-202ENST00000372755 PRR14LQ5THK1 2151 aa8.12□□□□□ -1.11
VCL-202ENST00000372755 C1orf64Q8NEQ6 169 aa8.12□□□□□ -1.11
VCL-202ENST00000372755 LINC00846Q9NV44 126 aa8.12□□□□□ -1.11
VCL-202ENST00000372755 A0A096LNJ9 63 aa8.11□□□□□ -1.11
VCL-202ENST00000372755 LINC00337Q8N6G1 96 aa8.11□□□□□ -1.11
VCL-202ENST00000372755 OTOGLQ3ZCN5 2332 aa8.1□□□□□ -1.11
VCL-202ENST00000372755 NOTCH2Q04721 2471 aa8.1□□□□□ -1.11
VCL-202ENST00000372755 CSPG4Q6UVK1 2322 aa8.09□□□□□ -1.11
VCL-202ENST00000372755 A8MTW9 85 aa8.09□□□□□ -1.11
VCL-202ENST00000372755 C7orf65Q6ZTY9 151 aa8.09□□□□□ -1.11
VCL-202ENST00000372755 SPG11Q96JI7 2443 aa8.09□□□□□ -1.11
VCL-202ENST00000372755 FHL3Q13643 280 aa8.09□□□□□ -1.11
VCL-202ENST00000372755 IGKV2D-30A0A075B6S6 120 aa8.09□□□□□ -1.11
VCL-202ENST00000372755 IGKV2-30P06310 120 aa8.09□□□□□ -1.11
VCL-202ENST00000372755 TP53AIP1Q9HCN2 124 aa8.09□□□□□ -1.12
VCL-202ENST00000372755 C10orf142B7Z368 130 aa8.07□□□□□ -1.12
VCL-202ENST00000372755 KIAA0087Q14695 138 aa8.07□□□□□ -1.12
VCL-202ENST00000372755 IGLV5-39A0A0G2JS06 123 aa8.07□□□□□ -1.12
VCL-202ENST00000372755 CUL9Q8IWT3 2517 aa8.06□□□□□ -1.12
VCL-202ENST00000372755 A0A1W2PPR1 153 aa8.06□□□□□ -1.12
VCL-202ENST00000372755 SMIM29Q86T20 159 aa8.06□□□□□ -1.12
VCL-202ENST00000372755 MUC22E2RYF6 1773 aaPredicted RBP8.06□□□□□ -1.12
VCL-202ENST00000372755 A0A1B0GU69 56 aa8.05□□□□□ -1.12
VCL-202ENST00000372755 KIF25-AS1Q9Y6Z4 181 aa8.05□□□□□ -1.12
VCL-202ENST00000372755 BDP1A6H8Y1 2624 aa8.05□□□□□ -1.12
VCL-202ENST00000372755 A0A1B0GW54 56 aa8.05□□□□□ -1.12
VCL-202ENST00000372755 C11orf72Q8NBR9 251 aa8.05□□□□□ -1.12
VCL-202ENST00000372755 SPATA3Q8NHX4 192 aa8.05□□□□□ -1.12
VCL-202ENST00000372755 ACYP2P14621 99 aa8.04□□□□□ -1.12
VCL-202ENST00000372755 PCDH15Q96QU1 1955 aa8.04□□□□□ -1.12
VCL-202ENST00000372755 LINC01546A6NGU7 62 aa8.04□□□□□ -1.12
VCL-202ENST00000372755 ATG2AQ2TAZ0 1938 aa8.03□□□□□ -1.12
VCL-202ENST00000372755 MDFIQ99750 246 aa8.03□□□□□ -1.12
VCL-202ENST00000372755 SONP18583 2426 aaKnown RBP8.03□□□□□ -1.12
VCL-202ENST00000372755 BCE1O60756 84 aa8.03□□□□□ -1.12
VCL-202ENST00000372755 NAV3Q8IVL0 2385 aa8.03□□□□□ -1.12
VCL-202ENST00000372755 SPACA4Q8TDM5 124 aa8.02□□□□□ -1.12
VCL-202ENST00000372755 LINC00167Q96N53 147 aa8.02□□□□□ -1.12
VCL-202ENST00000372755 TANC2Q9HCD6 1990 aa8.02□□□□□ -1.13
VCL-202ENST00000372755 MOBPQ13875 183 aa8.02□□□□□ -1.13
VCL-202ENST00000372755 IGHV3OR16-9A0A0B4J2B5 98 aa8.01□□□□□ -1.13
VCL-202ENST00000372755 PTPN13Q12923 2485 aa8.01□□□□□ -1.13
VCL-202ENST00000372755 HCFC1P51610 2035 aa8.01□□□□□ -1.13
VCL-202ENST00000372755 PCNX3Q9H6A9 2034 aa8.01□□□□□ -1.13
VCL-202ENST00000372755 PRRC2AP48634 2157 aaKnown RBP8□□□□□ -1.13
VCL-202ENST00000372755 H3BNG1 76 aa8□□□□□ -1.13
VCL-202ENST00000372755 Q9UF83 564 aa8□□□□□ -1.13
VCL-202ENST00000372755 ATRXP46100 2492 aa8□□□□□ -1.13
VCL-202ENST00000372755 H3BPC8 53 aa7.99□□□□□ -1.13
VCL-202ENST00000372755 HIVEP3Q5T1R4 2406 aa7.99□□□□□ -1.13
VCL-202ENST00000372755 NAV2Q8IVL1 2488 aa7.99□□□□□ -1.13
VCL-202ENST00000372755 C6orf48Q9UBA6 75 aa7.99□□□□□ -1.13
VCL-202ENST00000372755 PLXNB1O43157 2135 aa7.99□□□□□ -1.13
VCL-202ENST00000372755 ELOF1P60002 83 aaKnown RBP7.98□□□□□ -1.13
VCL-202ENST00000372755 CDIP1Q9H305 208 aa7.98□□□□□ -1.13
VCL-202ENST00000372755 CACNA1AO00555 2505 aa7.98□□□□□ -1.13
VCL-202ENST00000372755 SPAG11AQ6PDA7 123 aa7.98□□□□□ -1.13
VCL-202ENST00000372755 CEP192Q8TEP8 1941 aa7.98□□□□□ -1.13
VCL-202ENST00000372755 Q8NBF4 154 aa7.97□□□□□ -1.13
VCL-202ENST00000372755 FAM19A4Q96LR4 140 aa7.97□□□□□ -1.13
VCL-202ENST00000372755 TTC28Q96AY4 2481 aa7.97□□□□□ -1.13
VCL-202ENST00000372755 LRP4O75096 1905 aa7.96□□□□□ -1.13
VCL-202ENST00000372755 ARHGAP32A7KAX9 2087 aa7.96□□□□□ -1.14
VCL-202ENST00000372755 IGLV5-45A0A087WSX0 123 aa7.96□□□□□ -1.14
VCL-202ENST00000372755 PRO0628Q9UI54 55 aa7.96□□□□□ -1.14
VCL-202ENST00000372755 LINC00315P59091 139 aa7.95□□□□□ -1.14
VCL-202ENST00000372755 RAI1Q7Z5J4 1906 aaPredicted RBP7.94□□□□□ -1.14
VCL-202ENST00000372755 FAM229AH3BQW9 127 aa7.94□□□□□ -1.14
VCL-202ENST00000372755 LINC00313P59037 77 aa7.94□□□□□ -1.14
VCL-202ENST00000372755 LOC110117498A0A087WWA1 95 aa7.94□□□□□ -1.14
VCL-202ENST00000372755 Q6ZRX8 168 aa7.94□□□□□ -1.14
VCL-202ENST00000372755 LINC00476Q8WZB0 136 aa7.93□□□□□ -1.14
VCL-202ENST00000372755 Q6ZRP5 223 aa7.93□□□□□ -1.14
VCL-202ENST00000372755 EML5Q05BV3 1969 aa7.93□□□□□ -1.14
VCL-202ENST00000372755 Q6ZQT0 140 aa7.92□□□□□ -1.14
VCL-202ENST00000372755 RTL8CO15255 209 aa7.92□□□□□ -1.14
VCL-202ENST00000372755 PHF5AQ7RTV0 110 aaKnown RBP7.92□□□□□ -1.14
VCL-202ENST00000372755 TYMSOSQ8TAI1 123 aa7.91□□□□□ -1.14
VCL-202ENST00000372755 COL5A1P20908 1838 aaPredicted RBP7.91□□□□□ -1.14
VCL-202ENST00000372755 TRAV22A0A0B4J277 110 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms