RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 Q8N3U1 123 aa17.13■□□□□ 0.33
CTSA-203ENST00000372459 TOMM7Q9P0U1 55 aa17.13■□□□□ 0.33
CTSA-203ENST00000372459 DEFB121Q5J5C9 76 aa17.12■□□□□ 0.33
CTSA-203ENST00000372459 MDFIQ99750 246 aa17.11■□□□□ 0.33
CTSA-203ENST00000372459 TM2D3Q9BRN9 247 aa17.11■□□□□ 0.33
CTSA-203ENST00000372459 TRBV30A0A0K0K1B3 111 aa17.11■□□□□ 0.33
CTSA-203ENST00000372459 MEIG1Q5JSS6 88 aa17.11■□□□□ 0.33
CTSA-203ENST00000372459 Q1RN00 199 aa17.1■□□□□ 0.33
CTSA-203ENST00000372459 LINC01561Q8N1V8 128 aa17.1■□□□□ 0.33
CTSA-203ENST00000372459 DEFB131BA0A096LNP1 70 aa17.09■□□□□ 0.33
CTSA-203ENST00000372459 CARD19Q96LW7 228 aa17.09■□□□□ 0.33
CTSA-203ENST00000372459 H7C2G1 150 aa17.08■□□□□ 0.33
CTSA-203ENST00000372459 SLC25A20O43772 301 aa17.08■□□□□ 0.33
CTSA-203ENST00000372459 NPC2P61916 151 aa17.08■□□□□ 0.33
CTSA-203ENST00000372459 ATXN8Q156A1 80 aa17.08■□□□□ 0.33
CTSA-203ENST00000372459 CD164L2Q6UWJ8 174 aa17.08■□□□□ 0.33
CTSA-203ENST00000372459 DAND5Q8N907 189 aa17.08■□□□□ 0.33
CTSA-203ENST00000372459 NOTCH1P46531 2555 aa17.08■□□□□ 0.32
CTSA-203ENST00000372459 MRAPQ8TCY5 172 aa17.08■□□□□ 0.32
CTSA-203ENST00000372459 CHCHD10Q8WYQ3 142 aaPredicted RBP17.08■□□□□ 0.32
CTSA-203ENST00000372459 ANKRD29Q8N6D5 301 aa17.07■□□□□ 0.32
CTSA-203ENST00000372459 COPS9Q8WXC6 57 aa17.06■□□□□ 0.32
CTSA-203ENST00000372459 LINC01600Q96MT4 127 aa17.06■□□□□ 0.32
CTSA-203ENST00000372459 A0A0U1RRA0 63 aa17.05■□□□□ 0.32
CTSA-203ENST00000372459 C9JAW5 83 aa17.05■□□□□ 0.32
CTSA-203ENST00000372459 CDIP1Q9H305 208 aa17.05■□□□□ 0.32
CTSA-203ENST00000372459 TRIAP1O43715 76 aa17.04■□□□□ 0.32
CTSA-203ENST00000372459 LINC00308Q8TCZ7 52 aa17.04■□□□□ 0.32
CTSA-203ENST00000372459 IGLV10-54A0A075B6I4 117 aa17.03■□□□□ 0.32
CTSA-203ENST00000372459 COX7A2LO14548 114 aa17.03■□□□□ 0.32
CTSA-203ENST00000372459 LINC01620Q4KN68 170 aa17.02■□□□□ 0.32
CTSA-203ENST00000372459 C6orf226Q5I0X4 101 aa17.02■□□□□ 0.32
CTSA-203ENST00000372459 PRR34Q9NV39 138 aa17.02■□□□□ 0.32
CTSA-203ENST00000372459 KLK12Q9UKR0 248 aa17.02■□□□□ 0.32
CTSA-203ENST00000372459 TENM3Q9P273 2699 aa17.02■□□□□ 0.32
CTSA-203ENST00000372459 Q8IZM0 81 aa17.02■□□□□ 0.31
CTSA-203ENST00000372459 TRAV10A0A0B4J240 114 aa16.98■□□□□ 0.31
CTSA-203ENST00000372459 WFDC10BQ8IUB3 73 aa16.98■□□□□ 0.31
CTSA-203ENST00000372459 NBEAL1Q6ZS30 2694 aa16.98■□□□□ 0.31
CTSA-203ENST00000372459 COX6CP09669 75 aa16.98■□□□□ 0.31
CTSA-203ENST00000372459 MALP21145 153 aa16.98■□□□□ 0.31
CTSA-203ENST00000372459 ESRGQ1W209 222 aa16.98■□□□□ 0.31
CTSA-203ENST00000372459 PPDPFQ9H3Y8 114 aa16.98■□□□□ 0.31
CTSA-203ENST00000372459 TRBV10-2A0A0K0K1G8 114 aa16.97■□□□□ 0.31
CTSA-203ENST00000372459 IBA57-AS1B1ANH7 110 aa16.97■□□□□ 0.31
CTSA-203ENST00000372459 ENHOQ6UWT2 76 aa16.97■□□□□ 0.31
CTSA-203ENST00000372459 CRPP02741 224 aa16.96■□□□□ 0.31
CTSA-203ENST00000372459 SOSTDC1Q6X4U4 206 aa16.95■□□□□ 0.3
CTSA-203ENST00000372459 LINC00158P58513 81 aa16.94■□□□□ 0.3
CTSA-203ENST00000372459 RPL13AP40429 203 aaKnown RBP16.93■□□□□ 0.3
CTSA-203ENST00000372459 MIR7-3HGQ8N6C7 128 aa16.93■□□□□ 0.3
CTSA-203ENST00000372459 TRAV8-4A0A0B4J246 113 aa16.93■□□□□ 0.3
CTSA-203ENST00000372459 CFAP161Q6P656 301 aa16.93■□□□□ 0.3
CTSA-203ENST00000372459 CXCL5P42830 114 aa16.92■□□□□ 0.3
CTSA-203ENST00000372459 CKS1BP61024 79 aa16.92■□□□□ 0.3
CTSA-203ENST00000372459 C15orf53Q8NAA6 179 aa16.92■□□□□ 0.3
CTSA-203ENST00000372459 UBE2WQ96B02 151 aa16.92■□□□□ 0.3
CTSA-203ENST00000372459 HUWE1Q7Z6Z7 4374 aaKnown RBP16.92■□□□□ 0.3
CTSA-203ENST00000372459 KIAA0087Q14695 138 aa16.91■□□□□ 0.3
CTSA-203ENST00000372459 MGAM2Q2M2H8 2515 aa16.91■□□□□ 0.3
CTSA-203ENST00000372459 H3BT86 120 aa16.9■□□□□ 0.3
CTSA-203ENST00000372459 NTN5Q8WTR8 489 aaPredicted RBP16.9■□□□□ 0.3
CTSA-203ENST00000372459 LST1O00453 97 aa16.89■□□□□ 0.3
CTSA-203ENST00000372459 XGP55808 180 aa16.89■□□□□ 0.3
CTSA-203ENST00000372459 C2orf82Q6UX34 121 aa16.89■□□□□ 0.3
CTSA-203ENST00000372459 PFN2P35080 140 aa16.89■□□□□ 0.29
CTSA-203ENST00000372459 MT-ATP8P03928 68 aa16.88■□□□□ 0.29
CTSA-203ENST00000372459 KLK5Q9Y337 293 aaPredicted RBP16.88■□□□□ 0.29
CTSA-203ENST00000372459 LINC01556Q5JQF7 62 aa16.86■□□□□ 0.29
CTSA-203ENST00000372459 A0A1B0GV72 72 aa16.86■□□□□ 0.29
CTSA-203ENST00000372459 CLEC2BQ92478 149 aa16.84■□□□□ 0.29
CTSA-203ENST00000372459 SPAG11BQ08648 103 aa16.83■□□□□ 0.28
CTSA-203ENST00000372459 SND1-IT1Q9HBX3 110 aa16.83■□□□□ 0.28
CTSA-203ENST00000372459 CCL18P55774 89 aa16.81■□□□□ 0.28
CTSA-203ENST00000372459 COX17Q14061 63 aa16.81■□□□□ 0.28
CTSA-203ENST00000372459 TEX49A0A1B0GTD5 131 aa16.8■□□□□ 0.28
CTSA-203ENST00000372459 DNAH10OSP0CZ25 163 aa16.78■□□□□ 0.28
CTSA-203ENST00000372459 B9D2Q9BPU9 175 aa16.78■□□□□ 0.28
CTSA-203ENST00000372459 TRAV13-2A0A0B4J235 113 aa16.78■□□□□ 0.28
CTSA-203ENST00000372459 KRTAP26-1Q6PEX3 210 aa16.77■□□□□ 0.27
CTSA-203ENST00000372459 LINC00588Q9Y4M8 146 aa16.77■□□□□ 0.27
CTSA-203ENST00000372459 C6orf223Q8N319 242 aa16.75■□□□□ 0.27
CTSA-203ENST00000372459 C1orf43Q9BWL3 253 aa16.75■□□□□ 0.27
CTSA-203ENST00000372459 IGKV2-28A0A075B6P5 120 aa16.74■□□□□ 0.27
CTSA-203ENST00000372459 IGKV2D-28P01615 120 aa16.74■□□□□ 0.27
CTSA-203ENST00000372459 UNQ6190/PRO20217Q6UXQ8 127 aa16.73■□□□□ 0.27
CTSA-203ENST00000372459 C9orf116Q5BN46 136 aaPredicted RBP16.72■□□□□ 0.27
CTSA-203ENST00000372459 LINC00526Q96FQ7 95 aa16.72■□□□□ 0.27
CTSA-203ENST00000372459 C10orf25Q5T742 122 aa16.71■□□□□ 0.27
CTSA-203ENST00000372459 LINC00337Q8N6G1 96 aa16.71■□□□□ 0.27
CTSA-203ENST00000372459 DNAH9Q9NYC9 4486 aa16.7■□□□□ 0.26
CTSA-203ENST00000372459 FAM240AA0A1B0GVK7 77 aa16.7■□□□□ 0.26
CTSA-203ENST00000372459 MUC7Q8TAX7 377 aa16.7■□□□□ 0.26
CTSA-203ENST00000372459 IGKV2D-24A0A075B6R9 120 aa16.69■□□□□ 0.26
CTSA-203ENST00000372459 GVQW2A0A096LPI5 108 aaPredicted RBP16.68■□□□□ 0.26
CTSA-203ENST00000372459 ZNF561-AS1K7EIQ3 104 aa16.68■□□□□ 0.26
CTSA-203ENST00000372459 TRACP01848 142 aa16.68■□□□□ 0.26
CTSA-203ENST00000372459 SNCGO76070 127 aa16.68■□□□□ 0.26
CTSA-203ENST00000372459 UPK3BQ9BT76 320 aa16.66■□□□□ 0.26
CTSA-203ENST00000372459 HIGD2BQ4VC39 106 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms