RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 C5orf38Q86SI9 138 aa12.55□□□□□ -0.4
CD40-201ENST00000372276 CUBNO60494 3623 aa12.54□□□□□ -0.4
CD40-201ENST00000372276 IGHV4-28A0A0C4DH34 117 aa12.53□□□□□ -0.4
CD40-201ENST00000372276 H0YGX0 51 aa12.53□□□□□ -0.4
CD40-201ENST00000372276 SPART-AS1P0CW21 52 aa12.53□□□□□ -0.4
CD40-201ENST00000372276 DEFB135Q30KP9 77 aa12.53□□□□□ -0.4
CD40-201ENST00000372276 TEX49A0A1B0GTD5 131 aa12.52□□□□□ -0.4
CD40-201ENST00000372276 A0A1B0GV72 72 aa12.52□□□□□ -0.4
CD40-201ENST00000372276 CD164L2Q6UWJ8 174 aa12.52□□□□□ -0.4
CD40-201ENST00000372276 ACYP1P07311 99 aa12.51□□□□□ -0.41
CD40-201ENST00000372276 COX17Q14061 63 aa12.51□□□□□ -0.41
CD40-201ENST00000372276 XGP55808 180 aa12.51□□□□□ -0.41
CD40-201ENST00000372276 MUC7Q8TAX7 377 aa12.51□□□□□ -0.41
CD40-201ENST00000372276 XCL1P47992 114 aa12.5□□□□□ -0.41
CD40-201ENST00000372276 CCL18P55774 89 aa12.5□□□□□ -0.41
CD40-201ENST00000372276 MT-ATP8P03928 68 aa12.49□□□□□ -0.41
CD40-201ENST00000372276 Q8NAQ8 132 aa12.49□□□□□ -0.41
CD40-201ENST00000372276 CKS1BP61024 79 aa12.48□□□□□ -0.41
CD40-201ENST00000372276 SNCGO76070 127 aa12.48□□□□□ -0.41
CD40-201ENST00000372276 CFAP161Q6P656 301 aa12.48□□□□□ -0.41
CD40-201ENST00000372276 IGKV2-28A0A075B6P5 120 aa12.47□□□□□ -0.41
CD40-201ENST00000372276 IGKV2D-28P01615 120 aa12.47□□□□□ -0.41
CD40-201ENST00000372276 KRTAP21-3Q3LHN1 58 aa12.47□□□□□ -0.41
CD40-201ENST00000372276 LELP1Q5T871 98 aa12.47□□□□□ -0.41
CD40-201ENST00000372276 Q6Q795 121 aa12.46□□□□□ -0.41
CD40-201ENST00000372276 LINC00337Q8N6G1 96 aa12.46□□□□□ -0.41
CD40-201ENST00000372276 PFN2P35080 140 aa12.45□□□□□ -0.42
CD40-201ENST00000372276 LINC00269Q8N2A0 174 aa12.45□□□□□ -0.42
CD40-201ENST00000372276 NDUFC2O95298 119 aa12.44□□□□□ -0.42
CD40-201ENST00000372276 ANGP03950 147 aaKnown RBP12.44□□□□□ -0.42
CD40-201ENST00000372276 BAALC-AS2P0C853 105 aa12.44□□□□□ -0.42
CD40-201ENST00000372276 INAFM2P0DMQ5 153 aa12.44□□□□□ -0.42
CD40-201ENST00000372276 REG3AQ06141 175 aa12.44□□□□□ -0.42
CD40-201ENST00000372276 CHCHD10Q8WYQ3 142 aaPredicted RBP12.44□□□□□ -0.42
CD40-201ENST00000372276 MALP21145 153 aa12.44□□□□□ -0.42
CD40-201ENST00000372276 ATRQ13535 2644 aa12.43□□□□□ -0.42
CD40-201ENST00000372276 DNAL4O96015 105 aa12.43□□□□□ -0.42
CD40-201ENST00000372276 SPATA3Q8NHX4 192 aa12.43□□□□□ -0.42
CD40-201ENST00000372276 A0A096LPF7 62 aa12.42□□□□□ -0.42
CD40-201ENST00000372276 IGHV4-30-4P0DP06 118 aa12.42□□□□□ -0.42
CD40-201ENST00000372276 SMIM11BQ8TCY0 68 aa12.42□□□□□ -0.42
CD40-201ENST00000372276 KLK5Q9Y337 293 aaPredicted RBP12.42□□□□□ -0.42
CD40-201ENST00000372276 H3BNG1 76 aa12.41□□□□□ -0.42
CD40-201ENST00000372276 GAGE2BQ13066 116 aa12.41□□□□□ -0.42
CD40-201ENST00000372276 GAGE2EQ4V326 116 aa12.41□□□□□ -0.42
CD40-201ENST00000372276 GAGE2DQ9UEU5 116 aa12.41□□□□□ -0.42
CD40-201ENST00000372276 A0A1B0GX51 115 aa12.4□□□□□ -0.42
CD40-201ENST00000372276 KIAA0087Q14695 138 aa12.4□□□□□ -0.42
CD40-201ENST00000372276 DEFB4AO15263 64 aa12.4□□□□□ -0.42
CD40-201ENST00000372276 FBN1P35555 2871 aaKnown RBP12.39□□□□□ -0.43
CD40-201ENST00000372276 CELA1Q9UNI1 258 aa12.39□□□□□ -0.43
CD40-201ENST00000372276 C15orf53Q8NAA6 179 aa12.38□□□□□ -0.43
CD40-201ENST00000372276 OR13C6PQ8NH95 151 aa12.38□□□□□ -0.43
CD40-201ENST00000372276 CLPSL2Q6UWE3 100 aa12.37□□□□□ -0.43
CD40-201ENST00000372276 KRTAP24-1Q3LI83 254 aa12.37□□□□□ -0.43
CD40-201ENST00000372276 FAM218AQ96MZ4 157 aa12.37□□□□□ -0.43
CD40-201ENST00000372276 PRR34Q9NV39 138 aa12.37□□□□□ -0.43
CD40-201ENST00000372276 TMEM126AQ9H061 195 aa12.36□□□□□ -0.43
CD40-201ENST00000372276 C11orf68Q9H3H3 251 aaKnown RBP12.35□□□□□ -0.43
CD40-201ENST00000372276 MDFIQ99750 246 aa12.33□□□□□ -0.43
CD40-201ENST00000372276 IMUPQ9GZP8 106 aa12.33□□□□□ -0.43
CD40-201ENST00000372276 COL6A5A8TX70 2615 aa12.33□□□□□ -0.44
CD40-201ENST00000372276 HTN3P15516 51 aa12.33□□□□□ -0.44
CD40-201ENST00000372276 A0A0J9YWU9 116 aa12.32□□□□□ -0.44
CD40-201ENST00000372276 TTC32Q5I0X7 151 aa12.32□□□□□ -0.44
CD40-201ENST00000372276 GVQW2A0A096LPI5 108 aaPredicted RBP12.31□□□□□ -0.44
CD40-201ENST00000372276 LYPD5Q6UWN5 251 aa12.31□□□□□ -0.44
CD40-201ENST00000372276 IGLV10-54A0A075B6I4 117 aa12.3□□□□□ -0.44
CD40-201ENST00000372276 SPAG11BQ08648 103 aa12.3□□□□□ -0.44
CD40-201ENST00000372276 A0A087WYN8 130 aa12.29□□□□□ -0.44
CD40-201ENST00000372276 TRBV7-7A0A0K0K1E9 115 aa12.29□□□□□ -0.44
CD40-201ENST00000372276 LINC00643Q86TS7 51 aa12.29□□□□□ -0.44
CD40-201ENST00000372276 ANAPC13Q9BS18 74 aa12.29□□□□□ -0.44
CD40-201ENST00000372276 Q9HAA7 133 aa12.29□□□□□ -0.44
CD40-201ENST00000372276 ORMDL1Q9P0S3 153 aa12.29□□□□□ -0.44
CD40-201ENST00000372276 LECT2O14960 151 aa12.28□□□□□ -0.44
CD40-201ENST00000372276 EGFEM1PQ0D2K5 195 aa12.28□□□□□ -0.44
CD40-201ENST00000372276 OBSCN-AS1Q96MR7 158 aa12.28□□□□□ -0.44
CD40-201ENST00000372276 LINC00167Q96N53 147 aa12.28□□□□□ -0.44
CD40-201ENST00000372276 C22orf24Q9Y442 160 aa12.28□□□□□ -0.44
CD40-201ENST00000372276 SDIM1Q6ZPB5 146 aa12.27□□□□□ -0.44
CD40-201ENST00000372276 KLK12Q9UKR0 248 aa12.27□□□□□ -0.44
CD40-201ENST00000372276 H3BQ85 93 aa12.26□□□□□ -0.45
CD40-201ENST00000372276 NDUFV3P56181 108 aaKnown RBP12.25□□□□□ -0.45
CD40-201ENST00000372276 ENHOQ6UWT2 76 aa12.25□□□□□ -0.45
CD40-201ENST00000372276 F8WDY8 70 aa12.23□□□□□ -0.45
CD40-201ENST00000372276 JMJD7-PLA2G4BH0Y9G9 81 aa12.23□□□□□ -0.45
CD40-201ENST00000372276 TMEM256-PLSCR3K7ERE1 68 aa12.23□□□□□ -0.45
CD40-201ENST00000372276 S100A7L2Q5SY68 101 aa12.23□□□□□ -0.45
CD40-201ENST00000372276 Q8N3U1 123 aa12.23□□□□□ -0.45
CD40-201ENST00000372276 KPRPQ5T749 579 aaPredicted RBP12.22□□□□□ -0.45
CD40-201ENST00000372276 NANOS2P60321 138 aaKnown RBP12.22□□□□□ -0.45
CD40-201ENST00000372276 Q8N814 137 aa12.22□□□□□ -0.45
CD40-201ENST00000372276 UNQ6190/PRO20217Q6UXQ8 127 aa12.21□□□□□ -0.46
CD40-201ENST00000372276 GAGE2AQ6NT46 116 aa12.2□□□□□ -0.46
CD40-201ENST00000372276 STAB1Q9NY15 2570 aa12.2□□□□□ -0.46
CD40-201ENST00000372276 TENM1Q9UKZ4 2725 aa12.2□□□□□ -0.46
CD40-201ENST00000372276 KRTAP10-11P60412 298 aa12.19□□□□□ -0.46
CD40-201ENST00000372276 OXLD1Q5BKU9 147 aa12.19□□□□□ -0.46
CD40-201ENST00000372276 C3orf56Q8N813 242 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms