RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 IFITM1P13164 125 aa12.75□□□□□ -0.37
VEGFA-206ENST00000372077 MEIG1Q5JSS6 88 aa12.75□□□□□ -0.37
VEGFA-206ENST00000372077 A0A096LPF7 62 aa12.75□□□□□ -0.37
VEGFA-206ENST00000372077 TEX49A0A1B0GTD5 131 aa12.75□□□□□ -0.37
VEGFA-206ENST00000372077 NTN5Q8WTR8 489 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-206ENST00000372077 COL7A1Q02388 2944 aa12.74□□□□□ -0.37
VEGFA-206ENST00000372077 LITAFQ99732 161 aa12.72□□□□□ -0.37
VEGFA-206ENST00000372077 TRBV6-8A0A0A6YYG3 113 aa12.71□□□□□ -0.37
VEGFA-206ENST00000372077 IGHV1-58A0A0C4DH39 117 aa12.71□□□□□ -0.37
VEGFA-206ENST00000372077 TMEM262E9PQX1 116 aa12.71□□□□□ -0.37
VEGFA-206ENST00000372077 LYRM7Q5U5X0 104 aa12.71□□□□□ -0.37
VEGFA-206ENST00000372077 SNCGO76070 127 aa12.71□□□□□ -0.37
VEGFA-206ENST00000372077 MRPS36P82909 103 aaKnown RBP12.71□□□□□ -0.37
VEGFA-206ENST00000372077 Q9H8V8 135 aa12.7□□□□□ -0.38
VEGFA-206ENST00000372077 TMEM101Q96IK0 257 aa12.69□□□□□ -0.38
VEGFA-206ENST00000372077 TMEM243Q9BU79 118 aa12.69□□□□□ -0.38
VEGFA-206ENST00000372077 TOMM7Q9P0U1 55 aa12.68□□□□□ -0.38
VEGFA-206ENST00000372077 PYGO1Q9Y3Y4 419 aa12.68□□□□□ -0.38
VEGFA-206ENST00000372077 RPL13AP40429 203 aaKnown RBP12.67□□□□□ -0.38
VEGFA-206ENST00000372077 H7C423 109 aa12.67□□□□□ -0.38
VEGFA-206ENST00000372077 TIRAPP58753 221 aa12.67□□□□□ -0.38
VEGFA-206ENST00000372077 C15orf53Q8NAA6 179 aa12.66□□□□□ -0.38
VEGFA-206ENST00000372077 SPANXA1Q9NS26 97 aa12.66□□□□□ -0.38
VEGFA-206ENST00000372077 LYPD5Q6UWN5 251 aa12.66□□□□□ -0.38
VEGFA-206ENST00000372077 LINC01620Q4KN68 170 aa12.66□□□□□ -0.38
VEGFA-206ENST00000372077 STAB2Q8WWQ8 2551 aa12.65□□□□□ -0.38
VEGFA-206ENST00000372077 TMEM126AQ9H061 195 aa12.65□□□□□ -0.38
VEGFA-206ENST00000372077 LINC00242Q5T6M2 205 aa12.64□□□□□ -0.39
VEGFA-206ENST00000372077 LELP1Q5T871 98 aa12.64□□□□□ -0.39
VEGFA-206ENST00000372077 TINCRA0A1B0GVN0 87 aa12.63□□□□□ -0.39
VEGFA-206ENST00000372077 UBE2L6O14933 153 aa12.63□□□□□ -0.39
VEGFA-206ENST00000372077 CHCHD5Q9BSY4 110 aa12.63□□□□□ -0.39
VEGFA-206ENST00000372077 MIAQ16674 131 aa12.62□□□□□ -0.39
VEGFA-206ENST00000372077 LOC107984640A0A0U1RRK4 108 aa12.62□□□□□ -0.39
VEGFA-206ENST00000372077 CLPSL2Q6UWE3 100 aa12.62□□□□□ -0.39
VEGFA-206ENST00000372077 C2orf82Q6UX34 121 aa12.62□□□□□ -0.39
VEGFA-206ENST00000372077 FBN3Q75N90 2809 aa12.61□□□□□ -0.39
VEGFA-206ENST00000372077 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.61□□□□□ -0.39
VEGFA-206ENST00000372077 A0A0B4J2C4 111 aa12.61□□□□□ -0.39
VEGFA-206ENST00000372077 ATXN8Q156A1 80 aa12.61□□□□□ -0.39
VEGFA-206ENST00000372077 ESRGQ1W209 222 aa12.61□□□□□ -0.39
VEGFA-206ENST00000372077 SOSTDC1Q6X4U4 206 aa12.6□□□□□ -0.39
VEGFA-206ENST00000372077 Q6Q795 121 aa12.59□□□□□ -0.39
VEGFA-206ENST00000372077 CDC42SE2Q9NRR3 84 aa12.58□□□□□ -0.4
VEGFA-206ENST00000372077 A0A1B0GUV1 79 aa12.57□□□□□ -0.4
VEGFA-206ENST00000372077 NUPR2A6NF83 97 aa12.57□□□□□ -0.4
VEGFA-206ENST00000372077 DYNC2H1Q8NCM8 4307 aaKnown RBP12.57□□□□□ -0.4
VEGFA-206ENST00000372077 TRAV8-4A0A0B4J246 113 aa12.57□□□□□ -0.4
VEGFA-206ENST00000372077 SMIM1B2RUZ4 78 aa12.56□□□□□ -0.4
VEGFA-206ENST00000372077 APLNQ9ULZ1 77 aa12.56□□□□□ -0.4
VEGFA-206ENST00000372077 IGLV4-60A0A075B6I1 120 aa12.56□□□□□ -0.4
VEGFA-206ENST00000372077 LINC00308Q8TCZ7 52 aa12.56□□□□□ -0.4
VEGFA-206ENST00000372077 C5orf38Q86SI9 138 aa12.55□□□□□ -0.4
VEGFA-206ENST00000372077 TRBV10-2A0A0K0K1G8 114 aa12.54□□□□□ -0.4
VEGFA-206ENST00000372077 PFN2P35080 140 aa12.54□□□□□ -0.4
VEGFA-206ENST00000372077 FAM19A5Q7Z5A7 132 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-206ENST00000372077 KLK5Q9Y337 293 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-206ENST00000372077 UBE2WQ96B02 151 aa12.54□□□□□ -0.4
VEGFA-206ENST00000372077 DNAH7Q8WXX0 4024 aa12.53□□□□□ -0.4
VEGFA-206ENST00000372077 Q9HAA7 133 aa12.53□□□□□ -0.4
VEGFA-206ENST00000372077 TRBV30A0A0K0K1B3 111 aa12.52□□□□□ -0.4
VEGFA-206ENST00000372077 COX6CP09669 75 aa12.52□□□□□ -0.4
VEGFA-206ENST00000372077 LINC00588Q9Y4M8 146 aa12.52□□□□□ -0.4
VEGFA-206ENST00000372077 WFDC10BQ8IUB3 73 aa12.52□□□□□ -0.41
VEGFA-206ENST00000372077 SPANXDQ9BXN6 97 aa12.52□□□□□ -0.41
VEGFA-206ENST00000372077 SPANXCQ9NY87 97 aa12.52□□□□□ -0.41
VEGFA-206ENST00000372077 CIRBPQ14011 172 aaKnown RBP12.52□□□□□ -0.41
VEGFA-206ENST00000372077 CCL18P55774 89 aa12.51□□□□□ -0.41
VEGFA-206ENST00000372077 Q8N3U1 123 aa12.51□□□□□ -0.41
VEGFA-206ENST00000372077 NDUFA1O15239 70 aa12.51□□□□□ -0.41
VEGFA-206ENST00000372077 HERVK_113P63121 156 aa12.5□□□□□ -0.41
VEGFA-206ENST00000372077 FAM19A3Q7Z5A8 133 aa12.48□□□□□ -0.41
VEGFA-206ENST00000372077 UPK3BQ9BT76 320 aa12.48□□□□□ -0.41
VEGFA-206ENST00000372077 LINC00158P58513 81 aa12.47□□□□□ -0.41
VEGFA-206ENST00000372077 MIR7-3HGQ8N6C7 128 aa12.47□□□□□ -0.41
VEGFA-206ENST00000372077 MUC7Q8TAX7 377 aa12.47□□□□□ -0.41
VEGFA-206ENST00000372077 FAM218AQ96MZ4 157 aa12.47□□□□□ -0.41
VEGFA-206ENST00000372077 WWC2-AS2Q96NR7 200 aa12.47□□□□□ -0.41
VEGFA-206ENST00000372077 XCL1P47992 114 aa12.47□□□□□ -0.41
VEGFA-206ENST00000372077 LINC01556Q5JQF7 62 aa12.47□□□□□ -0.41
VEGFA-206ENST00000372077 J3KT08 172 aa12.46□□□□□ -0.42
VEGFA-206ENST00000372077 ANGP03950 147 aaKnown RBP12.46□□□□□ -0.42
VEGFA-206ENST00000372077 LST1O00453 97 aa12.45□□□□□ -0.42
VEGFA-206ENST00000372077 DNAH10OSP0CZ25 163 aa12.45□□□□□ -0.42
VEGFA-206ENST00000372077 CSMD3Q7Z407 3707 aa12.45□□□□□ -0.42
VEGFA-206ENST00000372077 IGLV10-54A0A075B6I4 117 aa12.45□□□□□ -0.42
VEGFA-206ENST00000372077 LINC00269Q8N2A0 174 aa12.45□□□□□ -0.42
VEGFA-206ENST00000372077 IGLV5-39A0A0G2JS06 123 aa12.44□□□□□ -0.42
VEGFA-206ENST00000372077 C9orf153Q5TBE3 101 aa12.44□□□□□ -0.42
VEGFA-206ENST00000372077 PRR34Q9NV39 138 aa12.44□□□□□ -0.42
VEGFA-206ENST00000372077 LINC00959A0A1B0GUT2 108 aa12.43□□□□□ -0.42
VEGFA-206ENST00000372077 IGLV5-45A0A087WSX0 123 aa12.43□□□□□ -0.42
VEGFA-206ENST00000372077 PRR3P79522 188 aaKnown RBP12.43□□□□□ -0.42
VEGFA-206ENST00000372077 KLK12Q9UKR0 248 aa12.43□□□□□ -0.42
VEGFA-206ENST00000372077 REG3AQ06141 175 aa12.43□□□□□ -0.42
VEGFA-206ENST00000372077 OR13C6PQ8NH95 151 aa12.43□□□□□ -0.42
VEGFA-206ENST00000372077 PLECQ15149 4684 aaKnown RBP12.41□□□□□ -0.42
VEGFA-206ENST00000372077 LINC00337Q8N6G1 96 aa12.41□□□□□ -0.42
VEGFA-206ENST00000372077 STARD9Q9P2P6 4700 aa12.41□□□□□ -0.42
VEGFA-206ENST00000372077 SLPIP03973 132 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms