RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 WFDC9Q8NEX5 89 aa9□□□□□ -0.97
GPC3-201ENST00000370818 COX7A2LO14548 114 aa9□□□□□ -0.97
GPC3-201ENST00000370818 DEFB130BP0DP73 79 aa9□□□□□ -0.97
GPC3-201ENST00000370818 DEFB130AP0DP74 79 aa9□□□□□ -0.97
GPC3-201ENST00000370818 TIRAPP58753 221 aa9□□□□□ -0.97
GPC3-201ENST00000370818 DGAT2L7PQ6IED9 249 aa9□□□□□ -0.97
GPC3-201ENST00000370818 C4orf26Q17RF5 130 aa8.99□□□□□ -0.97
GPC3-201ENST00000370818 VSIG2Q96IQ7 327 aa8.99□□□□□ -0.97
GPC3-201ENST00000370818 BAALC-AS2P0C853 105 aa8.99□□□□□ -0.97
GPC3-201ENST00000370818 TMEM258P61165 79 aa8.99□□□□□ -0.97
GPC3-201ENST00000370818 DAND5Q8N907 189 aa8.99□□□□□ -0.97
GPC3-201ENST00000370818 NBEAL2Q6ZNJ1 2754 aa8.98□□□□□ -0.97
GPC3-201ENST00000370818 IGLV5-45A0A087WSX0 123 aa8.97□□□□□ -0.97
GPC3-201ENST00000370818 F5H768 121 aa8.97□□□□□ -0.97
GPC3-201ENST00000370818 UPK3BQ9BT76 320 aa8.97□□□□□ -0.97
GPC3-201ENST00000370818 CDKN2A-AS1Q9UH64 79 aa8.97□□□□□ -0.97
GPC3-201ENST00000370818 TIMM17BO60830 172 aa8.97□□□□□ -0.97
GPC3-201ENST00000370818 COX6A2Q02221 97 aa8.97□□□□□ -0.97
GPC3-201ENST00000370818 RPL18AQ02543 176 aaKnown RBP8.97□□□□□ -0.97
GPC3-201ENST00000370818 DEFB135Q30KP9 77 aa8.97□□□□□ -0.97
GPC3-201ENST00000370818 TMEM243Q9BU79 118 aa8.97□□□□□ -0.97
GPC3-201ENST00000370818 CDC42SE2Q9NRR3 84 aa8.97□□□□□ -0.97
GPC3-201ENST00000370818 LINC00242Q5T6M2 205 aa8.96□□□□□ -0.97
GPC3-201ENST00000370818 Q5XG85 94 aa8.96□□□□□ -0.97
GPC3-201ENST00000370818 DSCR8Q96T75 97 aa8.96□□□□□ -0.97
GPC3-201ENST00000370818 TRAV13-1A0A0B4J241 112 aa8.95□□□□□ -0.98
GPC3-201ENST00000370818 FAM19A3Q7Z5A8 133 aa8.95□□□□□ -0.98
GPC3-201ENST00000370818 APOC4P55056 127 aa8.95□□□□□ -0.98
GPC3-201ENST00000370818 HRCT1Q6UXD1 115 aa8.95□□□□□ -0.98
GPC3-201ENST00000370818 FAM222AQ5U5X8 452 aa8.94□□□□□ -0.98
GPC3-201ENST00000370818 SERP2Q8N6R1 65 aa8.94□□□□□ -0.98
GPC3-201ENST00000370818 TRBV6-8A0A0A6YYG3 113 aa8.94□□□□□ -0.98
GPC3-201ENST00000370818 UBE2L6O14933 153 aa8.94□□□□□ -0.98
GPC3-201ENST00000370818 INAFM2P0DMQ5 153 aa8.94□□□□□ -0.98
GPC3-201ENST00000370818 DEFB4AO15263 64 aa8.93□□□□□ -0.98
GPC3-201ENST00000370818 LINC00308Q8TCZ7 52 aa8.93□□□□□ -0.98
GPC3-201ENST00000370818 FAM218AQ96MZ4 157 aa8.93□□□□□ -0.98
GPC3-201ENST00000370818 LYRM9A8MSI8 78 aa8.92□□□□□ -0.98
GPC3-201ENST00000370818 KRTAP24-1Q3LI83 254 aa8.92□□□□□ -0.98
GPC3-201ENST00000370818 IGHV4-28A0A0C4DH34 117 aa8.92□□□□□ -0.98
GPC3-201ENST00000370818 IGHV4-30-4P0DP06 118 aa8.91□□□□□ -0.98
GPC3-201ENST00000370818 GYPEP15421 78 aa8.91□□□□□ -0.98
GPC3-201ENST00000370818 IGLV5-39A0A0G2JS06 123 aa8.91□□□□□ -0.98
GPC3-201ENST00000370818 Q8NAQ8 132 aa8.91□□□□□ -0.98
GPC3-201ENST00000370818 PRO0255Q9UI72 69 aa8.91□□□□□ -0.98
GPC3-201ENST00000370818 IGLV4-60A0A075B6I1 120 aa8.9□□□□□ -0.98
GPC3-201ENST00000370818 IGKV3D-7A0A0C4DH55 119 aa8.9□□□□□ -0.98
GPC3-201ENST00000370818 NDUFA1O15239 70 aa8.9□□□□□ -0.98
GPC3-201ENST00000370818 SMIM1B2RUZ4 78 aa8.9□□□□□ -0.99
GPC3-201ENST00000370818 CIRBPQ14011 172 aaKnown RBP8.9□□□□□ -0.99
GPC3-201ENST00000370818 FBN1P35555 2871 aaKnown RBP8.89□□□□□ -0.99
GPC3-201ENST00000370818 A0A087WVE0 104 aa8.89□□□□□ -0.99
GPC3-201ENST00000370818 OXLD1Q5BKU9 147 aa8.89□□□□□ -0.99
GPC3-201ENST00000370818 SOSTDC1Q6X4U4 206 aa8.89□□□□□ -0.99
GPC3-201ENST00000370818 LINC01561Q8N1V8 128 aa8.89□□□□□ -0.99
GPC3-201ENST00000370818 MALP21145 153 aa8.89□□□□□ -0.99
GPC3-201ENST00000370818 MRAPQ8TCY5 172 aa8.88□□□□□ -0.99
GPC3-201ENST00000370818 Q9HAA7 133 aa8.88□□□□□ -0.99
GPC3-201ENST00000370818 CELA1Q9UNI1 258 aa8.88□□□□□ -0.99
GPC3-201ENST00000370818 A0A0U1RRA0 63 aa8.88□□□□□ -0.99
GPC3-201ENST00000370818 MIFP14174 115 aa8.88□□□□□ -0.99
GPC3-201ENST00000370818 Q6JHZ5 121 aa8.88□□□□□ -0.99
GPC3-201ENST00000370818 PRIMA1Q86XR5 153 aa8.88□□□□□ -0.99
GPC3-201ENST00000370818 USP17L23D6RBM5 183 aa8.87□□□□□ -0.99
GPC3-201ENST00000370818 KRTAP10-11P60412 298 aa8.87□□□□□ -0.99
GPC3-201ENST00000370818 C9orf129Q5T035 196 aaKnown RBP8.87□□□□□ -0.99
GPC3-201ENST00000370818 LINC00846Q9NV44 126 aa8.87□□□□□ -0.99
GPC3-201ENST00000370818 A0A096LPF7 62 aa8.86□□□□□ -0.99
GPC3-201ENST00000370818 PAX4O43316 350 aa8.86□□□□□ -0.99
GPC3-201ENST00000370818 ZNF625Q96I27 306 aaPredicted RBP8.86□□□□□ -0.99
GPC3-201ENST00000370818 Q9H8V8 135 aa8.86□□□□□ -0.99
GPC3-201ENST00000370818 DAD1P61803 113 aa8.86□□□□□ -0.99
GPC3-201ENST00000370818 IGKV3OR2-268A0A0C4DH90 116 aa8.85□□□□□ -0.99
GPC3-201ENST00000370818 DNAL4O96015 105 aa8.85□□□□□ -0.99
GPC3-201ENST00000370818 CMYA5Q8N3K9 4069 aa8.85□□□□□ -0.99
GPC3-201ENST00000370818 C14orf132Q9NPU4 83 aa8.84□□□□□ -0.99
GPC3-201ENST00000370818 ANK2Q01484 3957 aa8.84□□□□□ -0.99
GPC3-201ENST00000370818 CYSRT1A8MQ03 144 aa8.83□□□□□ -1
GPC3-201ENST00000370818 IGHV3OR16-9A0A0B4J2B5 98 aa8.83□□□□□ -1
GPC3-201ENST00000370818 SPART-AS1P0CW21 52 aa8.83□□□□□ -1
GPC3-201ENST00000370818 A0A1B0GUV1 79 aa8.82□□□□□ -1
GPC3-201ENST00000370818 COPS9Q8WXC6 57 aa8.82□□□□□ -1
GPC3-201ENST00000370818 OBSCN-AS1Q96MR7 158 aa8.82□□□□□ -1
GPC3-201ENST00000370818 STAB1Q9NY15 2570 aa8.82□□□□□ -1
GPC3-201ENST00000370818 EGFEM1PQ0D2K5 195 aa8.82□□□□□ -1
GPC3-201ENST00000370818 RPL28P46779 137 aaKnown RBP8.81□□□□□ -1
GPC3-201ENST00000370818 LINC00959A0A1B0GUT2 108 aa8.81□□□□□ -1
GPC3-201ENST00000370818 NDUFC2-KCTD14E9PQ53 114 aa8.8□□□□□ -1
GPC3-201ENST00000370818 NDUFC2O95298 119 aa8.79□□□□□ -1
GPC3-201ENST00000370818 PFN2P35080 140 aa8.79□□□□□ -1
GPC3-201ENST00000370818 PKD1L1Q8TDX9 2849 aa8.79□□□□□ -1
GPC3-201ENST00000370818 A0A087WYN8 130 aa8.79□□□□□ -1
GPC3-201ENST00000370818 A0A087WZ39 114 aa8.79□□□□□ -1
GPC3-201ENST00000370818 HTN3P15516 51 aa8.79□□□□□ -1
GPC3-201ENST00000370818 RETNQ9HD89 108 aa8.79□□□□□ -1
GPC3-201ENST00000370818 LINC00336Q6ZUF6 198 aa8.78□□□□□ -1
GPC3-201ENST00000370818 Q8N3U1 123 aa8.78□□□□□ -1
GPC3-201ENST00000370818 PRO0628Q9UI54 55 aa8.78□□□□□ -1
GPC3-201ENST00000370818 EPM2AB3EWF7 344 aa8.78□□□□□ -1
GPC3-201ENST00000370818 COX7B2Q8TF08 81 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms