RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 PLAC8L1A1L4L8 177 aa7.07□□□□□ -1.28
PRPF38B-203ENST00000370025 HTN3P15516 51 aa7.07□□□□□ -1.28
PRPF38B-203ENST00000370025 C2orf48Q96LS8 159 aa7.07□□□□□ -1.28
PRPF38B-203ENST00000370025 PKIGQ9Y2B9 76 aa7.07□□□□□ -1.28
PRPF38B-203ENST00000370025 ACYP1P07311 99 aa7.07□□□□□ -1.28
PRPF38B-203ENST00000370025 TEP1Q99973 2627 aaKnown RBP7.07□□□□□ -1.28
PRPF38B-203ENST00000370025 TRBV10-1A0A0K0K1A3 114 aa7.07□□□□□ -1.28
PRPF38B-203ENST00000370025 ATOX1O00244 68 aa7.07□□□□□ -1.28
PRPF38B-203ENST00000370025 SLPIP03973 132 aa7.07□□□□□ -1.28
PRPF38B-203ENST00000370025 COX7A2LO14548 114 aa7.06□□□□□ -1.28
PRPF38B-203ENST00000370025 RPL36AP83881 106 aaKnown RBP7.06□□□□□ -1.28
PRPF38B-203ENST00000370025 KRTAP24-1Q3LI83 254 aa7.06□□□□□ -1.28
PRPF38B-203ENST00000370025 RPL36ALQ969Q0 106 aaKnown RBP7.06□□□□□ -1.28
PRPF38B-203ENST00000370025 C1orf43Q9BWL3 253 aa7.06□□□□□ -1.28
PRPF38B-203ENST00000370025 K7EQD1 137 aa7.06□□□□□ -1.28
PRPF38B-203ENST00000370025 APOC4P55056 127 aa7.06□□□□□ -1.28
PRPF38B-203ENST00000370025 TRAV23DV6A0A075B6W5 121 aa7.06□□□□□ -1.28
PRPF38B-203ENST00000370025 LINC00308Q8TCZ7 52 aa7.06□□□□□ -1.28
PRPF38B-203ENST00000370025 CRYGAP11844 174 aa7.05□□□□□ -1.28
PRPF38B-203ENST00000370025 LINC00158P58513 81 aa7.05□□□□□ -1.28
PRPF38B-203ENST00000370025 DEFB121Q5J5C9 76 aa7.05□□□□□ -1.28
PRPF38B-203ENST00000370025 TRGV4A0A0C4DH28 118 aa7.05□□□□□ -1.28
PRPF38B-203ENST00000370025 NCR3O14931 201 aa7.05□□□□□ -1.28
PRPF38B-203ENST00000370025 WIPF1O43516 503 aa7.05□□□□□ -1.28
PRPF38B-203ENST00000370025 RPL18AQ02543 176 aaKnown RBP7.05□□□□□ -1.28
PRPF38B-203ENST00000370025 SPANXDQ9BXN6 97 aa7.05□□□□□ -1.28
PRPF38B-203ENST00000370025 SPANXCQ9NY87 97 aa7.05□□□□□ -1.28
PRPF38B-203ENST00000370025 PYGO1Q9Y3Y4 419 aa7.05□□□□□ -1.28
PRPF38B-203ENST00000370025 SOSTDC1Q6X4U4 206 aa7.04□□□□□ -1.28
PRPF38B-203ENST00000370025 LINC00846Q9NV44 126 aa7.04□□□□□ -1.28
PRPF38B-203ENST00000370025 USP17L23D6RBM5 183 aa7.04□□□□□ -1.28
PRPF38B-203ENST00000370025 COX6A2Q02221 97 aa7.04□□□□□ -1.28
PRPF38B-203ENST00000370025 C5orf38Q86SI9 138 aa7.03□□□□□ -1.28
PRPF38B-203ENST00000370025 C20orf197Q8N268 126 aa7.03□□□□□ -1.28
PRPF38B-203ENST00000370025 CHCHD7Q9BUK0 85 aa7.03□□□□□ -1.28
PRPF38B-203ENST00000370025 TENM1Q9UKZ4 2725 aa7.03□□□□□ -1.28
PRPF38B-203ENST00000370025 MRPS36P82909 103 aaKnown RBP7.03□□□□□ -1.28
PRPF38B-203ENST00000370025 TRBV6-4A0A1B0GX49 114 aa7.03□□□□□ -1.28
PRPF38B-203ENST00000370025 DEFB4AO15263 64 aa7.03□□□□□ -1.28
PRPF38B-203ENST00000370025 MALP21145 153 aa7.03□□□□□ -1.28
PRPF38B-203ENST00000370025 X6R8D5 127 aa7.03□□□□□ -1.28
PRPF38B-203ENST00000370025 FHL2Q14192 279 aa7.02□□□□□ -1.29
PRPF38B-203ENST00000370025 A0A087WYN8 130 aa7.02□□□□□ -1.29
PRPF38B-203ENST00000370025 INAFM2P0DMQ5 153 aa7.02□□□□□ -1.29
PRPF38B-203ENST00000370025 DEFB135Q30KP9 77 aa7.02□□□□□ -1.29
PRPF38B-203ENST00000370025 SERP2Q8N6R1 65 aa7.02□□□□□ -1.29
PRPF38B-203ENST00000370025 PAX4O43316 350 aa7.01□□□□□ -1.29
PRPF38B-203ENST00000370025 FAM104AQ969W3 186 aa7.01□□□□□ -1.29
PRPF38B-203ENST00000370025 UBE2D4Q9Y2X8 147 aa7.01□□□□□ -1.29
PRPF38B-203ENST00000370025 BAHCC1Q9P281 2608 aa7.01□□□□□ -1.29
PRPF38B-203ENST00000370025 A0A0U1RQV1 116 aa7□□□□□ -1.29
PRPF38B-203ENST00000370025 LINC01561Q8N1V8 128 aa7□□□□□ -1.29
PRPF38B-203ENST00000370025 C22orf24Q9Y442 160 aa7□□□□□ -1.29
PRPF38B-203ENST00000370025 VWFP04275 2813 aa7□□□□□ -1.29
PRPF38B-203ENST00000370025 TMEM258P61165 79 aa7□□□□□ -1.29
PRPF38B-203ENST00000370025 LOC100131303A0A0U1RQF7 123 aa7□□□□□ -1.29
PRPF38B-203ENST00000370025 LECT2O14960 151 aa7□□□□□ -1.29
PRPF38B-203ENST00000370025 IGHV4-30-4P0DP06 118 aa7□□□□□ -1.29
PRPF38B-203ENST00000370025 Q5XG85 94 aa7□□□□□ -1.29
PRPF38B-203ENST00000370025 LINC00612Q8N6U2 182 aa7□□□□□ -1.29
PRPF38B-203ENST00000370025 IGLV10-54A0A075B6I4 117 aa6.99□□□□□ -1.29
PRPF38B-203ENST00000370025 CYSRT1A8MQ03 144 aa6.99□□□□□ -1.29
PRPF38B-203ENST00000370025 LYRM9A8MSI8 78 aa6.99□□□□□ -1.29
PRPF38B-203ENST00000370025 GHRHP01286 108 aa6.99□□□□□ -1.29
PRPF38B-203ENST00000370025 OXLD1Q5BKU9 147 aa6.99□□□□□ -1.29
PRPF38B-203ENST00000370025 TMEM243Q9BU79 118 aa6.99□□□□□ -1.29
PRPF38B-203ENST00000370025 LINC01600Q96MT4 127 aa6.99□□□□□ -1.29
PRPF38B-203ENST00000370025 CXCL5P42830 114 aa6.99□□□□□ -1.29
PRPF38B-203ENST00000370025 FAM19A1Q7Z5A9 133 aa6.99□□□□□ -1.29
PRPF38B-203ENST00000370025 CRPP02741 224 aa6.98□□□□□ -1.29
PRPF38B-203ENST00000370025 LINC00336Q6ZUF6 198 aa6.98□□□□□ -1.29
PRPF38B-203ENST00000370025 RPS28P62857 69 aaKnown RBP6.98□□□□□ -1.29
PRPF38B-203ENST00000370025 FAM222AQ5U5X8 452 aa6.98□□□□□ -1.29
PRPF38B-203ENST00000370025 MIFP14174 115 aa6.98□□□□□ -1.29
PRPF38B-203ENST00000370025 XCL1P47992 114 aa6.98□□□□□ -1.29
PRPF38B-203ENST00000370025 ENHOQ6UWT2 76 aa6.97□□□□□ -1.29
PRPF38B-203ENST00000370025 NTM-AS1Q6ZSK4 140 aa6.97□□□□□ -1.29
PRPF38B-203ENST00000370025 IGHV4-28A0A0C4DH34 117 aa6.97□□□□□ -1.29
PRPF38B-203ENST00000370025 SNURFQ9Y675 71 aa6.97□□□□□ -1.29
PRPF38B-203ENST00000370025 NDUFA1O15239 70 aa6.97□□□□□ -1.29
PRPF38B-203ENST00000370025 NBEAL1Q6ZS30 2694 aa6.96□□□□□ -1.29
PRPF38B-203ENST00000370025 RPL28P46779 137 aaKnown RBP6.96□□□□□ -1.3
PRPF38B-203ENST00000370025 MIR7-3HGQ8N6C7 128 aa6.96□□□□□ -1.3
PRPF38B-203ENST00000370025 DAD1P61803 113 aa6.96□□□□□ -1.3
PRPF38B-203ENST00000370025 C6orf226Q5I0X4 101 aa6.96□□□□□ -1.3
PRPF38B-203ENST00000370025 LINC00337Q8N6G1 96 aa6.96□□□□□ -1.3
PRPF38B-203ENST00000370025 PRO0255Q9UI72 69 aa6.96□□□□□ -1.3
PRPF38B-203ENST00000370025 KRTAP10-11P60412 298 aa6.95□□□□□ -1.3
PRPF38B-203ENST00000370025 SMIM11BQ8TCY0 68 aa6.95□□□□□ -1.3
PRPF38B-203ENST00000370025 UPK3BQ9BT76 320 aa6.95□□□□□ -1.3
PRPF38B-203ENST00000370025 GYPEP15421 78 aa6.95□□□□□ -1.3
PRPF38B-203ENST00000370025 EGFEM1PQ0D2K5 195 aa6.95□□□□□ -1.3
PRPF38B-203ENST00000370025 Q8NAQ8 132 aa6.95□□□□□ -1.3
PRPF38B-203ENST00000370025 SND1-IT1Q9HBX3 110 aa6.95□□□□□ -1.3
PRPF38B-203ENST00000370025 SPART-AS1P0CW21 52 aa6.94□□□□□ -1.3
PRPF38B-203ENST00000370025 LINC00242Q5T6M2 205 aa6.94□□□□□ -1.3
PRPF38B-203ENST00000370025 TRBV6-8A0A0A6YYG3 113 aa6.94□□□□□ -1.3
PRPF38B-203ENST00000370025 BRK1Q8WUW1 75 aa6.93□□□□□ -1.3
PRPF38B-203ENST00000370025 CDC42SE2Q9NRR3 84 aa6.92□□□□□ -1.3
PRPF38B-203ENST00000370025 SMIM1B2RUZ4 78 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 192.7 ms