RNA–Protein interactions for RNA: ENST00000369487.3

CD58-201, Transcript of CD58 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD58, Length 892 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-201ENST00000369487 C6orf48Q9UBA6 75 aa13.13□□□□□ -0.31
CD58-201ENST00000369487 SERF1AO75920 110 aa13.12□□□□□ -0.31
CD58-201ENST00000369487 RPL18AQ02543 176 aaKnown RBP13.12□□□□□ -0.31
CD58-201ENST00000369487 STPG4Q8N801 248 aa13.12□□□□□ -0.31
CD58-201ENST00000369487 IFI27L1Q96BM0 104 aa13.12□□□□□ -0.31
CD58-201ENST00000369487 TLX1NBP0CAT3 122 aa13.11□□□□□ -0.31
CD58-201ENST00000369487 C2orf82Q6UX34 121 aa13.11□□□□□ -0.31
CD58-201ENST00000369487 FAM19A2Q8N3H0 131 aa13.11□□□□□ -0.31
CD58-201ENST00000369487 CXCL5P42830 114 aa13.1□□□□□ -0.31
CD58-201ENST00000369487 LINC00310P59036 64 aa13.1□□□□□ -0.31
CD58-201ENST00000369487 TRAV12-1A0A0B4J245 112 aa13.09□□□□□ -0.31
CD58-201ENST00000369487 SPINK8P0C7L1 97 aa13.08□□□□□ -0.32
CD58-201ENST00000369487 S100A1P23297 94 aa13.08□□□□□ -0.32
CD58-201ENST00000369487 COX7B2Q8TF08 81 aa13.08□□□□□ -0.32
CD58-201ENST00000369487 CHTOPQ9Y3Y2 248 aaKnown RBP13.08□□□□□ -0.32
CD58-201ENST00000369487 LEPROTL1O95214 131 aa13.07□□□□□ -0.32
CD58-201ENST00000369487 INAFM2P0DMQ5 153 aa13.07□□□□□ -0.32
CD58-201ENST00000369487 ZNF22P17026 224 aaPredicted RBP13.07□□□□□ -0.32
CD58-201ENST00000369487 F8VRH5 84 aa13.06□□□□□ -0.32
CD58-201ENST00000369487 RPL37AP61513 92 aaKnown RBP13.06□□□□□ -0.32
CD58-201ENST00000369487 SRRM2Q9UQ35 2752 aaKnown RBP13.05□□□□□ -0.32
CD58-201ENST00000369487 C11orf86A6NJI1 115 aa13.05□□□□□ -0.32
CD58-201ENST00000369487 HIST1H2BKO60814 126 aa13.05□□□□□ -0.32
CD58-201ENST00000369487 HIST1H2BJP06899 126 aa13.05□□□□□ -0.32
CD58-201ENST00000369487 HIST1H2BOP23527 126 aa13.05□□□□□ -0.32
CD58-201ENST00000369487 HIST1H2BBP33778 126 aa13.05□□□□□ -0.32
CD58-201ENST00000369487 HIST1H2BDP58876 126 aa13.05□□□□□ -0.32
CD58-201ENST00000369487 HIST1H2BCP62807 126 aa13.05□□□□□ -0.32
CD58-201ENST00000369487 HIST2H2BEQ16778 126 aa13.05□□□□□ -0.32
CD58-201ENST00000369487 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.05□□□□□ -0.32
CD58-201ENST00000369487 Q6ZRP5 223 aa13.05□□□□□ -0.32
CD58-201ENST00000369487 C7orf33Q8WU49 177 aa13.05□□□□□ -0.32
CD58-201ENST00000369487 HIST1H2BHQ93079 126 aa13.05□□□□□ -0.32
CD58-201ENST00000369487 HIST1H2BNQ99877 126 aa13.05□□□□□ -0.32
CD58-201ENST00000369487 HIST1H2BMQ99879 126 aa13.05□□□□□ -0.32
CD58-201ENST00000369487 NDUFC2-KCTD14E9PQ53 114 aa13.04□□□□□ -0.32
CD58-201ENST00000369487 TMEM170BQ5T4T1 132 aa13.04□□□□□ -0.32
CD58-201ENST00000369487 HSPB8Q9UJY1 196 aa13.04□□□□□ -0.32
CD58-201ENST00000369487 IGLV5-39A0A0G2JS06 123 aa13.03□□□□□ -0.32
CD58-201ENST00000369487 NUPR1O60356 82 aa13.03□□□□□ -0.32
CD58-201ENST00000369487 C9orf116Q5BN46 136 aaPredicted RBP13.02□□□□□ -0.33
CD58-201ENST00000369487 ATP6V1G1O75348 118 aa13.01□□□□□ -0.33
CD58-201ENST00000369487 KRTAP10-4P60372 401 aaPredicted RBP13.01□□□□□ -0.33
CD58-201ENST00000369487 GAGE2EQ4V326 116 aa13.01□□□□□ -0.33
CD58-201ENST00000369487 GAGE2DQ9UEU5 116 aa13.01□□□□□ -0.33
CD58-201ENST00000369487 A0A1W2PNN7 141 aa12.99□□□□□ -0.33
CD58-201ENST00000369487 FABP4P15090 132 aa12.99□□□□□ -0.33
CD58-201ENST00000369487 H0Y8G0 127 aa12.98□□□□□ -0.33
CD58-201ENST00000369487 ODF1Q14990 250 aa12.98□□□□□ -0.33
CD58-201ENST00000369487 SFTA2Q6UW10 78 aa12.96□□□□□ -0.33
CD58-201ENST00000369487 TMEM223A0PJW6 202 aa12.95□□□□□ -0.34
CD58-201ENST00000369487 MAP1LC3CQ9BXW4 147 aa12.95□□□□□ -0.34
CD58-201ENST00000369487 PLNP26678 52 aa12.93□□□□□ -0.34
CD58-201ENST00000369487 C9orf129Q5T035 196 aaKnown RBP12.93□□□□□ -0.34
CD58-201ENST00000369487 FAM168BA1KXE4 195 aa12.92□□□□□ -0.34
CD58-201ENST00000369487 COA6Q5JTJ3 125 aaKnown RBP12.92□□□□□ -0.34
CD58-201ENST00000369487 FAM19A5Q7Z5A7 132 aaPredicted RBP12.92□□□□□ -0.34
CD58-201ENST00000369487 PRR3P79522 188 aaKnown RBP12.91□□□□□ -0.34
CD58-201ENST00000369487 FLG2Q5D862 2391 aaPredicted RBP12.9□□□□□ -0.34
CD58-201ENST00000369487 DPM2O94777 84 aa12.89□□□□□ -0.35
CD58-201ENST00000369487 PHF5AQ7RTV0 110 aaKnown RBP12.89□□□□□ -0.35
CD58-201ENST00000369487 XAGE1AQ9HD64 81 aa12.89□□□□□ -0.35
CD58-201ENST00000369487 PKHD1L1Q86WI1 4243 aa12.88□□□□□ -0.35
CD58-201ENST00000369487 COX17Q14061 63 aa12.88□□□□□ -0.35
CD58-201ENST00000369487 ERG28Q9UKR5 140 aa12.88□□□□□ -0.35
CD58-201ENST00000369487 M0QXV9 152 aa12.87□□□□□ -0.35
CD58-201ENST00000369487 IGKCP01834 107 aa12.87□□□□□ -0.35
CD58-201ENST00000369487 ZNF625Q96I27 306 aaPredicted RBP12.87□□□□□ -0.35
CD58-201ENST00000369487 MYCBP2O75592 4640 aa12.87□□□□□ -0.35
CD58-201ENST00000369487 PFN2P35080 140 aa12.86□□□□□ -0.35
CD58-201ENST00000369487 HNRNPA3P51991 378 aaKnown RBP12.86□□□□□ -0.35
CD58-201ENST00000369487 KRTAP7-1Q8IUC3 87 aa12.86□□□□□ -0.35
CD58-201ENST00000369487 SYS1-DBNDD2H3BUS1 97 aa12.85□□□□□ -0.35
CD58-201ENST00000369487 HERVK_113P61574 105 aa12.85□□□□□ -0.35
CD58-201ENST00000369487 PMCHL2Q9BQD1 86 aa12.85□□□□□ -0.35
CD58-201ENST00000369487 SERTAD4-AS1Q5TG53 156 aa12.83□□□□□ -0.36
CD58-201ENST00000369487 UBE2BP63146 152 aa12.82□□□□□ -0.36
CD58-201ENST00000369487 PET117Q6UWS5 81 aa12.82□□□□□ -0.36
CD58-201ENST00000369487 PLEKHB2Q96CS7 222 aa12.82□□□□□ -0.36
CD58-201ENST00000369487 PSORS1C2Q9UIG4 136 aa12.82□□□□□ -0.36
CD58-201ENST00000369487 PLA2G2DQ9UNK4 145 aa12.82□□□□□ -0.36
CD58-201ENST00000369487 LEPROTO15243 131 aa12.81□□□□□ -0.36
CD58-201ENST00000369487 HERV-K104P63124 156 aa12.81□□□□□ -0.36
CD58-201ENST00000369487 LBHQ53QV2 105 aaPredicted RBP12.81□□□□□ -0.36
CD58-201ENST00000369487 TP73-AS1Q9UF72 201 aa12.81□□□□□ -0.36
CD58-201ENST00000369487 C22orf24Q9Y442 160 aa12.81□□□□□ -0.36
CD58-201ENST00000369487 NDUFA12Q9UI09 145 aa12.8□□□□□ -0.36
CD58-201ENST00000369487 MYMXA0A1B0GTQ4 84 aa12.79□□□□□ -0.36
CD58-201ENST00000369487 LINC01545Q5VT33 79 aa12.79□□□□□ -0.36
CD58-201ENST00000369487 KRTAP29-1A8MX34 341 aaPredicted RBP12.78□□□□□ -0.36
CD58-201ENST00000369487 LINC00587B1AMM8 73 aa12.78□□□□□ -0.36
CD58-201ENST00000369487 C1orf137Q5JT78 98 aa12.78□□□□□ -0.36
CD58-201ENST00000369487 SND1-IT1Q9HBX3 110 aa12.78□□□□□ -0.36
CD58-201ENST00000369487 J3QQQ9 107 aa12.77□□□□□ -0.37
CD58-201ENST00000369487 OXTP01178 125 aa12.77□□□□□ -0.37
CD58-201ENST00000369487 C3orf79P0CE67 100 aa12.77□□□□□ -0.37
CD58-201ENST00000369487 LINC00158P58513 81 aa12.77□□□□□ -0.37
CD58-201ENST00000369487 MEIG1Q5JSS6 88 aa12.77□□□□□ -0.37
CD58-201ENST00000369487 MRPL55Q7Z7F7 128 aaKnown RBP12.77□□□□□ -0.37
CD58-201ENST00000369487 IGLV5-37A0A075B6J1 123 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms