RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 HIST1H4GQ99525 98 aa6.73□□□□□ -1.33
TPM3-210ENST00000368530 LINC00959A0A1B0GUT2 108 aa6.72□□□□□ -1.33
TPM3-210ENST00000368530 A0A1B0GUV1 79 aa6.72□□□□□ -1.33
TPM3-210ENST00000368530 ANGP03950 147 aaKnown RBP6.72□□□□□ -1.33
TPM3-210ENST00000368530 CCL18P55774 89 aa6.72□□□□□ -1.33
TPM3-210ENST00000368530 Q6ZVH6 145 aa6.72□□□□□ -1.33
TPM3-210ENST00000368530 LINC00269Q8N2A0 174 aa6.72□□□□□ -1.33
TPM3-210ENST00000368530 Q9H8V8 135 aa6.72□□□□□ -1.33
TPM3-210ENST00000368530 SMIM1B2RUZ4 78 aa6.71□□□□□ -1.33
TPM3-210ENST00000368530 H3BNG1 76 aa6.71□□□□□ -1.33
TPM3-210ENST00000368530 H3BS24 57 aa6.71□□□□□ -1.33
TPM3-210ENST00000368530 K7EP13 123 aa6.71□□□□□ -1.33
TPM3-210ENST00000368530 NDUFA12Q9UI09 145 aa6.71□□□□□ -1.33
TPM3-210ENST00000368530 IGHV3-30P01768 117 aa6.71□□□□□ -1.34
TPM3-210ENST00000368530 IGHV3-33P01772 117 aa6.71□□□□□ -1.34
TPM3-210ENST00000368530 IGHV3-30-5P0DP03 117 aa6.71□□□□□ -1.34
TPM3-210ENST00000368530 XCL1P47992 114 aa6.71□□□□□ -1.34
TPM3-210ENST00000368530 PTTG1IPP53801 180 aa6.71□□□□□ -1.34
TPM3-210ENST00000368530 FXYD2P54710 66 aa6.71□□□□□ -1.34
TPM3-210ENST00000368530 SS18Q15532 418 aa6.71□□□□□ -1.34
TPM3-210ENST00000368530 CEND1Q8N111 149 aa6.71□□□□□ -1.34
TPM3-210ENST00000368530 CCL25O15444 150 aa6.7□□□□□ -1.34
TPM3-210ENST00000368530 SRSF9Q13242 221 aaKnown RBP eCLIP6.7□□□□□ -1.34
TPM3-210ENST00000368530 ESRGQ1W209 222 aa6.7□□□□□ -1.34
TPM3-210ENST00000368530 C5orf38Q86SI9 138 aa6.7□□□□□ -1.34
TPM3-210ENST00000368530 C10orf126Q8N4M7 172 aa6.7□□□□□ -1.34
TPM3-210ENST00000368530 FAT1Q14517 4588 aa6.69□□□□□ -1.34
TPM3-210ENST00000368530 IGLV10-54A0A075B6I4 117 aa6.69□□□□□ -1.34
TPM3-210ENST00000368530 IGLV5-39A0A0G2JS06 123 aa6.69□□□□□ -1.34
TPM3-210ENST00000368530 A0A0J9YXY3 114 aa6.69□□□□□ -1.34
TPM3-210ENST00000368530 REG3AQ06141 175 aa6.69□□□□□ -1.34
TPM3-210ENST00000368530 TAL2Q16559 108 aa6.69□□□□□ -1.34
TPM3-210ENST00000368530 C21orf62-AS1Q17RA5 79 aa6.69□□□□□ -1.34
TPM3-210ENST00000368530 WFDC10BQ8IUB3 73 aa6.69□□□□□ -1.34
TPM3-210ENST00000368530 UPK3BQ9BT76 320 aa6.69□□□□□ -1.34
TPM3-210ENST00000368530 IGHV3OR16-9A0A0B4J2B5 98 aa6.68□□□□□ -1.34
TPM3-210ENST00000368530 A6NDN8 102 aa6.68□□□□□ -1.34
TPM3-210ENST00000368530 K7ERJ3 54 aa6.68□□□□□ -1.34
TPM3-210ENST00000368530 TAX1BP3O14907 124 aa6.68□□□□□ -1.34
TPM3-210ENST00000368530 Q6ZRN7 208 aaPredicted RBP6.68□□□□□ -1.34
TPM3-210ENST00000368530 NHP2Q9NX24 153 aaKnown RBP6.68□□□□□ -1.34
TPM3-210ENST00000368530 TOMM7Q9P0U1 55 aa6.68□□□□□ -1.34
TPM3-210ENST00000368530 KLK12Q9UKR0 248 aa6.68□□□□□ -1.34
TPM3-210ENST00000368530 CHCHD10Q8WYQ3 142 aaPredicted RBP6.67□□□□□ -1.34
TPM3-210ENST00000368530 RAB37Q96AX2 223 aa6.67□□□□□ -1.34
TPM3-210ENST00000368530 ZNF625Q96I27 306 aaPredicted RBP6.67□□□□□ -1.34
TPM3-210ENST00000368530 TM2D2Q9BX73 214 aa6.67□□□□□ -1.34
TPM3-210ENST00000368530 NDUFA1O15239 70 aa6.66□□□□□ -1.34
TPM3-210ENST00000368530 COX7B2Q8TF08 81 aa6.66□□□□□ -1.34
TPM3-210ENST00000368530 SPANXB1Q9NS25 103 aaPredicted RBP6.66□□□□□ -1.34
TPM3-210ENST00000368530 A0A087WZ39 114 aa6.66□□□□□ -1.34
TPM3-210ENST00000368530 TMEM238C9JI98 176 aa6.66□□□□□ -1.34
TPM3-210ENST00000368530 SMIM13P0DJ93 91 aa6.66□□□□□ -1.34
TPM3-210ENST00000368530 XGP55808 180 aa6.66□□□□□ -1.34
TPM3-210ENST00000368530 TTC32Q5I0X7 151 aa6.66□□□□□ -1.34
TPM3-210ENST00000368530 UBE2WQ96B02 151 aa6.66□□□□□ -1.34
TPM3-210ENST00000368530 NAA38Q9BRA0 125 aaKnown RBP6.66□□□□□ -1.34
TPM3-210ENST00000368530 A0A0U1RRA0 63 aa6.65□□□□□ -1.35
TPM3-210ENST00000368530 NPC2P61916 151 aa6.65□□□□□ -1.35
TPM3-210ENST00000368530 ADAMTSL4-AS1Q5T5F5 129 aa6.65□□□□□ -1.35
TPM3-210ENST00000368530 COX11Q9Y6N1 276 aa6.65□□□□□ -1.35
TPM3-210ENST00000368530 GAGE12HA6NDE8 117 aa6.64□□□□□ -1.35
TPM3-210ENST00000368530 COX7A2LO14548 114 aa6.64□□□□□ -1.35
TPM3-210ENST00000368530 CRPP02741 224 aa6.64□□□□□ -1.35
TPM3-210ENST00000368530 MEIG1Q5JSS6 88 aa6.64□□□□□ -1.35
TPM3-210ENST00000368530 CD164L2Q6UWJ8 174 aa6.64□□□□□ -1.35
TPM3-210ENST00000368530 ENHOQ6UWT2 76 aa6.64□□□□□ -1.35
TPM3-210ENST00000368530 MUSTN1Q8IVN3 82 aa6.64□□□□□ -1.35
TPM3-210ENST00000368530 DAND5Q8N907 189 aa6.64□□□□□ -1.35
TPM3-210ENST00000368530 LITAFQ99732 161 aa6.64□□□□□ -1.35
TPM3-210ENST00000368530 DMBT1Q9UGM3 2413 aaPredicted RBP6.63□□□□□ -1.35
TPM3-210ENST00000368530 EPM2AB3EWF7 344 aa6.63□□□□□ -1.35
TPM3-210ENST00000368530 PRSS2P07478 247 aa6.63□□□□□ -1.35
TPM3-210ENST00000368530 FUSP35637 526 aaKnown RBP eCLIP6.63□□□□□ -1.35
TPM3-210ENST00000368530 H3BUT2 72 aa6.62□□□□□ -1.35
TPM3-210ENST00000368530 APOMO95445 188 aa6.62□□□□□ -1.35
TPM3-210ENST00000368530 MALP21145 153 aa6.62□□□□□ -1.35
TPM3-210ENST00000368530 FOXI1Q12951 378 aa6.62□□□□□ -1.35
TPM3-210ENST00000368530 PRR34Q9NV39 138 aa6.62□□□□□ -1.35
TPM3-210ENST00000368530 MYCBP2O75592 4640 aa6.62□□□□□ -1.35
TPM3-210ENST00000368530 C9orf118A6NHY6 69 aa6.61□□□□□ -1.35
TPM3-210ENST00000368530 CIRBPQ14011 172 aaKnown RBP6.61□□□□□ -1.35
TPM3-210ENST00000368530 VAMP3Q15836 100 aa6.61□□□□□ -1.35
TPM3-210ENST00000368530 MIAQ16674 131 aa6.61□□□□□ -1.35
TPM3-210ENST00000368530 SPANXDQ9BXN6 97 aa6.61□□□□□ -1.35
TPM3-210ENST00000368530 SPANXCQ9NY87 97 aa6.61□□□□□ -1.35
TPM3-210ENST00000368530 VPS13BQ7Z7G8 4022 aa6.61□□□□□ -1.35
TPM3-210ENST00000368530 A4D1N5 150 aa6.6□□□□□ -1.35
TPM3-210ENST00000368530 TIMM17BO60830 172 aa6.6□□□□□ -1.35
TPM3-210ENST00000368530 INAFM2P0DMQ5 153 aa6.6□□□□□ -1.35
TPM3-210ENST00000368530 HERV-K104P63124 156 aa6.6□□□□□ -1.35
TPM3-210ENST00000368530 C6orf226Q5I0X4 101 aa6.6□□□□□ -1.35
TPM3-210ENST00000368530 LINC01556Q5JQF7 62 aa6.6□□□□□ -1.35
TPM3-210ENST00000368530 SRRM2Q9UQ35 2752 aaKnown RBP6.6□□□□□ -1.35
TPM3-210ENST00000368530 A0A1B0GWB2 263 aa6.6□□□□□ -1.35
TPM3-210ENST00000368530 KRTAP10-1P60331 282 aa6.6□□□□□ -1.35
TPM3-210ENST00000368530 RPL24P83731 157 aaKnown RBP6.6□□□□□ -1.35
TPM3-210ENST00000368530 CFAP161Q6P656 301 aa6.6□□□□□ -1.35
TPM3-210ENST00000368530 C2orf82Q6UX34 121 aa6.6□□□□□ -1.35
TPM3-210ENST00000368530 LINC01561Q8N1V8 128 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms