RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 GAGE2EQ4V326 116 aa9.2□□□□□ -0.94
SF3B5-201ENST00000367569 MRPL35Q9NZE8 188 aaKnown RBP9.2□□□□□ -0.94
SF3B5-201ENST00000367569 GAGE2DQ9UEU5 116 aa9.2□□□□□ -0.94
SF3B5-201ENST00000367569 A0A1W2PNN7 141 aa9.19□□□□□ -0.94
SF3B5-201ENST00000367569 FAM168BA1KXE4 195 aa9.19□□□□□ -0.94
SF3B5-201ENST00000367569 SMIM1B2RUZ4 78 aa9.19□□□□□ -0.94
SF3B5-201ENST00000367569 PDZD11Q5EBL8 140 aa9.19□□□□□ -0.94
SF3B5-201ENST00000367569 Q6ZRP5 223 aa9.19□□□□□ -0.94
SF3B5-201ENST00000367569 PKIGQ9Y2B9 76 aa9.19□□□□□ -0.94
SF3B5-201ENST00000367569 TINCRA0A1B0GVN0 87 aa9.18□□□□□ -0.94
SF3B5-201ENST00000367569 RAB5BP61020 215 aa9.18□□□□□ -0.94
SF3B5-201ENST00000367569 LINC01549A6NIU2 74 aa9.17□□□□□ -0.94
SF3B5-201ENST00000367569 SEC11AP67812 179 aa9.17□□□□□ -0.94
SF3B5-201ENST00000367569 FAM19A5Q7Z5A7 132 aaPredicted RBP9.17□□□□□ -0.94
SF3B5-201ENST00000367569 BAGE3Q86Y29 109 aa9.17□□□□□ -0.94
SF3B5-201ENST00000367569 LINC01561Q8N1V8 128 aa9.17□□□□□ -0.94
SF3B5-201ENST00000367569 FAM19A2Q8N3H0 131 aa9.17□□□□□ -0.94
SF3B5-201ENST00000367569 C7orf33Q8WU49 177 aa9.17□□□□□ -0.94
SF3B5-201ENST00000367569 LINC00474Q9P2X8 69 aa9.17□□□□□ -0.94
SF3B5-201ENST00000367569 COLCA2A8K830 154 aa9.16□□□□□ -0.94
SF3B5-201ENST00000367569 CKS1BP61024 79 aa9.16□□□□□ -0.94
SF3B5-201ENST00000367569 RNF151Q2KHN1 245 aa9.16□□□□□ -0.94
SF3B5-201ENST00000367569 C6orf226Q5I0X4 101 aa9.16□□□□□ -0.94
SF3B5-201ENST00000367569 Q8IZM0 81 aa9.16□□□□□ -0.94
SF3B5-201ENST00000367569 IGLV5-45A0A087WSX0 123 aa9.15□□□□□ -0.94
SF3B5-201ENST00000367569 LINC00310P59036 64 aa9.15□□□□□ -0.94
SF3B5-201ENST00000367569 PRR3P79522 188 aaKnown RBP9.15□□□□□ -0.94
SF3B5-201ENST00000367569 PHF5AQ7RTV0 110 aaKnown RBP9.15□□□□□ -0.94
SF3B5-201ENST00000367569 COX7B2Q8TF08 81 aa9.15□□□□□ -0.94
SF3B5-201ENST00000367569 TRBV30A0A0K0K1B3 111 aa9.14□□□□□ -0.95
SF3B5-201ENST00000367569 C11orf86A6NJI1 115 aa9.14□□□□□ -0.95
SF3B5-201ENST00000367569 F8WDY8 70 aa9.14□□□□□ -0.95
SF3B5-201ENST00000367569 H0Y8G0 127 aa9.14□□□□□ -0.95
SF3B5-201ENST00000367569 HSBP1O75506 76 aa9.14□□□□□ -0.95
SF3B5-201ENST00000367569 SERF1AO75920 110 aa9.14□□□□□ -0.95
SF3B5-201ENST00000367569 IGLC3P0DOY3 106 aa9.14□□□□□ -0.95
SF3B5-201ENST00000367569 ZNF22P17026 224 aaPredicted RBP9.14□□□□□ -0.95
SF3B5-201ENST00000367569 CHCHD1Q96BP2 118 aaKnown RBP9.14□□□□□ -0.95
SF3B5-201ENST00000367569 ATP5LO75964 103 aa9.13□□□□□ -0.95
SF3B5-201ENST00000367569 C9orf129Q5T035 196 aaKnown RBP9.12□□□□□ -0.95
SF3B5-201ENST00000367569 XAGE1AQ9HD64 81 aa9.12□□□□□ -0.95
SF3B5-201ENST00000367569 PLA2G2DQ9UNK4 145 aa9.12□□□□□ -0.95
SF3B5-201ENST00000367569 TNXBP22105 4242 aa9.11□□□□□ -0.95
SF3B5-201ENST00000367569 NDUFC2-KCTD14E9PQ53 114 aa9.11□□□□□ -0.95
SF3B5-201ENST00000367569 F8VRH5 84 aa9.11□□□□□ -0.95
SF3B5-201ENST00000367569 H3BRM9 83 aa9.11□□□□□ -0.95
SF3B5-201ENST00000367569 NUPR1O60356 82 aa9.11□□□□□ -0.95
SF3B5-201ENST00000367569 TLX1NBP0CAT3 122 aa9.11□□□□□ -0.95
SF3B5-201ENST00000367569 KRTAP7-1Q8IUC3 87 aa9.11□□□□□ -0.95
SF3B5-201ENST00000367569 IFI27L1Q96BM0 104 aa9.11□□□□□ -0.95
SF3B5-201ENST00000367569 CHTOPQ9Y3Y2 248 aaKnown RBP9.11□□□□□ -0.95
SF3B5-201ENST00000367569 MT1HL1P0DM35 61 aa9.1□□□□□ -0.95
SF3B5-201ENST00000367569 TMEM170BQ5T4T1 132 aa9.1□□□□□ -0.95
SF3B5-201ENST00000367569 KRTAP11-1Q8IUC1 163 aa9.09□□□□□ -0.95
SF3B5-201ENST00000367569 M0QXV9 152 aa9.08□□□□□ -0.96
SF3B5-201ENST00000367569 CXCL5P42830 114 aa9.08□□□□□ -0.96
SF3B5-201ENST00000367569 IGLV5-39A0A0G2JS06 123 aa9.07□□□□□ -0.96
SF3B5-201ENST00000367569 FABP4P15090 132 aa9.07□□□□□ -0.96
SF3B5-201ENST00000367569 ZNF625Q96I27 306 aaPredicted RBP9.06□□□□□ -0.96
SF3B5-201ENST00000367569 PSORS1C2Q9UIG4 136 aa9.06□□□□□ -0.96
SF3B5-201ENST00000367569 LEPROTL1O95214 131 aa9.05□□□□□ -0.96
SF3B5-201ENST00000367569 PFN2P35080 140 aa9.05□□□□□ -0.96
SF3B5-201ENST00000367569 PMCHL2Q9BQD1 86 aa9.05□□□□□ -0.96
SF3B5-201ENST00000367569 TRAV12-1A0A0B4J245 112 aa9.04□□□□□ -0.96
SF3B5-201ENST00000367569 HIST1H2BKO60814 126 aa9.04□□□□□ -0.96
SF3B5-201ENST00000367569 HIST1H2BJP06899 126 aa9.04□□□□□ -0.96
SF3B5-201ENST00000367569 HIST1H2BOP23527 126 aa9.04□□□□□ -0.96
SF3B5-201ENST00000367569 HIST1H2BBP33778 126 aa9.04□□□□□ -0.96
SF3B5-201ENST00000367569 HIST1H2BDP58876 126 aa9.04□□□□□ -0.96
SF3B5-201ENST00000367569 HIST1H2BCP62807 126 aa9.04□□□□□ -0.96
SF3B5-201ENST00000367569 UBE2BP63146 152 aa9.04□□□□□ -0.96
SF3B5-201ENST00000367569 HIST2H2BEQ16778 126 aa9.04□□□□□ -0.96
SF3B5-201ENST00000367569 C1orf137Q5JT78 98 aa9.04□□□□□ -0.96
SF3B5-201ENST00000367569 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.04□□□□□ -0.96
SF3B5-201ENST00000367569 HIST1H2BHQ93079 126 aa9.04□□□□□ -0.96
SF3B5-201ENST00000367569 HIST1H2BNQ99877 126 aa9.04□□□□□ -0.96
SF3B5-201ENST00000367569 HIST1H2BMQ99879 126 aa9.04□□□□□ -0.96
SF3B5-201ENST00000367569 ODF1Q14990 250 aa9.03□□□□□ -0.96
SF3B5-201ENST00000367569 TMEM223A0PJW6 202 aa9.02□□□□□ -0.97
SF3B5-201ENST00000367569 A0A0U1RRA0 63 aa9□□□□□ -0.97
SF3B5-201ENST00000367569 ERG28Q9UKR5 140 aa9□□□□□ -0.97
SF3B5-201ENST00000367569 LRP2P98164 4655 aa9□□□□□ -0.97
SF3B5-201ENST00000367569 GAGE10A6NGK3 116 aa8.99□□□□□ -0.97
SF3B5-201ENST00000367569 HSPB8Q9UJY1 196 aa8.99□□□□□ -0.97
SF3B5-201ENST00000367569 C22orf24Q9Y442 160 aa8.99□□□□□ -0.97
SF3B5-201ENST00000367569 TSPEAR-AS2P59090 65 aa8.98□□□□□ -0.97
SF3B5-201ENST00000367569 ATP6V1G1O75348 118 aa8.97□□□□□ -0.97
SF3B5-201ENST00000367569 RPL37AP8A6NKH3 93 aa8.96□□□□□ -0.98
SF3B5-201ENST00000367569 SND1-IT1Q9HBX3 110 aa8.96□□□□□ -0.98
SF3B5-201ENST00000367569 IGLV7-43P04211 117 aa8.95□□□□□ -0.98
SF3B5-201ENST00000367569 SRSF9Q13242 221 aaKnown RBP eCLIP8.95□□□□□ -0.98
SF3B5-201ENST00000367569 SPINK6Q6UWN8 80 aa8.95□□□□□ -0.98
SF3B5-201ENST00000367569 MRPL55Q7Z7F7 128 aaKnown RBP8.95□□□□□ -0.98
SF3B5-201ENST00000367569 Q8NDZ9 215 aa8.95□□□□□ -0.98
SF3B5-201ENST00000367569 DPM2O94777 84 aa8.94□□□□□ -0.98
SF3B5-201ENST00000367569 LINC01600Q96MT4 127 aa8.94□□□□□ -0.98
SF3B5-201ENST00000367569 MAP1LC3CQ9BXW4 147 aa8.94□□□□□ -0.98
SF3B5-201ENST00000367569 IGKCP01834 107 aa8.93□□□□□ -0.98
SF3B5-201ENST00000367569 SMIM13P0DJ93 91 aa8.93□□□□□ -0.98
SF3B5-201ENST00000367569 PLNP26678 52 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms