RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 M0QXV9 152 aa13.78□□□□□ -0.2
CHD1L-201ENST00000361293 PFN2P35080 140 aa13.78□□□□□ -0.2
CHD1L-201ENST00000361293 SHISA2Q6UWI4 295 aa13.77□□□□□ -0.21
CHD1L-201ENST00000361293 RETNQ9HD89 108 aa13.77□□□□□ -0.21
CHD1L-201ENST00000361293 ANGP03950 147 aaKnown RBP13.76□□□□□ -0.21
CHD1L-201ENST00000361293 C6orf226Q5I0X4 101 aa13.76□□□□□ -0.21
CHD1L-201ENST00000361293 C2orf82Q6UX34 121 aa13.76□□□□□ -0.21
CHD1L-201ENST00000361293 NTN5Q8WTR8 489 aaPredicted RBP13.76□□□□□ -0.21
CHD1L-201ENST00000361293 IGKV2-28A0A075B6P5 120 aa13.75□□□□□ -0.21
CHD1L-201ENST00000361293 IGKV2D-28P01615 120 aa13.75□□□□□ -0.21
CHD1L-201ENST00000361293 IBA57-AS1B1ANH7 110 aa13.75□□□□□ -0.21
CHD1L-201ENST00000361293 LINC00337Q8N6G1 96 aa13.75□□□□□ -0.21
CHD1L-201ENST00000361293 PPDPFQ9H3Y8 114 aa13.75□□□□□ -0.21
CHD1L-201ENST00000361293 SND1-IT1Q9HBX3 110 aa13.75□□□□□ -0.21
CHD1L-201ENST00000361293 CCL18P55774 89 aa13.74□□□□□ -0.21
CHD1L-201ENST00000361293 REG3AQ06141 175 aa13.74□□□□□ -0.21
CHD1L-201ENST00000361293 CDIP1Q9H305 208 aa13.74□□□□□ -0.21
CHD1L-201ENST00000361293 MRPL23Q16540 153 aaKnown RBP13.74□□□□□ -0.21
CHD1L-201ENST00000361293 CHCHD10Q8WYQ3 142 aaPredicted RBP13.73□□□□□ -0.21
CHD1L-201ENST00000361293 ANK2Q01484 3957 aa13.73□□□□□ -0.21
CHD1L-201ENST00000361293 TEX49A0A1B0GTD5 131 aa13.73□□□□□ -0.21
CHD1L-201ENST00000361293 LINC01600Q96MT4 127 aa13.73□□□□□ -0.21
CHD1L-201ENST00000361293 SIGMAR1Q99720 223 aa13.73□□□□□ -0.21
CHD1L-201ENST00000361293 Q8IZM0 81 aa13.72□□□□□ -0.21
CHD1L-201ENST00000361293 COX7A2LO14548 114 aa13.72□□□□□ -0.21
CHD1L-201ENST00000361293 CD164L2Q6UWJ8 174 aa13.71□□□□□ -0.21
CHD1L-201ENST00000361293 CRPP02741 224 aa13.7□□□□□ -0.22
CHD1L-201ENST00000361293 KIAA0087Q14695 138 aa13.69□□□□□ -0.22
CHD1L-201ENST00000361293 LELP1Q5T871 98 aa13.69□□□□□ -0.22
CHD1L-201ENST00000361293 FAM218AQ96MZ4 157 aa13.68□□□□□ -0.22
CHD1L-201ENST00000361293 TENM3Q9P273 2699 aa13.68□□□□□ -0.22
CHD1L-201ENST00000361293 TRAV13-2A0A0B4J235 113 aa13.68□□□□□ -0.22
CHD1L-201ENST00000361293 H3BT86 120 aa13.68□□□□□ -0.22
CHD1L-201ENST00000361293 MAST4O15021 2626 aa13.68□□□□□ -0.22
CHD1L-201ENST00000361293 CMYA5Q8N3K9 4069 aa13.67□□□□□ -0.22
CHD1L-201ENST00000361293 LINC01561Q8N1V8 128 aa13.67□□□□□ -0.22
CHD1L-201ENST00000361293 C3orf56Q8N813 242 aa13.66□□□□□ -0.22
CHD1L-201ENST00000361293 UBE2WQ96B02 151 aa13.66□□□□□ -0.22
CHD1L-201ENST00000361293 CKS1BP61024 79 aa13.65□□□□□ -0.22
CHD1L-201ENST00000361293 EGFEM1PQ0D2K5 195 aa13.65□□□□□ -0.22
CHD1L-201ENST00000361293 MALP21145 153 aa13.64□□□□□ -0.23
CHD1L-201ENST00000361293 RPL28P46779 137 aaKnown RBP13.64□□□□□ -0.23
CHD1L-201ENST00000361293 KLK12Q9UKR0 248 aa13.64□□□□□ -0.23
CHD1L-201ENST00000361293 XGP55808 180 aa13.64□□□□□ -0.23
CHD1L-201ENST00000361293 LYPD5Q6UWN5 251 aa13.64□□□□□ -0.23
CHD1L-201ENST00000361293 C9orf116Q5BN46 136 aaPredicted RBP13.63□□□□□ -0.23
CHD1L-201ENST00000361293 SMIM11BQ8TCY0 68 aa13.63□□□□□ -0.23
CHD1L-201ENST00000361293 TRAV8-4A0A0B4J246 113 aa13.63□□□□□ -0.23
CHD1L-201ENST00000361293 Q6ZTC4 211 aa13.62□□□□□ -0.23
CHD1L-201ENST00000361293 MT-ATP8P03928 68 aa13.62□□□□□ -0.23
CHD1L-201ENST00000361293 CFAP161Q6P656 301 aa13.62□□□□□ -0.23
CHD1L-201ENST00000361293 ENHOQ6UWT2 76 aa13.61□□□□□ -0.23
CHD1L-201ENST00000361293 LINC00526Q96FQ7 95 aa13.61□□□□□ -0.23
CHD1L-201ENST00000361293 PRR34Q9NV39 138 aa13.61□□□□□ -0.23
CHD1L-201ENST00000361293 KPRPQ5T749 579 aaPredicted RBP13.59□□□□□ -0.23
CHD1L-201ENST00000361293 C6orf223Q8N319 242 aa13.59□□□□□ -0.23
CHD1L-201ENST00000361293 NOTCH1P46531 2555 aa13.59□□□□□ -0.23
CHD1L-201ENST00000361293 TRACP01848 142 aa13.58□□□□□ -0.23
CHD1L-201ENST00000361293 PRR3P79522 188 aaKnown RBP13.58□□□□□ -0.24
CHD1L-201ENST00000361293 C10orf25Q5T742 122 aa13.57□□□□□ -0.24
CHD1L-201ENST00000361293 WFDC10BQ8IUB3 73 aa13.57□□□□□ -0.24
CHD1L-201ENST00000361293 OR13C6PQ8NH95 151 aa13.57□□□□□ -0.24
CHD1L-201ENST00000361293 CXCL5P42830 114 aa13.57□□□□□ -0.24
CHD1L-201ENST00000361293 Q9HAA7 133 aa13.57□□□□□ -0.24
CHD1L-201ENST00000361293 A0A087WYN8 130 aa13.55□□□□□ -0.24
CHD1L-201ENST00000361293 C22orf24Q9Y442 160 aa13.55□□□□□ -0.24
CHD1L-201ENST00000361293 A0A0J9YWU9 116 aa13.55□□□□□ -0.24
CHD1L-201ENST00000361293 SPAG11BQ08648 103 aa13.55□□□□□ -0.24
CHD1L-201ENST00000361293 UNQ6190/PRO20217Q6UXQ8 127 aa13.55□□□□□ -0.24
CHD1L-201ENST00000361293 KLK5Q9Y337 293 aaPredicted RBP13.54□□□□□ -0.24
CHD1L-201ENST00000361293 COL6A5A8TX70 2615 aa13.54□□□□□ -0.24
CHD1L-201ENST00000361293 CYSRT1A8MQ03 144 aa13.54□□□□□ -0.24
CHD1L-201ENST00000361293 Q8NDZ9 215 aa13.54□□□□□ -0.24
CHD1L-201ENST00000361293 COX17Q14061 63 aa13.53□□□□□ -0.24
CHD1L-201ENST00000361293 BAALC-AS2P0C853 105 aa13.53□□□□□ -0.24
CHD1L-201ENST00000361293 SCGB1A1P11684 91 aa13.53□□□□□ -0.24
CHD1L-201ENST00000361293 NANOS2P60321 138 aaKnown RBP13.53□□□□□ -0.24
CHD1L-201ENST00000361293 DNAH3Q8TD57 4116 aa13.53□□□□□ -0.24
CHD1L-201ENST00000361293 H3BNG1 76 aa13.52□□□□□ -0.25
CHD1L-201ENST00000361293 DEFB121Q5J5C9 76 aa13.52□□□□□ -0.25
CHD1L-201ENST00000361293 BAHCC1Q9P281 2608 aa13.51□□□□□ -0.25
CHD1L-201ENST00000361293 PRB2P02812 416 aaPredicted RBP13.49□□□□□ -0.25
CHD1L-201ENST00000361293 ESRGQ1W209 222 aa13.49□□□□□ -0.25
CHD1L-201ENST00000361293 NBEAL1Q6ZS30 2694 aa13.47□□□□□ -0.25
CHD1L-201ENST00000361293 H0YGX0 51 aa13.47□□□□□ -0.25
CHD1L-201ENST00000361293 NDUFC2O95298 119 aa13.47□□□□□ -0.25
CHD1L-201ENST00000361293 DEFB131BA0A096LNP1 70 aa13.46□□□□□ -0.25
CHD1L-201ENST00000361293 NCR3O14931 201 aa13.46□□□□□ -0.25
CHD1L-201ENST00000361293 LECT2O14960 151 aa13.46□□□□□ -0.25
CHD1L-201ENST00000361293 C11orf45Q8TAV5 145 aa13.46□□□□□ -0.26
CHD1L-201ENST00000361293 DNAL4O96015 105 aa13.45□□□□□ -0.26
CHD1L-201ENST00000361293 KRTAP26-1Q6PEX3 210 aa13.44□□□□□ -0.26
CHD1L-201ENST00000361293 C9orf129Q5T035 196 aaKnown RBP13.43□□□□□ -0.26
CHD1L-201ENST00000361293 C6orf48Q9UBA6 75 aa13.43□□□□□ -0.26
CHD1L-201ENST00000361293 SLPIP03973 132 aa13.42□□□□□ -0.26
CHD1L-201ENST00000361293 HIGD2BQ4VC39 106 aa13.42□□□□□ -0.26
CHD1L-201ENST00000361293 C15orf53Q8NAA6 179 aa13.42□□□□□ -0.26
CHD1L-201ENST00000361293 FAM240AA0A1B0GVK7 77 aa13.41□□□□□ -0.26
CHD1L-201ENST00000361293 TMEM126AQ9H061 195 aa13.4□□□□□ -0.26
CHD1L-201ENST00000361293 TTC32Q5I0X7 151 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms