RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 OXLD1Q5BKU9 147 aa15.65■□□□□ 0.1
LDB1-201ENST00000361198 GAGE2DQ9UEU5 116 aa15.65■□□□□ 0.1
LDB1-201ENST00000361198 LINC00959A0A1B0GUT2 108 aa15.64■□□□□ 0.09
LDB1-201ENST00000361198 MRPL23Q16540 153 aaKnown RBP15.64■□□□□ 0.09
LDB1-201ENST00000361198 A0A1B0GUV1 79 aa15.63■□□□□ 0.09
LDB1-201ENST00000361198 TRACP01848 142 aa15.63■□□□□ 0.09
LDB1-201ENST00000361198 KRTAP24-1Q3LI83 254 aa15.63■□□□□ 0.09
LDB1-201ENST00000361198 C15orf53Q8NAA6 179 aa15.63■□□□□ 0.09
LDB1-201ENST00000361198 ATP5G1P05496 136 aa15.62■□□□□ 0.09
LDB1-201ENST00000361198 TOMM7Q9P0U1 55 aa15.62■□□□□ 0.09
LDB1-201ENST00000361198 STAB1Q9NY15 2570 aa15.62■□□□□ 0.09
LDB1-201ENST00000361198 TRAV26-1A0A087WT03 109 aa15.61■□□□□ 0.09
LDB1-201ENST00000361198 FBN1P35555 2871 aaKnown RBP15.61■□□□□ 0.09
LDB1-201ENST00000361198 C5orf38Q86SI9 138 aa15.61■□□□□ 0.09
LDB1-201ENST00000361198 A0A087WZ39 114 aa15.6■□□□□ 0.09
LDB1-201ENST00000361198 TRAV13-2A0A0B4J235 113 aa15.6■□□□□ 0.09
LDB1-201ENST00000361198 SPART-AS1P0CW21 52 aa15.6■□□□□ 0.09
LDB1-201ENST00000361198 ANAPC13Q9BS18 74 aa15.6■□□□□ 0.09
LDB1-201ENST00000361198 MIR7-3HGQ8N6C7 128 aa15.6■□□□□ 0.09
LDB1-201ENST00000361198 ANK2Q01484 3957 aa15.59■□□□□ 0.09
LDB1-201ENST00000361198 CLPSL2Q6UWE3 100 aa15.59■□□□□ 0.09
LDB1-201ENST00000361198 RPL28P46779 137 aaKnown RBP15.58■□□□□ 0.08
LDB1-201ENST00000361198 KRTAP10-11P60412 298 aa15.58■□□□□ 0.08
LDB1-201ENST00000361198 PKD1L1Q8TDX9 2849 aa15.58■□□□□ 0.08
LDB1-201ENST00000361198 CMYA5Q8N3K9 4069 aa15.57■□□□□ 0.08
LDB1-201ENST00000361198 HTN3P15516 51 aa15.57■□□□□ 0.08
LDB1-201ENST00000361198 IGKV2-28A0A075B6P5 120 aa15.56■□□□□ 0.08
LDB1-201ENST00000361198 IGKV2D-28P01615 120 aa15.56■□□□□ 0.08
LDB1-201ENST00000361198 NHLRC4P0CG21 123 aaPredicted RBP15.56■□□□□ 0.08
LDB1-201ENST00000361198 XCL1P47992 114 aa15.56■□□□□ 0.08
LDB1-201ENST00000361198 LINC00337Q8N6G1 96 aa15.56■□□□□ 0.08
LDB1-201ENST00000361198 FAM218AQ96MZ4 157 aa15.56■□□□□ 0.08
LDB1-201ENST00000361198 SND1-IT1Q9HBX3 110 aa15.56■□□□□ 0.08
LDB1-201ENST00000361198 NDUFV3P56181 108 aaKnown RBP15.55■□□□□ 0.08
LDB1-201ENST00000361198 IBA57-AS1B1ANH7 110 aa15.55■□□□□ 0.08
LDB1-201ENST00000361198 CRPP02741 224 aa15.55■□□□□ 0.08
LDB1-201ENST00000361198 SS18Q15532 418 aa15.55■□□□□ 0.08
LDB1-201ENST00000361198 Q8N3U1 123 aa15.55■□□□□ 0.08
LDB1-201ENST00000361198 ACYP1P07311 99 aa15.54■□□□□ 0.08
LDB1-201ENST00000361198 BAALC-AS2P0C853 105 aa15.53■□□□□ 0.08
LDB1-201ENST00000361198 C22orf24Q9Y442 160 aa15.53■□□□□ 0.08
LDB1-201ENST00000361198 LINC00158P58513 81 aa15.52■□□□□ 0.08
LDB1-201ENST00000361198 LINC00269Q8N2A0 174 aa15.52■□□□□ 0.08
LDB1-201ENST00000361198 TTC32Q5I0X7 151 aa15.52■□□□□ 0.07
LDB1-201ENST00000361198 C3orf56Q8N813 242 aa15.52■□□□□ 0.07
LDB1-201ENST00000361198 CCL18P55774 89 aa15.51■□□□□ 0.07
LDB1-201ENST00000361198 MAST4O15021 2626 aa15.51■□□□□ 0.07
LDB1-201ENST00000361198 RETNQ9HD89 108 aa15.5■□□□□ 0.07
LDB1-201ENST00000361198 ANGP03950 147 aaKnown RBP15.48■□□□□ 0.07
LDB1-201ENST00000361198 EGFEM1PQ0D2K5 195 aa15.48■□□□□ 0.07
LDB1-201ENST00000361198 TRBV7-7A0A0K0K1E9 115 aa15.47■□□□□ 0.07
LDB1-201ENST00000361198 C6orf226Q5I0X4 101 aa15.47■□□□□ 0.07
LDB1-201ENST00000361198 SMIM11BQ8TCY0 68 aa15.47■□□□□ 0.07
LDB1-201ENST00000361198 C11orf68Q9H3H3 251 aaKnown RBP15.47■□□□□ 0.07
LDB1-201ENST00000361198 REG3AQ06141 175 aa15.46■□□□□ 0.07
LDB1-201ENST00000361198 IGLV10-54A0A075B6I4 117 aa15.45■□□□□ 0.06
LDB1-201ENST00000361198 LELP1Q5T871 98 aa15.45■□□□□ 0.06
LDB1-201ENST00000361198 SDIM1Q6ZPB5 146 aa15.45■□□□□ 0.06
LDB1-201ENST00000361198 CD164L2Q6UWJ8 174 aa15.44■□□□□ 0.06
LDB1-201ENST00000361198 CHCHD10Q8WYQ3 142 aaPredicted RBP15.44■□□□□ 0.06
LDB1-201ENST00000361198 PFN2P35080 140 aa15.43■□□□□ 0.06
LDB1-201ENST00000361198 Q8IZM0 81 aa15.43■□□□□ 0.06
LDB1-201ENST00000361198 H0YGX0 51 aa15.43■□□□□ 0.06
LDB1-201ENST00000361198 LINC01561Q8N1V8 128 aa15.43■□□□□ 0.06
LDB1-201ENST00000361198 Q9HAA7 133 aa15.43■□□□□ 0.06
LDB1-201ENST00000361198 MALP21145 153 aa15.42■□□□□ 0.06
LDB1-201ENST00000361198 INAFM2P0DMQ5 153 aa15.41■□□□□ 0.06
LDB1-201ENST00000361198 IMUPQ9GZP8 106 aa15.41■□□□□ 0.06
LDB1-201ENST00000361198 TENM3Q9P273 2699 aa15.4■□□□□ 0.06
LDB1-201ENST00000361198 DNAH3Q8TD57 4116 aa15.4■□□□□ 0.06
LDB1-201ENST00000361198 SMCR5Q8TEV8 140 aa15.4■□□□□ 0.06
LDB1-201ENST00000361198 A0A087WYN8 130 aa15.39■□□□□ 0.05
LDB1-201ENST00000361198 COL6A5A8TX70 2615 aa15.39■□□□□ 0.05
LDB1-201ENST00000361198 LINC00643Q86TS7 51 aa15.38■□□□□ 0.05
LDB1-201ENST00000361198 LYPD5Q6UWN5 251 aa15.38■□□□□ 0.05
LDB1-201ENST00000361198 DNAL4O96015 105 aa15.37■□□□□ 0.05
LDB1-201ENST00000361198 KIAA0087Q14695 138 aa15.37■□□□□ 0.05
LDB1-201ENST00000361198 NOTCH1P46531 2555 aa15.37■□□□□ 0.05
LDB1-201ENST00000361198 Q6ZTC4 211 aa15.36■□□□□ 0.05
LDB1-201ENST00000361198 CYSRT1A8MQ03 144 aa15.35■□□□□ 0.05
LDB1-201ENST00000361198 KLK12Q9UKR0 248 aa15.35■□□□□ 0.05
LDB1-201ENST00000361198 BAHCC1Q9P281 2608 aa15.33■□□□□ 0.05
LDB1-201ENST00000361198 KPRPQ5T749 579 aaPredicted RBP15.33■□□□□ 0.05
LDB1-201ENST00000361198 OBSCN-AS1Q96MR7 158 aa15.33■□□□□ 0.05
LDB1-201ENST00000361198 CCDC179H3BU77 68 aa15.33■□□□□ 0.04
LDB1-201ENST00000361198 PRR34Q9NV39 138 aa15.33■□□□□ 0.04
LDB1-201ENST00000361198 B5MCH6 92 aa15.32■□□□□ 0.04
LDB1-201ENST00000361198 CFAP161Q6P656 301 aa15.32■□□□□ 0.04
LDB1-201ENST00000361198 OR13C6PQ8NH95 151 aa15.32■□□□□ 0.04
LDB1-201ENST00000361198 ENHOQ6UWT2 76 aa15.31■□□□□ 0.04
LDB1-201ENST00000361198 A0A0J9YWU9 116 aa15.3■□□□□ 0.04
LDB1-201ENST00000361198 H3BNG1 76 aa15.3■□□□□ 0.04
LDB1-201ENST00000361198 LECT2O14960 151 aa15.3■□□□□ 0.04
LDB1-201ENST00000361198 COX17Q14061 63 aa15.29■□□□□ 0.04
LDB1-201ENST00000361198 CXCL5P42830 114 aa15.29■□□□□ 0.04
LDB1-201ENST00000361198 C9orf129Q5T035 196 aaKnown RBP15.29■□□□□ 0.04
LDB1-201ENST00000361198 GAGE2AQ6NT46 116 aa15.29■□□□□ 0.04
LDB1-201ENST00000361198 NDUFC2O95298 119 aa15.27■□□□□ 0.04
LDB1-201ENST00000361198 C9orf116Q5BN46 136 aaPredicted RBP15.27■□□□□ 0.03
LDB1-201ENST00000361198 WFDC10BQ8IUB3 73 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms