RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 PTPRBP23467 1997 aa9.83□□□□□ -0.84
SMC5-201ENST00000361138 EGFEM1PQ0D2K5 195 aa9.83□□□□□ -0.84
SMC5-201ENST00000361138 C1orf137Q5JT78 98 aa9.82□□□□□ -0.84
SMC5-201ENST00000361138 C14orf177Q52M58 125 aa9.82□□□□□ -0.84
SMC5-201ENST00000361138 PRR15LQ9BU68 103 aa9.82□□□□□ -0.84
SMC5-201ENST00000361138 KPRPQ5T749 579 aaPredicted RBP9.81□□□□□ -0.84
SMC5-201ENST00000361138 DOPEY2Q9Y3R5 2298 aa9.81□□□□□ -0.84
SMC5-201ENST00000361138 PMAIP1Q13794 54 aa9.81□□□□□ -0.84
SMC5-201ENST00000361138 INAFM1C9JVW0 142 aa9.81□□□□□ -0.84
SMC5-201ENST00000361138 PSPHP1O15172 72 aa9.8□□□□□ -0.84
SMC5-201ENST00000361138 SEC61GP60059 68 aa9.8□□□□□ -0.84
SMC5-201ENST00000361138 ESRGQ1W209 222 aa9.79□□□□□ -0.84
SMC5-201ENST00000361138 CUL9Q8IWT3 2517 aa9.79□□□□□ -0.84
SMC5-201ENST00000361138 PRRC2AP48634 2157 aaKnown RBP9.79□□□□□ -0.84
SMC5-201ENST00000361138 NANOS2P60321 138 aaKnown RBP9.78□□□□□ -0.84
SMC5-201ENST00000361138 PCSK5Q92824 1860 aa9.78□□□□□ -0.84
SMC5-201ENST00000361138 IGHV3OR16-9A0A0B4J2B5 98 aa9.78□□□□□ -0.84
SMC5-201ENST00000361138 ANKHD1Q8IWZ3 2542 aaKnown RBP9.78□□□□□ -0.84
SMC5-201ENST00000361138 CREBBPQ92793 2442 aa9.78□□□□□ -0.84
SMC5-201ENST00000361138 LINC00208Q96KT6 92 aa9.78□□□□□ -0.84
SMC5-201ENST00000361138 PTPRQQ9UMZ3 2332 aa9.78□□□□□ -0.84
SMC5-201ENST00000361138 SPATA3Q8NHX4 192 aa9.78□□□□□ -0.84
SMC5-201ENST00000361138 FAM208BQ5VWN6 2430 aa9.77□□□□□ -0.84
SMC5-201ENST00000361138 IGLV1-51P01701 117 aa9.77□□□□□ -0.84
SMC5-201ENST00000361138 Q9UF83 564 aa9.77□□□□□ -0.85
SMC5-201ENST00000361138 KLK9Q2XQG4 91 aa9.77□□□□□ -0.85
SMC5-201ENST00000361138 NOTCH3Q9UM47 2321 aa9.77□□□□□ -0.85
SMC5-201ENST00000361138 COL27A1Q8IZC6 1860 aaPredicted RBP9.76□□□□□ -0.85
SMC5-201ENST00000361138 Q6ZQT0 140 aa9.76□□□□□ -0.85
SMC5-201ENST00000361138 LY6G6DO95868 133 aa9.75□□□□□ -0.85
SMC5-201ENST00000361138 Q8N9L7 120 aa9.75□□□□□ -0.85
SMC5-201ENST00000361138 LOC110117498A0A087WWA1 95 aa9.74□□□□□ -0.85
SMC5-201ENST00000361138 C10orf25Q5T742 122 aa9.74□□□□□ -0.85
SMC5-201ENST00000361138 KRTAP10-9P60411 292 aa9.72□□□□□ -0.85
SMC5-201ENST00000361138 TRAV10A0A0B4J240 114 aa9.72□□□□□ -0.85
SMC5-201ENST00000361138 HCG22E2RYF7 251 aa9.72□□□□□ -0.85
SMC5-201ENST00000361138 SMIM29Q86T20 159 aa9.72□□□□□ -0.85
SMC5-201ENST00000361138 REG3GQ6UW15 175 aa9.72□□□□□ -0.85
SMC5-201ENST00000361138 CASC2Q6XLA1 102 aa9.71□□□□□ -0.85
SMC5-201ENST00000361138 DNAH12Q6ZR08 3092 aa9.71□□□□□ -0.86
SMC5-201ENST00000361138 NCOR2Q9Y618 2525 aa9.7□□□□□ -0.86
SMC5-201ENST00000361138 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.69□□□□□ -0.86
SMC5-201ENST00000361138 F8WDY8 70 aa9.69□□□□□ -0.86
SMC5-201ENST00000361138 H0Y9P7 68 aa9.69□□□□□ -0.86
SMC5-201ENST00000361138 C2orf48Q96LS8 159 aa9.69□□□□□ -0.86
SMC5-201ENST00000361138 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.68□□□□□ -0.86
SMC5-201ENST00000361138 PLAC8L1A1L4L8 177 aa9.67□□□□□ -0.86
SMC5-201ENST00000361138 hDV103S1A0JD37 113 aa9.66□□□□□ -0.86
SMC5-201ENST00000361138 IGF2RP11717 2491 aa9.66□□□□□ -0.86
SMC5-201ENST00000361138 SMR3AQ99954 134 aa9.66□□□□□ -0.86
SMC5-201ENST00000361138 TM2D3Q9BRN9 247 aa9.66□□□□□ -0.86
SMC5-201ENST00000361138 Q6ZRU5 148 aa9.66□□□□□ -0.86
SMC5-201ENST00000361138 EIF4EBP3O60516 100 aaPredicted RBP9.66□□□□□ -0.86
SMC5-201ENST00000361138 C16orf95Q9H693 158 aa9.65□□□□□ -0.86
SMC5-201ENST00000361138 ZNF706Q9Y5V0 76 aaPredicted RBP9.65□□□□□ -0.86
SMC5-201ENST00000361138 IGLV9-49A0A0B4J1Y8 123 aa9.65□□□□□ -0.86
SMC5-201ENST00000361138 IGHV4-30-4P0DP06 118 aa9.65□□□□□ -0.87
SMC5-201ENST00000361138 ELOF1P60002 83 aaKnown RBP9.65□□□□□ -0.87
SMC5-201ENST00000361138 DEFB116Q30KQ4 102 aa9.65□□□□□ -0.87
SMC5-201ENST00000361138 C4orf48Q5BLP8 95 aa9.65□□□□□ -0.87
SMC5-201ENST00000361138 LYPD5Q6UWN5 251 aa9.64□□□□□ -0.87
SMC5-201ENST00000361138 KIAA0087Q14695 138 aa9.64□□□□□ -0.87
SMC5-201ENST00000361138 RETNQ9HD89 108 aa9.64□□□□□ -0.87
SMC5-201ENST00000361138 A0A087WSZ3 146 aa9.62□□□□□ -0.87
SMC5-201ENST00000361138 Q9BRP9 147 aa9.62□□□□□ -0.87
SMC5-201ENST00000361138 PIEZO1Q92508 2521 aa9.62□□□□□ -0.87
SMC5-201ENST00000361138 LIMD2Q9BT23 127 aa9.61□□□□□ -0.87
SMC5-201ENST00000361138 PCOTHQ58A44 107 aa9.61□□□□□ -0.87
SMC5-201ENST00000361138 CENPFP49454 3210 aa9.61□□□□□ -0.87
SMC5-201ENST00000361138 SPINK6Q6UWN8 80 aa9.61□□□□□ -0.87
SMC5-201ENST00000361138 C6orf48Q9UBA6 75 aa9.6□□□□□ -0.87
SMC5-201ENST00000361138 A0A1B0GW54 56 aa9.57□□□□□ -0.88
SMC5-201ENST00000361138 C1orf64Q8NEQ6 169 aa9.57□□□□□ -0.88
SMC5-201ENST00000361138 ACACBO00763 2458 aa9.56□□□□□ -0.88
SMC5-201ENST00000361138 LINC00474Q9P2X8 69 aa9.56□□□□□ -0.88
SMC5-201ENST00000361138 PIEZO2Q9H5I5 2752 aa9.56□□□□□ -0.88
SMC5-201ENST00000361138 IGHV6-1A0A0B4J1U7 121 aa9.56□□□□□ -0.88
SMC5-201ENST00000361138 ERC2-IT1O76042 136 aa9.56□□□□□ -0.88
SMC5-201ENST00000361138 Q6ZTC4 211 aa9.56□□□□□ -0.88
SMC5-201ENST00000361138 LINC01600Q96MT4 127 aa9.55□□□□□ -0.88
SMC5-201ENST00000361138 ZNF575Q86XF7 245 aa9.55□□□□□ -0.88
SMC5-201ENST00000361138 C7orf33Q8WU49 177 aa9.55□□□□□ -0.88
SMC5-201ENST00000361138 C22orf24Q9Y442 160 aa9.53□□□□□ -0.88
SMC5-201ENST00000361138 CEP350Q5VT06 3117 aa9.53□□□□□ -0.88
SMC5-201ENST00000361138 IGLV6-57P01721 117 aa9.53□□□□□ -0.88
SMC5-201ENST00000361138 K7ERS5 55 aa9.53□□□□□ -0.88
SMC5-201ENST00000361138 WDR87Q6ZQQ6 2873 aa9.52□□□□□ -0.88
SMC5-201ENST00000361138 KLKP1Q107X0 134 aa9.52□□□□□ -0.88
SMC5-201ENST00000361138 SORL1Q92673 2214 aa9.52□□□□□ -0.89
SMC5-201ENST00000361138 HIVEP2P31629 2446 aa9.52□□□□□ -0.89
SMC5-201ENST00000361138 PRLHP81277 87 aa9.49□□□□□ -0.89
SMC5-201ENST00000361138 H7BZZ5 65 aa9.49□□□□□ -0.89
SMC5-201ENST00000361138 C9orf129Q5T035 196 aaKnown RBP9.49□□□□□ -0.89
SMC5-201ENST00000361138 PTPN13Q12923 2485 aa9.49□□□□□ -0.89
SMC5-201ENST00000361138 OXLD1Q5BKU9 147 aa9.49□□□□□ -0.89
SMC5-201ENST00000361138 SPG11Q96JI7 2443 aa9.49□□□□□ -0.89
SMC5-201ENST00000361138 LINC00336Q6ZUF6 198 aa9.49□□□□□ -0.89
SMC5-201ENST00000361138 Q8NBF4 154 aa9.48□□□□□ -0.89
SMC5-201ENST00000361138 X6R8D5 127 aa9.47□□□□□ -0.89
SMC5-201ENST00000361138 GVQW2A0A096LPI5 108 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms