RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 CRIP1P50238 77 aa12.71□□□□□ -0.38
CACNA1A-201ENST00000360228 CYSRT1A8MQ03 144 aa12.69□□□□□ -0.38
CACNA1A-201ENST00000360228 LINC00575Q6W349 94 aa12.69□□□□□ -0.38
CACNA1A-201ENST00000360228 IGLV5-52A0A0A0MRZ9 124 aa12.69□□□□□ -0.38
CACNA1A-201ENST00000360228 USP9YO00507 2555 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-201ENST00000360228 CRIP2P52943 208 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-201ENST00000360228 IGFL2Q6UWQ7 119 aa12.68□□□□□ -0.38
CACNA1A-201ENST00000360228 Q8IZM0 81 aa12.68□□□□□ -0.38
CACNA1A-201ENST00000360228 LTBP2Q14767 1821 aa12.68□□□□□ -0.38
CACNA1A-201ENST00000360228 C9orf116Q5BN46 136 aaPredicted RBP12.67□□□□□ -0.38
CACNA1A-201ENST00000360228 COL4A4P53420 1690 aaPredicted RBP12.67□□□□□ -0.38
CACNA1A-201ENST00000360228 ODF3BA8MYP8 253 aa12.67□□□□□ -0.38
CACNA1A-201ENST00000360228 ACYP2P14621 99 aa12.67□□□□□ -0.38
CACNA1A-201ENST00000360228 Q9BRP9 147 aa12.67□□□□□ -0.38
CACNA1A-201ENST00000360228 HCG22E2RYF7 251 aa12.66□□□□□ -0.38
CACNA1A-201ENST00000360228 A0A087WVE0 104 aa12.66□□□□□ -0.38
CACNA1A-201ENST00000360228 PRM2P04554 102 aa12.66□□□□□ -0.38
CACNA1A-201ENST00000360228 A0A087WYN8 130 aa12.66□□□□□ -0.38
CACNA1A-201ENST00000360228 IGKV2D-30A0A075B6S6 120 aa12.66□□□□□ -0.38
CACNA1A-201ENST00000360228 IGKV2-30P06310 120 aa12.66□□□□□ -0.38
CACNA1A-201ENST00000360228 PLA2G5P39877 138 aa12.65□□□□□ -0.38
CACNA1A-201ENST00000360228 PRR3P79522 188 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-201ENST00000360228 SHISA2Q6UWI4 295 aa12.65□□□□□ -0.38
CACNA1A-201ENST00000360228 LINC01556Q5JQF7 62 aa12.65□□□□□ -0.38
CACNA1A-201ENST00000360228 ATP11AUNQ6ZP68 121 aa12.64□□□□□ -0.39
CACNA1A-201ENST00000360228 Q9UF83 564 aa12.64□□□□□ -0.39
CACNA1A-201ENST00000360228 MSMPQ1L6U9 139 aa12.64□□□□□ -0.39
CACNA1A-201ENST00000360228 USP24Q9UPU5 2620 aa12.63□□□□□ -0.39
CACNA1A-201ENST00000360228 ANKRD11Q6UB99 2663 aaPredicted RBP12.63□□□□□ -0.39
CACNA1A-201ENST00000360228 IGLV2-11P01706 119 aa12.63□□□□□ -0.39
CACNA1A-201ENST00000360228 BCE1O60756 84 aa12.63□□□□□ -0.39
CACNA1A-201ENST00000360228 C11orf1Q9H5F2 150 aa12.62□□□□□ -0.39
CACNA1A-201ENST00000360228 PRRC2CQ9Y520 2896 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-201ENST00000360228 C6orf223Q8N319 242 aa12.62□□□□□ -0.39
CACNA1A-201ENST00000360228 C1orf64Q8NEQ6 169 aa12.61□□□□□ -0.39
CACNA1A-201ENST00000360228 FSHBP01225 129 aa12.6□□□□□ -0.39
CACNA1A-201ENST00000360228 CNFNQ9BYD5 112 aa12.6□□□□□ -0.39
CACNA1A-201ENST00000360228 C4orf26Q17RF5 130 aa12.6□□□□□ -0.39
CACNA1A-201ENST00000360228 C10orf99Q6UWK7 81 aa12.59□□□□□ -0.39
CACNA1A-201ENST00000360228 UNQ6190/PRO20217Q6UXQ8 127 aa12.59□□□□□ -0.39
CACNA1A-201ENST00000360228 CDC42SE2Q9NRR3 84 aa12.58□□□□□ -0.4
CACNA1A-201ENST00000360228 CHD8Q9HCK8 2581 aa12.58□□□□□ -0.4
CACNA1A-201ENST00000360228 TP53AIP1Q9HCN2 124 aa12.58□□□□□ -0.4
CACNA1A-201ENST00000360228 C2orf48Q96LS8 159 aa12.58□□□□□ -0.4
CACNA1A-201ENST00000360228 Q6ZTC4 211 aa12.57□□□□□ -0.4
CACNA1A-201ENST00000360228 LINC00337Q8N6G1 96 aa12.56□□□□□ -0.4
CACNA1A-201ENST00000360228 MDFIQ99750 246 aa12.56□□□□□ -0.4
CACNA1A-201ENST00000360228 A0A087WSZ3 146 aa12.56□□□□□ -0.4
CACNA1A-201ENST00000360228 LMO4P61968 165 aa12.56□□□□□ -0.4
CACNA1A-201ENST00000360228 LINC00574Q9H8X3 128 aa12.56□□□□□ -0.4
CACNA1A-201ENST00000360228 C18orf65Q6ZTR6 163 aa12.55□□□□□ -0.4
CACNA1A-201ENST00000360228 SSBP3-AS1Q7Z2R9 100 aa12.55□□□□□ -0.4
CACNA1A-201ENST00000360228 P0C879 139 aa12.55□□□□□ -0.4
CACNA1A-201ENST00000360228 Q6ZSV7 163 aa12.55□□□□□ -0.4
CACNA1A-201ENST00000360228 COX6A2Q02221 97 aa12.55□□□□□ -0.4
CACNA1A-201ENST00000360228 A0A1B0GW54 56 aa12.54□□□□□ -0.4
CACNA1A-201ENST00000360228 MRGPRG-AS1Q2M3A8 158 aa12.54□□□□□ -0.4
CACNA1A-201ENST00000360228 ZNF702PQ9H963 129 aa12.54□□□□□ -0.4
CACNA1A-201ENST00000360228 IGLV8-61A0A075B6I0 122 aa12.53□□□□□ -0.4
CACNA1A-201ENST00000360228 PRR9Q5T870 116 aa12.52□□□□□ -0.41
CACNA1A-201ENST00000360228 LY6G6DO95868 133 aa12.52□□□□□ -0.41
CACNA1A-201ENST00000360228 FSTL3O95633 263 aa12.52□□□□□ -0.41
CACNA1A-201ENST00000360228 SRCAPQ6ZRS2 3230 aa12.51□□□□□ -0.41
CACNA1A-201ENST00000360228 EGFEM1PQ0D2K5 195 aa12.51□□□□□ -0.41
CACNA1A-201ENST00000360228 C6orf48Q9UBA6 75 aa12.51□□□□□ -0.41
CACNA1A-201ENST00000360228 FBXL19-AS1Q494R0 122 aa12.5□□□□□ -0.41
CACNA1A-201ENST00000360228 KLLNB2CW77 178 aa12.49□□□□□ -0.41
CACNA1A-201ENST00000360228 GAS8-AS1O95177 125 aa12.48□□□□□ -0.41
CACNA1A-201ENST00000360228 IGF2RP11717 2491 aa12.48□□□□□ -0.41
CACNA1A-201ENST00000360228 A8MTW9 85 aa12.48□□□□□ -0.41
CACNA1A-201ENST00000360228 PSMG3-AS1Q96PY0 264 aa12.48□□□□□ -0.41
CACNA1A-201ENST00000360228 F8WDY8 70 aa12.47□□□□□ -0.41
CACNA1A-201ENST00000360228 BPTFQ12830 3046 aa12.46□□□□□ -0.41
CACNA1A-201ENST00000360228 CRIPTQ9P021 101 aa12.46□□□□□ -0.41
CACNA1A-201ENST00000360228 C19orf84I3L1E1 186 aa12.46□□□□□ -0.41
CACNA1A-201ENST00000360228 C1orf229Q6ZS94 237 aaPredicted RBP12.46□□□□□ -0.41
CACNA1A-201ENST00000360228 POLR2KP53803 58 aaKnown RBP12.46□□□□□ -0.42
CACNA1A-201ENST00000360228 CD164Q04900 197 aa12.45□□□□□ -0.42
CACNA1A-201ENST00000360228 Q8NA96 180 aa12.45□□□□□ -0.42
CACNA1A-201ENST00000360228 FASNP49327 2511 aaKnown RBP12.45□□□□□ -0.42
CACNA1A-201ENST00000360228 LINC00242Q5T6M2 205 aa12.44□□□□□ -0.42
CACNA1A-201ENST00000360228 SMIM1B2RUZ4 78 aa12.44□□□□□ -0.42
CACNA1A-201ENST00000360228 IGIPA6NJ69 53 aa12.43□□□□□ -0.42
CACNA1A-201ENST00000360228 BRWD1-AS2P59051 145 aa12.42□□□□□ -0.42
CACNA1A-201ENST00000360228 SMIM29Q86T20 159 aa12.42□□□□□ -0.42
CACNA1A-201ENST00000360228 ADAMTSL4-AS1Q5T5F5 129 aa12.42□□□□□ -0.42
CACNA1A-201ENST00000360228 ZNF295-AS1Q8N0V1 137 aa12.41□□□□□ -0.42
CACNA1A-201ENST00000360228 LINC01006Q8NI28 216 aa12.4□□□□□ -0.42
CACNA1A-201ENST00000360228 C11orf21Q9P2W6 132 aa12.4□□□□□ -0.42
CACNA1A-201ENST00000360228 H3BPC8 53 aa12.4□□□□□ -0.42
CACNA1A-201ENST00000360228 SPACA4Q8TDM5 124 aa12.4□□□□□ -0.42
CACNA1A-201ENST00000360228 LINC00846Q9NV44 126 aa12.39□□□□□ -0.43
CACNA1A-201ENST00000360228 IGLV4-60A0A075B6I1 120 aa12.38□□□□□ -0.43
CACNA1A-201ENST00000360228 BRI3O95415 125 aa12.38□□□□□ -0.43
CACNA1A-201ENST00000360228 LUZP6Q538Z0 58 aa12.38□□□□□ -0.43
CACNA1A-201ENST00000360228 CYP4F30PQ9H0H9 118 aa12.38□□□□□ -0.43
CACNA1A-201ENST00000360228 COL4A3Q01955 1670 aa12.37□□□□□ -0.43
CACNA1A-201ENST00000360228 EPG5Q9HCE0 2579 aa12.37□□□□□ -0.43
CACNA1A-201ENST00000360228 WISP2O76076 250 aa12.36□□□□□ -0.43
CACNA1A-201ENST00000360228 C1orf134Q5TEV5 83 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms