RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 C2orf82Q6UX34 121 aa11.33□□□□□ -0.6
TPM1-205ENST00000357980 C15orf56Q8N910 161 aa11.33□□□□□ -0.6
TPM1-205ENST00000357980 CXCL5P42830 114 aa11.32□□□□□ -0.6
TPM1-205ENST00000357980 RMI2Q96E14 147 aa11.32□□□□□ -0.6
TPM1-205ENST00000357980 SPANXDQ9BXN6 97 aa11.32□□□□□ -0.6
TPM1-205ENST00000357980 SPANXCQ9NY87 97 aa11.32□□□□□ -0.6
TPM1-205ENST00000357980 LBHQ53QV2 105 aaPredicted RBP11.32□□□□□ -0.6
TPM1-205ENST00000357980 CFAP161Q6P656 301 aa11.32□□□□□ -0.6
TPM1-205ENST00000357980 CKS1BP61024 79 aa11.31□□□□□ -0.6
TPM1-205ENST00000357980 CIRBPQ14011 172 aaKnown RBP11.3□□□□□ -0.6
TPM1-205ENST00000357980 C6orf223Q8N319 242 aa11.3□□□□□ -0.6
TPM1-205ENST00000357980 MEIG1Q5JSS6 88 aa11.3□□□□□ -0.6
TPM1-205ENST00000357980 Q6ZVH6 145 aa11.3□□□□□ -0.6
TPM1-205ENST00000357980 LINC00526Q96FQ7 95 aa11.3□□□□□ -0.6
TPM1-205ENST00000357980 NBDYA0A0U1RRE5 68 aa11.29□□□□□ -0.6
TPM1-205ENST00000357980 SMIM13P0DJ93 91 aa11.29□□□□□ -0.6
TPM1-205ENST00000357980 TTC32Q5I0X7 151 aa11.29□□□□□ -0.6
TPM1-205ENST00000357980 CASC10Q5T4H9 136 aa11.29□□□□□ -0.6
TPM1-205ENST00000357980 COL5A1-AS1Q5SY13 56 aa11.28□□□□□ -0.6
TPM1-205ENST00000357980 DAND5Q8N907 189 aa11.28□□□□□ -0.6
TPM1-205ENST00000357980 NTN5Q8WTR8 489 aaPredicted RBP11.28□□□□□ -0.6
TPM1-205ENST00000357980 COX11Q9Y6N1 276 aa11.28□□□□□ -0.6
TPM1-205ENST00000357980 GVQW2A0A096LPI5 108 aaPredicted RBP11.28□□□□□ -0.6
TPM1-205ENST00000357980 HIGD2BQ4VC39 106 aa11.28□□□□□ -0.6
TPM1-205ENST00000357980 A0A0U1RRA0 63 aa11.27□□□□□ -0.61
TPM1-205ENST00000357980 PTTG1IPP53801 180 aa11.27□□□□□ -0.61
TPM1-205ENST00000357980 C10orf25Q5T742 122 aa11.27□□□□□ -0.61
TPM1-205ENST00000357980 MUSTN1Q8IVN3 82 aa11.27□□□□□ -0.61
TPM1-205ENST00000357980 ERG28Q9UKR5 140 aa11.27□□□□□ -0.61
TPM1-205ENST00000357980 UNQ6190/PRO20217Q6UXQ8 127 aa11.26□□□□□ -0.61
TPM1-205ENST00000357980 A6NDN8 102 aa11.25□□□□□ -0.61
TPM1-205ENST00000357980 ZNF561-AS1K7EIQ3 104 aa11.25□□□□□ -0.61
TPM1-205ENST00000357980 EIF4EBP3O60516 100 aaPredicted RBP11.25□□□□□ -0.61
TPM1-205ENST00000357980 IFITM1P13164 125 aa11.25□□□□□ -0.61
TPM1-205ENST00000357980 USP17L23D6RBM5 183 aa11.24□□□□□ -0.61
TPM1-205ENST00000357980 C2orf48Q96LS8 159 aa11.24□□□□□ -0.61
TPM1-205ENST00000357980 NHP2Q9NX24 153 aaKnown RBP11.24□□□□□ -0.61
TPM1-205ENST00000357980 DNAH10Q8IVF4 4471 aa11.24□□□□□ -0.61
TPM1-205ENST00000357980 TMEM238LA0A1B0GVL6 79 aa11.23□□□□□ -0.61
TPM1-205ENST00000357980 A0A1B0GWB2 263 aa11.23□□□□□ -0.61
TPM1-205ENST00000357980 A6NJY4 79 aa11.23□□□□□ -0.61
TPM1-205ENST00000357980 C3orf84H3BNL1 204 aa11.23□□□□□ -0.61
TPM1-205ENST00000357980 PFN2P35080 140 aa11.23□□□□□ -0.61
TPM1-205ENST00000357980 LINC00158P58513 81 aa11.23□□□□□ -0.61
TPM1-205ENST00000357980 RPL24P83731 157 aaKnown RBP11.23□□□□□ -0.61
TPM1-205ENST00000357980 MIR7-3HGQ8N6C7 128 aa11.23□□□□□ -0.61
TPM1-205ENST00000357980 LINC00308Q8TCZ7 52 aa11.23□□□□□ -0.61
TPM1-205ENST00000357980 NPC2P61916 151 aa11.23□□□□□ -0.61
TPM1-205ENST00000357980 COX17Q14061 63 aa11.23□□□□□ -0.61
TPM1-205ENST00000357980 C9orf116Q5BN46 136 aaPredicted RBP11.23□□□□□ -0.61
TPM1-205ENST00000357980 SOSTDC1Q6X4U4 206 aa11.23□□□□□ -0.61
TPM1-205ENST00000357980 A4D1N5 150 aa11.22□□□□□ -0.61
TPM1-205ENST00000357980 PPDPFQ9H3Y8 114 aa11.22□□□□□ -0.61
TPM1-205ENST00000357980 F8WDY8 70 aa11.21□□□□□ -0.61
TPM1-205ENST00000357980 K7ERJ3 54 aa11.21□□□□□ -0.61
TPM1-205ENST00000357980 CAMK2N2Q96S95 79 aa11.21□□□□□ -0.61
TPM1-205ENST00000357980 C6orf48Q9UBA6 75 aa11.21□□□□□ -0.61
TPM1-205ENST00000357980 TAX1BP3O14907 124 aa11.21□□□□□ -0.62
TPM1-205ENST00000357980 TRBV30A0A0K0K1B3 111 aa11.2□□□□□ -0.62
TPM1-205ENST00000357980 Q6ZR54 194 aa11.2□□□□□ -0.62
TPM1-205ENST00000357980 Q6ZRN7 208 aaPredicted RBP11.2□□□□□ -0.62
TPM1-205ENST00000357980 CFC1BP0CG36 223 aa11.19□□□□□ -0.62
TPM1-205ENST00000357980 CFC1P0CG37 223 aa11.19□□□□□ -0.62
TPM1-205ENST00000357980 Q6ZRU5 148 aa11.19□□□□□ -0.62
TPM1-205ENST00000357980 COPS9Q8WXC6 57 aa11.19□□□□□ -0.62
TPM1-205ENST00000357980 LINC00476Q8WZB0 136 aa11.19□□□□□ -0.62
TPM1-205ENST00000357980 KMT2AQ03164 3969 aa11.19□□□□□ -0.62
TPM1-205ENST00000357980 M0R2N4 97 aa11.19□□□□□ -0.62
TPM1-205ENST00000357980 LECT2O14960 151 aa11.19□□□□□ -0.62
TPM1-205ENST00000357980 WFDC2Q14508 124 aa11.19□□□□□ -0.62
TPM1-205ENST00000357980 PSCAO43653 123 aa11.18□□□□□ -0.62
TPM1-205ENST00000357980 SLPIP03973 132 aa11.17□□□□□ -0.62
TPM1-205ENST00000357980 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.16□□□□□ -0.62
TPM1-205ENST00000357980 LY6G6CO95867 125 aa11.16□□□□□ -0.62
TPM1-205ENST00000357980 SYCNQ0VAF6 134 aa11.16□□□□□ -0.62
TPM1-205ENST00000357980 A0A0B4J2C4 111 aa11.16□□□□□ -0.62
TPM1-205ENST00000357980 LOC107984156A0A0G2JMH3 177 aa11.16□□□□□ -0.62
TPM1-205ENST00000357980 ARL17AQ8IVW1 177 aa11.16□□□□□ -0.62
TPM1-205ENST00000357980 RAB37Q96AX2 223 aa11.16□□□□□ -0.62
TPM1-205ENST00000357980 ALMS1Q8TCU4 4167 aa11.15□□□□□ -0.63
TPM1-205ENST00000357980 SND1-IT1Q9HBX3 110 aa11.14□□□□□ -0.63
TPM1-205ENST00000357980 CARD19Q96LW7 228 aa11.14□□□□□ -0.63
TPM1-205ENST00000357980 A0A1B0GV90 55 aa11.13□□□□□ -0.63
TPM1-205ENST00000357980 LRCOL1A6NCL2 159 aa11.12□□□□□ -0.63
TPM1-205ENST00000357980 RNF151Q2KHN1 245 aa11.12□□□□□ -0.63
TPM1-205ENST00000357980 DNAH6Q9C0G6 4158 aa11.12□□□□□ -0.63
TPM1-205ENST00000357980 C9orf118A6NHY6 69 aa11.12□□□□□ -0.63
TPM1-205ENST00000357980 PRO1854Q9UHT4 67 aa11.12□□□□□ -0.63
TPM1-205ENST00000357980 NDUFC2-KCTD14E9PQ53 114 aa11.11□□□□□ -0.63
TPM1-205ENST00000357980 C14orf177Q52M58 125 aa11.09□□□□□ -0.63
TPM1-205ENST00000357980 NAA38Q9BRA0 125 aaKnown RBP11.09□□□□□ -0.63
TPM1-205ENST00000357980 PGPEP1Q9NXJ5 209 aa11.09□□□□□ -0.63
TPM1-205ENST00000357980 IGKV2-28A0A075B6P5 120 aa11.09□□□□□ -0.63
TPM1-205ENST00000357980 IGKV2D-28P01615 120 aa11.09□□□□□ -0.63
TPM1-205ENST00000357980 CNBPP62633 177 aaKnown RBP11.09□□□□□ -0.63
TPM1-205ENST00000357980 DNAH2Q9P225 4427 aa11.09□□□□□ -0.63
TPM1-205ENST00000357980 H3BUT2 72 aa11.08□□□□□ -0.64
TPM1-205ENST00000357980 TSPAN13O95857 204 aa11.08□□□□□ -0.64
TPM1-205ENST00000357980 TLX1NBP0CAT3 122 aa11.08□□□□□ -0.64
TPM1-205ENST00000357980 Q6ZRP5 223 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms