RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 LINC01006Q8NI28 216 aa12.33□□□□□ -0.44
RTN4-204ENST00000357732 RNASE1P07998 156 aaKnown RBP12.33□□□□□ -0.44
RTN4-204ENST00000357732 PFN2P35080 140 aa12.33□□□□□ -0.44
RTN4-204ENST00000357732 SETXQ7Z333 2677 aaKnown RBP12.32□□□□□ -0.44
RTN4-204ENST00000357732 LECT2O14960 151 aa12.32□□□□□ -0.44
RTN4-204ENST00000357732 PLA2G2AP14555 144 aa12.32□□□□□ -0.44
RTN4-204ENST00000357732 C9orf153Q5TBE3 101 aa12.32□□□□□ -0.44
RTN4-204ENST00000357732 ORMDL1Q9P0S3 153 aa12.32□□□□□ -0.44
RTN4-204ENST00000357732 LINC00167Q96N53 147 aa12.31□□□□□ -0.44
RTN4-204ENST00000357732 OR13C6PQ8NH95 151 aa12.3□□□□□ -0.44
RTN4-204ENST00000357732 FLNAP21333 2647 aaKnown RBP12.3□□□□□ -0.44
RTN4-204ENST00000357732 NDUFC2O95298 119 aa12.3□□□□□ -0.44
RTN4-204ENST00000357732 COX7CP15954 63 aa12.3□□□□□ -0.44
RTN4-204ENST00000357732 COX17Q14061 63 aa12.3□□□□□ -0.44
RTN4-204ENST00000357732 SMIM20Q8N5G0 67 aa12.3□□□□□ -0.44
RTN4-204ENST00000357732 C14orf132Q9NPU4 83 aa12.3□□□□□ -0.44
RTN4-204ENST00000357732 CCDC168Q8NDH2 2452 aa12.29□□□□□ -0.44
RTN4-204ENST00000357732 KRTAP1-1Q07627 177 aa12.28□□□□□ -0.44
RTN4-204ENST00000357732 JMJD1CQ15652 2540 aa12.27□□□□□ -0.44
RTN4-204ENST00000357732 SETD2Q9BYW2 2564 aaPredicted RBP12.27□□□□□ -0.44
RTN4-204ENST00000357732 JMJD7-PLA2G4BH0Y9G9 81 aa12.27□□□□□ -0.44
RTN4-204ENST00000357732 SMIM9A6NGZ8 99 aa12.27□□□□□ -0.45
RTN4-204ENST00000357732 NOTCH3Q9UM47 2321 aa12.26□□□□□ -0.45
RTN4-204ENST00000357732 GYPEP15421 78 aa12.26□□□□□ -0.45
RTN4-204ENST00000357732 S100A7L2Q5SY68 101 aa12.26□□□□□ -0.45
RTN4-204ENST00000357732 C9orf129Q5T035 196 aaKnown RBP12.26□□□□□ -0.45
RTN4-204ENST00000357732 CRYGAP11844 174 aa12.26□□□□□ -0.45
RTN4-204ENST00000357732 RPL18AQ02543 176 aaKnown RBP12.26□□□□□ -0.45
RTN4-204ENST00000357732 PRO0255Q9UI72 69 aa12.26□□□□□ -0.45
RTN4-204ENST00000357732 XCL1P47992 114 aa12.25□□□□□ -0.45
RTN4-204ENST00000357732 LINC00846Q9NV44 126 aa12.25□□□□□ -0.45
RTN4-204ENST00000357732 C2CD3Q4AC94 2353 aa12.25□□□□□ -0.45
RTN4-204ENST00000357732 C2orf48Q96LS8 159 aa12.25□□□□□ -0.45
RTN4-204ENST00000357732 CCKP06307 115 aa12.24□□□□□ -0.45
RTN4-204ENST00000357732 MUC7Q8TAX7 377 aa12.24□□□□□ -0.45
RTN4-204ENST00000357732 IGHV4-28A0A0C4DH34 117 aa12.23□□□□□ -0.45
RTN4-204ENST00000357732 TMEM256-PLSCR3K7ERE1 68 aa12.23□□□□□ -0.45
RTN4-204ENST00000357732 DEFB130BP0DP73 79 aa12.23□□□□□ -0.45
RTN4-204ENST00000357732 DEFB130AP0DP74 79 aa12.23□□□□□ -0.45
RTN4-204ENST00000357732 CD164L2Q6UWJ8 174 aa12.23□□□□□ -0.45
RTN4-204ENST00000357732 ATP5EP2Q5VTU8 51 aa12.22□□□□□ -0.45
RTN4-204ENST00000357732 TENM4Q6N022 2769 aa12.22□□□□□ -0.45
RTN4-204ENST00000357732 NCR3O14931 201 aa12.22□□□□□ -0.45
RTN4-204ENST00000357732 Q8N814 137 aa12.22□□□□□ -0.45
RTN4-204ENST00000357732 ANK3Q12955 4377 aaKnown RBP12.22□□□□□ -0.45
RTN4-204ENST00000357732 NANOS2P60321 138 aaKnown RBP12.2□□□□□ -0.46
RTN4-204ENST00000357732 CFAP161Q6P656 301 aa12.2□□□□□ -0.46
RTN4-204ENST00000357732 C11orf68Q9H3H3 251 aaKnown RBP12.2□□□□□ -0.46
RTN4-204ENST00000357732 PDZD2O15018 2839 aa12.2□□□□□ -0.46
RTN4-204ENST00000357732 LYRM9A8MSI8 78 aa12.2□□□□□ -0.46
RTN4-204ENST00000357732 KIAA0087Q14695 138 aa12.2□□□□□ -0.46
RTN4-204ENST00000357732 SLPIP03973 132 aa12.18□□□□□ -0.46
RTN4-204ENST00000357732 X6R8D5 127 aa12.18□□□□□ -0.46
RTN4-204ENST00000357732 ACANP16112 2415 aa12.18□□□□□ -0.46
RTN4-204ENST00000357732 SERP2Q8N6R1 65 aa12.17□□□□□ -0.46
RTN4-204ENST00000357732 IGKV3D-7A0A0C4DH55 119 aa12.16□□□□□ -0.46
RTN4-204ENST00000357732 HILS1P60008 231 aa12.16□□□□□ -0.46
RTN4-204ENST00000357732 C3orf56Q8N813 242 aa12.16□□□□□ -0.46
RTN4-204ENST00000357732 MTORP42345 2549 aa12.16□□□□□ -0.46
RTN4-204ENST00000357732 CHCHD10Q8WYQ3 142 aaPredicted RBP12.14□□□□□ -0.47
RTN4-204ENST00000357732 LYPD5Q6UWN5 251 aa12.14□□□□□ -0.47
RTN4-204ENST00000357732 LINC00269Q8N2A0 174 aa12.14□□□□□ -0.47
RTN4-204ENST00000357732 TRBV10-3A0A0K0K1G6 114 aa12.13□□□□□ -0.47
RTN4-204ENST00000357732 USP17L23D6RBM5 183 aa12.13□□□□□ -0.47
RTN4-204ENST00000357732 H3BQ85 93 aa12.13□□□□□ -0.47
RTN4-204ENST00000357732 CLPSL2Q6UWE3 100 aa12.13□□□□□ -0.47
RTN4-204ENST00000357732 KRTAP10-3P60369 221 aa12.12□□□□□ -0.47
RTN4-204ENST00000357732 REG3AQ06141 175 aa12.12□□□□□ -0.47
RTN4-204ENST00000357732 RPS28P62857 69 aaKnown RBP12.12□□□□□ -0.47
RTN4-204ENST00000357732 LINC00482Q8N8I6 264 aa12.12□□□□□ -0.47
RTN4-204ENST00000357732 J3KT08 172 aa12.11□□□□□ -0.47
RTN4-204ENST00000357732 hADV29S1A0JD25 119 aa12.1□□□□□ -0.47
RTN4-204ENST00000357732 ANGP03950 147 aaKnown RBP12.1□□□□□ -0.47
RTN4-204ENST00000357732 TMEM258P61165 79 aa12.1□□□□□ -0.47
RTN4-204ENST00000357732 LINC00575Q6W349 94 aa12.1□□□□□ -0.47
RTN4-204ENST00000357732 C6orf99Q4VX62 202 aa12.09□□□□□ -0.47
RTN4-204ENST00000357732 PRR3P79522 188 aaKnown RBP12.08□□□□□ -0.47
RTN4-204ENST00000357732 SMR3AQ99954 134 aa12.08□□□□□ -0.47
RTN4-204ENST00000357732 UBL5Q9BZL1 73 aa12.08□□□□□ -0.47
RTN4-204ENST00000357732 UPK3BQ9BT76 320 aa12.08□□□□□ -0.48
RTN4-204ENST00000357732 A0A087WVE0 104 aa12.07□□□□□ -0.48
RTN4-204ENST00000357732 A0A0J9YWU9 116 aa12.07□□□□□ -0.48
RTN4-204ENST00000357732 IGHV4-30-4P0DP06 118 aa12.07□□□□□ -0.48
RTN4-204ENST00000357732 ITPR2Q14571 2701 aa12.07□□□□□ -0.48
RTN4-204ENST00000357732 LOC110117498A0A087WWA1 95 aa12.07□□□□□ -0.48
RTN4-204ENST00000357732 A0A096LPF7 62 aa12.07□□□□□ -0.48
RTN4-204ENST00000357732 ZNF561-AS1K7EIQ3 104 aa12.07□□□□□ -0.48
RTN4-204ENST00000357732 BCE1O60756 84 aa12.04□□□□□ -0.48
RTN4-204ENST00000357732 PDE6GP18545 87 aa12.04□□□□□ -0.48
RTN4-204ENST00000357732 APOC4P55056 127 aa12.04□□□□□ -0.48
RTN4-204ENST00000357732 RBM3P98179 157 aaKnown RBP12.04□□□□□ -0.48
RTN4-204ENST00000357732 GVQW2A0A096LPI5 108 aaPredicted RBP12.04□□□□□ -0.48
RTN4-204ENST00000357732 IGLV6-57P01721 117 aa12.04□□□□□ -0.48
RTN4-204ENST00000357732 C9orf66Q5T8R8 295 aa12.04□□□□□ -0.48
RTN4-204ENST00000357732 C6orf223Q8N319 242 aa12.04□□□□□ -0.48
RTN4-204ENST00000357732 DAD1P61803 113 aa12.03□□□□□ -0.48
RTN4-204ENST00000357732 SPAG11BQ08648 103 aa12.03□□□□□ -0.48
RTN4-204ENST00000357732 Q6ZQT0 140 aa12.03□□□□□ -0.48
RTN4-204ENST00000357732 SPATA3Q8NHX4 192 aa12.03□□□□□ -0.48
RTN4-204ENST00000357732 IGLV10-54A0A075B6I4 117 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms