RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 LMO4P61968 165 aa4.82□□□□□ -1.64
VPS13B-202ENST00000357162 Q8N3U1 123 aa4.82□□□□□ -1.64
VPS13B-202ENST00000357162 TENM1Q9UKZ4 2725 aa4.82□□□□□ -1.64
VPS13B-202ENST00000357162 DEFB112Q30KQ8 113 aa4.82□□□□□ -1.64
VPS13B-202ENST00000357162 HRCT1Q6UXD1 115 aa4.82□□□□□ -1.64
VPS13B-202ENST00000357162 FRYLO94915 3013 aa4.82□□□□□ -1.64
VPS13B-202ENST00000357162 MPLKIPQ8TAP9 179 aa4.82□□□□□ -1.64
VPS13B-202ENST00000357162 KLK12Q9UKR0 248 aa4.82□□□□□ -1.64
VPS13B-202ENST00000357162 LRBAP50851 2863 aa4.82□□□□□ -1.64
VPS13B-202ENST00000357162 RNF223E7ERA6 249 aa4.82□□□□□ -1.64
VPS13B-202ENST00000357162 LY6HO94772 140 aa4.81□□□□□ -1.64
VPS13B-202ENST00000357162 LINC00269Q8N2A0 174 aa4.81□□□□□ -1.64
VPS13B-202ENST00000357162 SMIM11BQ8TCY0 68 aa4.81□□□□□ -1.64
VPS13B-202ENST00000357162 Q96MF0 132 aa4.81□□□□□ -1.64
VPS13B-202ENST00000357162 IGLV1-40P01703 118 aa4.81□□□□□ -1.64
VPS13B-202ENST00000357162 HILS1P60008 231 aa4.81□□□□□ -1.64
VPS13B-202ENST00000357162 SHISA2Q6UWI4 295 aa4.81□□□□□ -1.64
VPS13B-202ENST00000357162 WISP2O76076 250 aa4.81□□□□□ -1.64
VPS13B-202ENST00000357162 DEFB105AQ8NG35 78 aa4.81□□□□□ -1.64
VPS13B-202ENST00000357162 SMIM1B2RUZ4 78 aa4.8□□□□□ -1.64
VPS13B-202ENST00000357162 ZFP36P26651 326 aaKnown RBP4.8□□□□□ -1.64
VPS13B-202ENST00000357162 IGLV10-54A0A075B6I4 117 aa4.8□□□□□ -1.64
VPS13B-202ENST00000357162 PLAC8L1A1L4L8 177 aa4.8□□□□□ -1.64
VPS13B-202ENST00000357162 SPRY2O43597 315 aa4.8□□□□□ -1.64
VPS13B-202ENST00000357162 CLPSL2Q6UWE3 100 aa4.8□□□□□ -1.64
VPS13B-202ENST00000357162 A0A096LNJ9 63 aa4.8□□□□□ -1.64
VPS13B-202ENST00000357162 Q8N2B8 174 aa4.8□□□□□ -1.64
VPS13B-202ENST00000357162 IGHV4-28A0A0C4DH34 117 aa4.8□□□□□ -1.64
VPS13B-202ENST00000357162 Q6ZTI0 123 aa4.79□□□□□ -1.64
VPS13B-202ENST00000357162 IGHV4-61A0A0C4DH41 118 aa4.79□□□□□ -1.64
VPS13B-202ENST00000357162 DEFB113Q30KQ7 82 aa4.79□□□□□ -1.64
VPS13B-202ENST00000357162 IGHV4-38-2P0DP08 117 aa4.79□□□□□ -1.64
VPS13B-202ENST00000357162 LINC00208Q96KT6 92 aa4.79□□□□□ -1.64
VPS13B-202ENST00000357162 CYP4F30PQ9H0H9 118 aa4.79□□□□□ -1.64
VPS13B-202ENST00000357162 WFDC10AQ9H1F0 79 aa4.78□□□□□ -1.64
VPS13B-202ENST00000357162 LINC01547P58512 204 aaPredicted RBP4.78□□□□□ -1.64
VPS13B-202ENST00000357162 KLK9Q2XQG4 91 aa4.78□□□□□ -1.64
VPS13B-202ENST00000357162 Q6YL49 198 aa4.78□□□□□ -1.64
VPS13B-202ENST00000357162 DEFB104AQ8WTQ1 72 aa4.78□□□□□ -1.64
VPS13B-202ENST00000357162 C1orf158Q8N1D5 194 aa4.78□□□□□ -1.64
VPS13B-202ENST00000357162 LINC00959A0A1B0GUT2 108 aa4.78□□□□□ -1.64
VPS13B-202ENST00000357162 ADORA2A-AS1P86434 159 aa4.78□□□□□ -1.64
VPS13B-202ENST00000357162 C1orf137Q5JT78 98 aa4.77□□□□□ -1.65
VPS13B-202ENST00000357162 URB1-AS1Q96HZ7 61 aa4.77□□□□□ -1.65
VPS13B-202ENST00000357162 Q6ZSV7 163 aa4.77□□□□□ -1.65
VPS13B-202ENST00000357162 CEP350Q5VT06 3117 aa4.77□□□□□ -1.65
VPS13B-202ENST00000357162 Q6ZS46 218 aa4.77□□□□□ -1.65
VPS13B-202ENST00000357162 LINC00575Q6W349 94 aa4.76□□□□□ -1.65
VPS13B-202ENST00000357162 KLKP1Q107X0 134 aa4.76□□□□□ -1.65
VPS13B-202ENST00000357162 ELOF1P60002 83 aaKnown RBP4.76□□□□□ -1.65
VPS13B-202ENST00000357162 C10orf25Q5T742 122 aa4.76□□□□□ -1.65
VPS13B-202ENST00000357162 SNURFQ9Y675 71 aa4.76□□□□□ -1.65
VPS13B-202ENST00000357162 COL4A2P08572 1712 aa4.76□□□□□ -1.65
VPS13B-202ENST00000357162 DEFB135Q30KP9 77 aa4.76□□□□□ -1.65
VPS13B-202ENST00000357162 C11orf21Q9P2W6 132 aa4.76□□□□□ -1.65
VPS13B-202ENST00000357162 WFDC11Q8NEX6 87 aa4.75□□□□□ -1.65
VPS13B-202ENST00000357162 PDZD2O15018 2839 aa4.75□□□□□ -1.65
VPS13B-202ENST00000357162 KPRPQ5T749 579 aaPredicted RBP4.75□□□□□ -1.65
VPS13B-202ENST00000357162 IGHV4-30-2A0A087WSY4 118 aa4.75□□□□□ -1.65
VPS13B-202ENST00000357162 SPRNQ5BIV9 151 aa4.75□□□□□ -1.65
VPS13B-202ENST00000357162 C11orf45Q8TAV5 145 aa4.75□□□□□ -1.65
VPS13B-202ENST00000357162 DEFB136Q30KP8 78 aa4.75□□□□□ -1.65
VPS13B-202ENST00000357162 LINC01600Q96MT4 127 aa4.75□□□□□ -1.65
VPS13B-202ENST00000357162 RETNQ9HD89 108 aa4.75□□□□□ -1.65
VPS13B-202ENST00000357162 TRAV10A0A0B4J240 114 aa4.75□□□□□ -1.65
VPS13B-202ENST00000357162 WIPF1O43516 503 aa4.75□□□□□ -1.65
VPS13B-202ENST00000357162 MSMPQ1L6U9 139 aa4.74□□□□□ -1.65
VPS13B-202ENST00000357162 Q6ZVQ6 151 aa4.74□□□□□ -1.65
VPS13B-202ENST00000357162 CYSRT1A8MQ03 144 aa4.74□□□□□ -1.65
VPS13B-202ENST00000357162 CEMP1Q6PRD7 247 aaPredicted RBP4.74□□□□□ -1.65
VPS13B-202ENST00000357162 F8W735 103 aaPredicted RBP4.74□□□□□ -1.65
VPS13B-202ENST00000357162 WFDC10BQ8IUB3 73 aa4.74□□□□□ -1.65
VPS13B-202ENST00000357162 LINC00846Q9NV44 126 aa4.74□□□□□ -1.65
VPS13B-202ENST00000357162 C7orf33Q8WU49 177 aa4.73□□□□□ -1.65
VPS13B-202ENST00000357162 ADAMTSL4-AS1Q5T5F5 129 aa4.73□□□□□ -1.65
VPS13B-202ENST00000357162 DNAJC9-AS1A6NH13 148 aa4.72□□□□□ -1.65
VPS13B-202ENST00000357162 C11orf71Q6IPW1 123 aa4.72□□□□□ -1.65
VPS13B-202ENST00000357162 C11orf72Q8NBR9 251 aa4.72□□□□□ -1.65
VPS13B-202ENST00000357162 PRB4P10163 310 aaPredicted RBP4.72□□□□□ -1.65
VPS13B-202ENST00000357162 TSPEAR-AS2P59090 65 aa4.72□□□□□ -1.65
VPS13B-202ENST00000357162 KIF25-AS1Q9Y6Z4 181 aa4.72□□□□□ -1.65
VPS13B-202ENST00000357162 PRR9Q5T870 116 aa4.71□□□□□ -1.65
VPS13B-202ENST00000357162 IGHV3OR16-9A0A0B4J2B5 98 aa4.71□□□□□ -1.66
VPS13B-202ENST00000357162 RPL37AP61513 92 aaKnown RBP4.71□□□□□ -1.66
VPS13B-202ENST00000357162 LINC00337Q8N6G1 96 aa4.71□□□□□ -1.66
VPS13B-202ENST00000357162 C3orf84H3BNL1 204 aa4.71□□□□□ -1.66
VPS13B-202ENST00000357162 FAM19A1Q7Z5A9 133 aa4.71□□□□□ -1.66
VPS13B-202ENST00000357162 J3QKU1 62 aa4.71□□□□□ -1.66
VPS13B-202ENST00000357162 C8orf87E5RJ46 101 aa4.71□□□□□ -1.66
VPS13B-202ENST00000357162 C1orf229Q6ZS94 237 aaPredicted RBP4.71□□□□□ -1.66
VPS13B-202ENST00000357162 ATP11AUNQ6ZP68 121 aa4.7□□□□□ -1.66
VPS13B-202ENST00000357162 Q8NA96 180 aa4.7□□□□□ -1.66
VPS13B-202ENST00000357162 A0A096LPF7 62 aa4.7□□□□□ -1.66
VPS13B-202ENST00000357162 SLPIP03973 132 aa4.7□□□□□ -1.66
VPS13B-202ENST00000357162 H3BNG1 76 aa4.7□□□□□ -1.66
VPS13B-202ENST00000357162 CD164Q04900 197 aa4.7□□□□□ -1.66
VPS13B-202ENST00000357162 REG3GQ6UW15 175 aa4.7□□□□□ -1.66
VPS13B-202ENST00000357162 PRM2P04554 102 aa4.7□□□□□ -1.66
VPS13B-202ENST00000357162 ZANQ9Y493 2812 aa4.69□□□□□ -1.66
VPS13B-202ENST00000357162 A8MZ25 164 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms