RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 SH2D6Q7Z4S9 175 aa9.45□□□□□ -0.9
LSS-201ENST00000356396 MIR7-3HGQ8N6C7 128 aa9.44□□□□□ -0.9
LSS-201ENST00000356396 SCGB1C2P0DMR2 95 aa9.43□□□□□ -0.9
LSS-201ENST00000356396 WFDC2Q14508 124 aa9.43□□□□□ -0.9
LSS-201ENST00000356396 GAGE12HA6NDE8 117 aa9.43□□□□□ -0.9
LSS-201ENST00000356396 CASC10Q5T4H9 136 aa9.43□□□□□ -0.9
LSS-201ENST00000356396 ZFAND6Q6FIF0 208 aa9.43□□□□□ -0.9
LSS-201ENST00000356396 K7ERU9 68 aa9.42□□□□□ -0.9
LSS-201ENST00000356396 FABP2P12104 132 aa9.42□□□□□ -0.9
LSS-201ENST00000356396 ENHOQ6UWT2 76 aa9.42□□□□□ -0.9
LSS-201ENST00000356396 COX7B2Q8TF08 81 aa9.42□□□□□ -0.9
LSS-201ENST00000356396 KMT2AQ03164 3969 aa9.42□□□□□ -0.9
LSS-201ENST00000356396 MALP21145 153 aa9.42□□□□□ -0.9
LSS-201ENST00000356396 FUSP35637 526 aaKnown RBP eCLIP9.42□□□□□ -0.96e-7■■■□□ 18.3
LSS-201ENST00000356396 CLEC2BQ92478 149 aa9.42□□□□□ -0.9
LSS-201ENST00000356396 TIRAPP58753 221 aa9.41□□□□□ -0.9
LSS-201ENST00000356396 UNQ6190/PRO20217Q6UXQ8 127 aa9.41□□□□□ -0.9
LSS-201ENST00000356396 RPL24P83731 157 aaKnown RBP9.4□□□□□ -0.9
LSS-201ENST00000356396 IGLV5-39A0A0G2JS06 123 aa9.39□□□□□ -0.91
LSS-201ENST00000356396 SS18Q15532 418 aa9.39□□□□□ -0.91
LSS-201ENST00000356396 XAGE1AQ9HD64 81 aa9.39□□□□□ -0.91
LSS-201ENST00000356396 CSDC2Q9Y534 153 aaKnown RBP9.39□□□□□ -0.91
LSS-201ENST00000356396 IGKV2D-24A0A075B6R9 120 aa9.39□□□□□ -0.91
LSS-201ENST00000356396 IGLV5-45A0A087WSX0 123 aa9.39□□□□□ -0.91
LSS-201ENST00000356396 TMEM238C9JI98 176 aa9.39□□□□□ -0.91
LSS-201ENST00000356396 ETDBQ3ZM63 59 aa9.38□□□□□ -0.91
LSS-201ENST00000356396 TCL1BO95988 128 aa9.38□□□□□ -0.91
LSS-201ENST00000356396 LINC00308Q8TCZ7 52 aa9.38□□□□□ -0.91
LSS-201ENST00000356396 K7EP34 96 aa9.37□□□□□ -0.91
LSS-201ENST00000356396 Q8NDZ9 215 aa9.37□□□□□ -0.91
LSS-201ENST00000356396 NDUFA1O15239 70 aa9.36□□□□□ -0.91
LSS-201ENST00000356396 PRO1854Q9UHT4 67 aa9.36□□□□□ -0.91
LSS-201ENST00000356396 RPL13AP40429 203 aaKnown RBP9.36□□□□□ -0.91
LSS-201ENST00000356396 DNAH1Q9P2D7 4330 aa9.36□□□□□ -0.91
LSS-201ENST00000356396 MIAQ16674 131 aa9.36□□□□□ -0.91
LSS-201ENST00000356396 LELP1Q5T871 98 aa9.36□□□□□ -0.91
LSS-201ENST00000356396 A0A087WZ39 114 aa9.35□□□□□ -0.91
LSS-201ENST00000356396 CRPP02741 224 aa9.35□□□□□ -0.91
LSS-201ENST00000356396 GTF2H5Q6ZYL4 71 aa9.35□□□□□ -0.91
LSS-201ENST00000356396 OR13C6PQ8NH95 151 aa9.35□□□□□ -0.91
LSS-201ENST00000356396 TRIAP1O43715 76 aa9.35□□□□□ -0.91
LSS-201ENST00000356396 CKS1BP61024 79 aa9.35□□□□□ -0.91
LSS-201ENST00000356396 COX7A2LO14548 114 aa9.34□□□□□ -0.91
LSS-201ENST00000356396 LINC01620Q4KN68 170 aa9.34□□□□□ -0.91
LSS-201ENST00000356396 LINC00588Q9Y4M8 146 aa9.34□□□□□ -0.91
LSS-201ENST00000356396 SPATA25Q9BR10 227 aa9.33□□□□□ -0.92
LSS-201ENST00000356396 FOXI1Q12951 378 aa9.33□□□□□ -0.92
LSS-201ENST00000356396 ERG28Q9UKR5 140 aa9.33□□□□□ -0.92
LSS-201ENST00000356396 M0R2N4 97 aa9.33□□□□□ -0.92
LSS-201ENST00000356396 A0A1B0GUV1 79 aa9.32□□□□□ -0.92
LSS-201ENST00000356396 CCL18P55774 89 aa9.32□□□□□ -0.92
LSS-201ENST00000356396 TAL2Q16559 108 aa9.32□□□□□ -0.92
LSS-201ENST00000356396 NCR3O14931 201 aa9.32□□□□□ -0.92
LSS-201ENST00000356396 LINC00337Q8N6G1 96 aa9.32□□□□□ -0.92
LSS-201ENST00000356396 TM2D3Q9BRN9 247 aa9.32□□□□□ -0.92
LSS-201ENST00000356396 SPANXB1Q9NS25 103 aaPredicted RBP9.32□□□□□ -0.92
LSS-201ENST00000356396 TEX48A0A1B0GUV7 120 aa9.31□□□□□ -0.92
LSS-201ENST00000356396 SPAG11BQ08648 103 aa9.31□□□□□ -0.92
LSS-201ENST00000356396 GAGE2EQ4V326 116 aa9.31□□□□□ -0.92
LSS-201ENST00000356396 GAGE2DQ9UEU5 116 aa9.31□□□□□ -0.92
LSS-201ENST00000356396 CIRBPQ14011 172 aaKnown RBP9.3□□□□□ -0.92
LSS-201ENST00000356396 SMCPP49901 116 aaPredicted RBP9.3□□□□□ -0.92
LSS-201ENST00000356396 KIAA0087Q14695 138 aa9.3□□□□□ -0.92
LSS-201ENST00000356396 SND1-IT1Q9HBX3 110 aa9.3□□□□□ -0.92
LSS-201ENST00000356396 CD164L2Q6UWJ8 174 aa9.3□□□□□ -0.92
LSS-201ENST00000356396 IGKV2-28A0A075B6P5 120 aa9.29□□□□□ -0.92
LSS-201ENST00000356396 C9JAW5 83 aa9.29□□□□□ -0.92
LSS-201ENST00000356396 IGKV2D-28P01615 120 aa9.29□□□□□ -0.92
LSS-201ENST00000356396 KRTAP1-5Q9BYS1 174 aa9.29□□□□□ -0.92
LSS-201ENST00000356396 A0A1B0GWB2 263 aa9.29□□□□□ -0.92
LSS-201ENST00000356396 H7C423 109 aa9.27□□□□□ -0.93
LSS-201ENST00000356396 SLPIP03973 132 aa9.27□□□□□ -0.93
LSS-201ENST00000356396 FAM218AQ96MZ4 157 aa9.26□□□□□ -0.93
LSS-201ENST00000356396 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.25□□□□□ -0.93
LSS-201ENST00000356396 SPANXDQ9BXN6 97 aa9.25□□□□□ -0.93
LSS-201ENST00000356396 SPANXCQ9NY87 97 aa9.25□□□□□ -0.93
LSS-201ENST00000356396 SMAGPQ0VAQ4 97 aa9.24□□□□□ -0.93
LSS-201ENST00000356396 Q6ZRU5 148 aa9.24□□□□□ -0.93
LSS-201ENST00000356396 TRAV10A0A0B4J240 114 aa9.24□□□□□ -0.93
LSS-201ENST00000356396 C1orf43Q9BWL3 253 aa9.24□□□□□ -0.93
LSS-201ENST00000356396 FAM19A3Q7Z5A8 133 aa9.23□□□□□ -0.93
LSS-201ENST00000356396 C6orf48Q9UBA6 75 aa9.23□□□□□ -0.93
LSS-201ENST00000356396 TRAV8-4A0A0B4J246 113 aa9.22□□□□□ -0.93
LSS-201ENST00000356396 ZNF561-AS1K7EIQ3 104 aa9.22□□□□□ -0.93
LSS-201ENST00000356396 RPL18AQ02543 176 aaKnown RBP9.22□□□□□ -0.93
LSS-201ENST00000356396 PRR34Q9NV39 138 aa9.22□□□□□ -0.93
LSS-201ENST00000356396 KLK5Q9Y337 293 aaPredicted RBP9.22□□□□□ -0.93
LSS-201ENST00000356396 CAMK2N2Q96S95 79 aa9.22□□□□□ -0.93
LSS-201ENST00000356396 C15orf56Q8N910 161 aa9.21□□□□□ -0.94
LSS-201ENST00000356396 PRO0461Q9UI25 63 aa9.21□□□□□ -0.94
LSS-201ENST00000356396 UBE2DNLQ8IWF7 75 aa9.21□□□□□ -0.94
LSS-201ENST00000356396 SMIM11BQ8TCY0 68 aa9.2□□□□□ -0.94
LSS-201ENST00000356396 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.2□□□□□ -0.94
LSS-201ENST00000356396 Q8IZM0 81 aa9.2□□□□□ -0.94
LSS-201ENST00000356396 A0A0B4J2C4 111 aa9.19□□□□□ -0.94
LSS-201ENST00000356396 TEX49A0A1B0GTD5 131 aa9.19□□□□□ -0.94
LSS-201ENST00000356396 FAM168BA1KXE4 195 aa9.19□□□□□ -0.94
LSS-201ENST00000356396 A0A087WYN8 130 aa9.19□□□□□ -0.94
LSS-201ENST00000356396 VPS13DQ5THJ4 4388 aa9.19□□□□□ -0.94
LSS-201ENST00000356396 KRTAP26-1Q6PEX3 210 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms