RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 DNAH6Q9C0G6 4158 aa10.33□□□□□ -0.76
CTSA-202ENST00000354880 SPANXB1Q9NS25 103 aaPredicted RBP10.33□□□□□ -0.76
CTSA-202ENST00000354880 ZNF561-AS1K7EIQ3 104 aa10.33□□□□□ -0.76
CTSA-202ENST00000354880 LY6G6CO95867 125 aa10.33□□□□□ -0.76
CTSA-202ENST00000354880 HINT1P49773 126 aaPredicted RBP10.33□□□□□ -0.76
CTSA-202ENST00000354880 CIRBPQ14011 172 aaKnown RBP10.33□□□□□ -0.76
CTSA-202ENST00000354880 TAL2Q16559 108 aa10.33□□□□□ -0.76
CTSA-202ENST00000354880 HIGD2BQ4VC39 106 aa10.33□□□□□ -0.76
CTSA-202ENST00000354880 MEIG1Q5JSS6 88 aa10.33□□□□□ -0.76
CTSA-202ENST00000354880 C6orf223Q8N319 242 aa10.33□□□□□ -0.76
CTSA-202ENST00000354880 LINC00526Q96FQ7 95 aa10.33□□□□□ -0.76
CTSA-202ENST00000354880 LITAFQ99732 161 aa10.33□□□□□ -0.76
CTSA-202ENST00000354880 TIMM17BO60830 172 aa10.32□□□□□ -0.76
CTSA-202ENST00000354880 LINC00476Q8WZB0 136 aa10.32□□□□□ -0.76
CTSA-202ENST00000354880 M0R143 59 aa10.31□□□□□ -0.76
CTSA-202ENST00000354880 M0R2N4 97 aa10.31□□□□□ -0.76
CTSA-202ENST00000354880 NTN5Q8WTR8 489 aaPredicted RBP10.31□□□□□ -0.76
CTSA-202ENST00000354880 DNAH2Q9P225 4427 aa10.31□□□□□ -0.76
CTSA-202ENST00000354880 GVQW2A0A096LPI5 108 aaPredicted RBP10.3□□□□□ -0.76
CTSA-202ENST00000354880 PSCAO43653 123 aa10.3□□□□□ -0.76
CTSA-202ENST00000354880 SNHG12Q9BXW3 62 aa10.3□□□□□ -0.76
CTSA-202ENST00000354880 USP17L23D6RBM5 183 aa10.3□□□□□ -0.76
CTSA-202ENST00000354880 SMIM13P0DJ93 91 aa10.3□□□□□ -0.76
CTSA-202ENST00000354880 GCSHP23434 173 aa10.3□□□□□ -0.76
CTSA-202ENST00000354880 BATFQ16520 125 aa10.3□□□□□ -0.76
CTSA-202ENST00000354880 BVES-AS1Q5T3Y7 98 aa10.3□□□□□ -0.76
CTSA-202ENST00000354880 ADAMTSL4-AS1Q5T5F5 129 aa10.3□□□□□ -0.76
CTSA-202ENST00000354880 CEND1Q8N111 149 aa10.3□□□□□ -0.76
CTSA-202ENST00000354880 A0A0U1RRA0 63 aa10.29□□□□□ -0.76
CTSA-202ENST00000354880 SPANXDQ9BXN6 97 aa10.29□□□□□ -0.76
CTSA-202ENST00000354880 SPANXCQ9NY87 97 aa10.29□□□□□ -0.76
CTSA-202ENST00000354880 UNQ6190/PRO20217Q6UXQ8 127 aa10.28□□□□□ -0.76
CTSA-202ENST00000354880 Q6ZVH6 145 aa10.28□□□□□ -0.76
CTSA-202ENST00000354880 C2orf48Q96LS8 159 aa10.28□□□□□ -0.76
CTSA-202ENST00000354880 EREGO14944 169 aa10.28□□□□□ -0.76
CTSA-202ENST00000354880 C10orf25Q5T742 122 aa10.28□□□□□ -0.76
CTSA-202ENST00000354880 Q6ZR54 194 aa10.28□□□□□ -0.76
CTSA-202ENST00000354880 DAND5Q8N907 189 aa10.28□□□□□ -0.76
CTSA-202ENST00000354880 CAMK2N2Q96S95 79 aa10.28□□□□□ -0.76
CTSA-202ENST00000354880 ERG28Q9UKR5 140 aa10.28□□□□□ -0.76
CTSA-202ENST00000354880 LINC00158P58513 81 aa10.27□□□□□ -0.77
CTSA-202ENST00000354880 LECT2O14960 151 aa10.26□□□□□ -0.77
CTSA-202ENST00000354880 PFN2P35080 140 aa10.26□□□□□ -0.77
CTSA-202ENST00000354880 FXYD2P54710 66 aa10.26□□□□□ -0.77
CTSA-202ENST00000354880 F8WDY8 70 aa10.26□□□□□ -0.77
CTSA-202ENST00000354880 PTTG1IPP53801 180 aa10.26□□□□□ -0.77
CTSA-202ENST00000354880 Q6ZRN7 208 aaPredicted RBP10.26□□□□□ -0.77
CTSA-202ENST00000354880 COX17Q14061 63 aa10.25□□□□□ -0.77
CTSA-202ENST00000354880 C9orf116Q5BN46 136 aaPredicted RBP10.25□□□□□ -0.77
CTSA-202ENST00000354880 MUSTN1Q8IVN3 82 aa10.25□□□□□ -0.77
CTSA-202ENST00000354880 Q6ZRU5 148 aa10.24□□□□□ -0.77
CTSA-202ENST00000354880 MIR7-3HGQ8N6C7 128 aa10.24□□□□□ -0.77
CTSA-202ENST00000354880 C6orf48Q9UBA6 75 aa10.24□□□□□ -0.77
CTSA-202ENST00000354880 TRBV30A0A0K0K1B3 111 aa10.23□□□□□ -0.77
CTSA-202ENST00000354880 IFITM1P13164 125 aa10.23□□□□□ -0.77
CTSA-202ENST00000354880 NPC2P61916 151 aa10.23□□□□□ -0.77
CTSA-202ENST00000354880 WFDC2Q14508 124 aa10.23□□□□□ -0.77
CTSA-202ENST00000354880 SACSQ9NZJ4 4579 aa10.23□□□□□ -0.77
CTSA-202ENST00000354880 SYCNQ0VAF6 134 aa10.23□□□□□ -0.77
CTSA-202ENST00000354880 TMEM238LA0A1B0GVL6 79 aa10.22□□□□□ -0.77
CTSA-202ENST00000354880 A6NJY4 79 aa10.22□□□□□ -0.77
CTSA-202ENST00000354880 RPL24P83731 157 aaKnown RBP10.22□□□□□ -0.77
CTSA-202ENST00000354880 LINC00308Q8TCZ7 52 aa10.22□□□□□ -0.77
CTSA-202ENST00000354880 A6NDN8 102 aa10.21□□□□□ -0.77
CTSA-202ENST00000354880 COPS9Q8WXC6 57 aa10.21□□□□□ -0.77
CTSA-202ENST00000354880 EIF4EBP3O60516 100 aaPredicted RBP10.21□□□□□ -0.78
CTSA-202ENST00000354880 HYDINQ4G0P3 5121 aa10.2□□□□□ -0.78
CTSA-202ENST00000354880 LRCOL1A6NCL2 159 aa10.2□□□□□ -0.78
CTSA-202ENST00000354880 SLPIP03973 132 aa10.2□□□□□ -0.78
CTSA-202ENST00000354880 C14orf177Q52M58 125 aa10.2□□□□□ -0.78
CTSA-202ENST00000354880 C1orf134Q5TEV5 83 aa10.2□□□□□ -0.78
CTSA-202ENST00000354880 CARD19Q96LW7 228 aa10.2□□□□□ -0.78
CTSA-202ENST00000354880 A4D1N5 150 aa10.19□□□□□ -0.78
CTSA-202ENST00000354880 LBHQ53QV2 105 aaPredicted RBP10.19□□□□□ -0.78
CTSA-202ENST00000354880 COL5A1-AS1Q5SY13 56 aa10.19□□□□□ -0.78
CTSA-202ENST00000354880 SOSTDC1Q6X4U4 206 aa10.19□□□□□ -0.78
CTSA-202ENST00000354880 NHP2Q9NX24 153 aaKnown RBP10.19□□□□□ -0.78
CTSA-202ENST00000354880 DNAH17Q9UFH2 4485 aa10.19□□□□□ -0.78
CTSA-202ENST00000354880 PPDPFQ9H3Y8 114 aa10.18□□□□□ -0.78
CTSA-202ENST00000354880 FRAS1Q86XX4 4008 aa10.18□□□□□ -0.78
CTSA-202ENST00000354880 RNF151Q2KHN1 245 aa10.17□□□□□ -0.78
CTSA-202ENST00000354880 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.16□□□□□ -0.78
CTSA-202ENST00000354880 A0A1B0GWB2 263 aa10.16□□□□□ -0.78
CTSA-202ENST00000354880 NDUFC2-KCTD14E9PQ53 114 aa10.16□□□□□ -0.78
CTSA-202ENST00000354880 SND1-IT1Q9HBX3 110 aa10.16□□□□□ -0.78
CTSA-202ENST00000354880 K7ERJ3 54 aa10.15□□□□□ -0.78
CTSA-202ENST00000354880 CFC1BP0CG36 223 aa10.15□□□□□ -0.78
CTSA-202ENST00000354880 CFC1P0CG37 223 aa10.15□□□□□ -0.78
CTSA-202ENST00000354880 CNBPP62633 177 aaKnown RBP10.15□□□□□ -0.78
CTSA-202ENST00000354880 LOC107984156A0A0G2JMH3 177 aa10.14□□□□□ -0.79
CTSA-202ENST00000354880 ARL17AQ8IVW1 177 aa10.14□□□□□ -0.79
CTSA-202ENST00000354880 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.14□□□□□ -0.79
CTSA-202ENST00000354880 HECTD4Q9Y4D8 3996 aa10.14□□□□□ -0.79
CTSA-202ENST00000354880 A0A087WTM6 91 aa10.13□□□□□ -0.79
CTSA-202ENST00000354880 A0A0B4J2C4 111 aa10.12□□□□□ -0.79
CTSA-202ENST00000354880 TLX1NBP0CAT3 122 aa10.12□□□□□ -0.79
CTSA-202ENST00000354880 Q6ZRP5 223 aa10.12□□□□□ -0.79
CTSA-202ENST00000354880 Q8N814 137 aa10.12□□□□□ -0.79
CTSA-202ENST00000354880 RAB37Q96AX2 223 aa10.12□□□□□ -0.79
CTSA-202ENST00000354880 TAX1BP3O14907 124 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms