RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 TRAV10A0A0B4J240 114 aa7.66□□□□□ -1.18
SVIP-201ENST00000354193 TGP01266 2768 aa7.66□□□□□ -1.18
SVIP-201ENST00000354193 LYRM7Q5U5X0 104 aa7.66□□□□□ -1.18
SVIP-201ENST00000354193 TM2D2Q9BX73 214 aa7.66□□□□□ -1.18
SVIP-201ENST00000354193 C6orf223Q8N319 242 aa7.65□□□□□ -1.18
SVIP-201ENST00000354193 XAGE1AQ9HD64 81 aa7.65□□□□□ -1.18
SVIP-201ENST00000354193 CAMK2N2Q96S95 79 aa7.65□□□□□ -1.18
SVIP-201ENST00000354193 EGFEM1PQ0D2K5 195 aa7.65□□□□□ -1.19
SVIP-201ENST00000354193 SND1-IT1Q9HBX3 110 aa7.65□□□□□ -1.19
SVIP-201ENST00000354193 CFC1BP0CG36 223 aa7.64□□□□□ -1.19
SVIP-201ENST00000354193 CFC1P0CG37 223 aa7.64□□□□□ -1.19
SVIP-201ENST00000354193 FAM104AQ969W3 186 aa7.64□□□□□ -1.19
SVIP-201ENST00000354193 CSDC2Q9Y534 153 aaKnown RBP7.64□□□□□ -1.19
SVIP-201ENST00000354193 M0R2N4 97 aa7.64□□□□□ -1.19
SVIP-201ENST00000354193 ETDBQ3ZM63 59 aa7.64□□□□□ -1.19
SVIP-201ENST00000354193 H7C423 109 aa7.64□□□□□ -1.19
SVIP-201ENST00000354193 C9JAW5 83 aa7.63□□□□□ -1.19
SVIP-201ENST00000354193 S100A7L2Q5SY68 101 aa7.63□□□□□ -1.19
SVIP-201ENST00000354193 IGHV3OR16-9A0A0B4J2B5 98 aa7.63□□□□□ -1.19
SVIP-201ENST00000354193 MIAQ16674 131 aa7.62□□□□□ -1.19
SVIP-201ENST00000354193 CD164L2Q6UWJ8 174 aa7.62□□□□□ -1.19
SVIP-201ENST00000354193 UNQ6190/PRO20217Q6UXQ8 127 aa7.62□□□□□ -1.19
SVIP-201ENST00000354193 NDUFA1O15239 70 aa7.62□□□□□ -1.19
SVIP-201ENST00000354193 EIF4EBP3O60516 100 aaPredicted RBP7.62□□□□□ -1.19
SVIP-201ENST00000354193 TSPAN13O95857 204 aa7.62□□□□□ -1.19
SVIP-201ENST00000354193 PRR3P79522 188 aaKnown RBP7.62□□□□□ -1.19
SVIP-201ENST00000354193 LINC00612Q8N6U2 182 aa7.62□□□□□ -1.19
SVIP-201ENST00000354193 LINC00308Q8TCZ7 52 aa7.62□□□□□ -1.19
SVIP-201ENST00000354193 COPS9Q8WXC6 57 aa7.61□□□□□ -1.19
SVIP-201ENST00000354193 K7EP34 96 aa7.61□□□□□ -1.19
SVIP-201ENST00000354193 CLEC2BQ92478 149 aa7.61□□□□□ -1.19
SVIP-201ENST00000354193 A0A087WZ39 114 aa7.6□□□□□ -1.19
SVIP-201ENST00000354193 HERV-K104P63124 156 aa7.6□□□□□ -1.19
SVIP-201ENST00000354193 NCR3O14931 201 aa7.6□□□□□ -1.19
SVIP-201ENST00000354193 WFDC2Q14508 124 aa7.6□□□□□ -1.19
SVIP-201ENST00000354193 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.6□□□□□ -1.19
SVIP-201ENST00000354193 A0A1B0GUV1 79 aa7.6□□□□□ -1.19
SVIP-201ENST00000354193 WIPF1O43516 503 aa7.6□□□□□ -1.19
SVIP-201ENST00000354193 DNAL4O96015 105 aa7.59□□□□□ -1.19
SVIP-201ENST00000354193 RPL18AQ02543 176 aaKnown RBP7.59□□□□□ -1.2
SVIP-201ENST00000354193 SPANXB1Q9NS25 103 aaPredicted RBP7.57□□□□□ -1.2
SVIP-201ENST00000354193 K7ERU9 68 aa7.57□□□□□ -1.2
SVIP-201ENST00000354193 C10orf25Q5T742 122 aa7.56□□□□□ -1.2
SVIP-201ENST00000354193 IFITM1P13164 125 aa7.56□□□□□ -1.2
SVIP-201ENST00000354193 GAGE2BQ13066 116 aa7.56□□□□□ -1.2
SVIP-201ENST00000354193 ENHOQ6UWT2 76 aa7.56□□□□□ -1.2
SVIP-201ENST00000354193 IGKV2-24A0A0C4DH68 120 aa7.56□□□□□ -1.2
SVIP-201ENST00000354193 IGLV5-39A0A0G2JS06 123 aa7.56□□□□□ -1.2
SVIP-201ENST00000354193 TCL1BO95988 128 aa7.56□□□□□ -1.2
SVIP-201ENST00000354193 LURAP1LQ8IV03 231 aa7.55□□□□□ -1.2
SVIP-201ENST00000354193 J3QR89 54 aa7.55□□□□□ -1.2
SVIP-201ENST00000354193 TRIAP1O43715 76 aa7.55□□□□□ -1.2
SVIP-201ENST00000354193 SOSTDC1Q6X4U4 206 aa7.55□□□□□ -1.2
SVIP-201ENST00000354193 LINC00588Q9Y4M8 146 aa7.55□□□□□ -1.2
SVIP-201ENST00000354193 KLK5Q9Y337 293 aaPredicted RBP7.54□□□□□ -1.2
SVIP-201ENST00000354193 IGLV5-45A0A087WSX0 123 aa7.54□□□□□ -1.2
SVIP-201ENST00000354193 C15orf53Q8NAA6 179 aa7.54□□□□□ -1.2
SVIP-201ENST00000354193 TM2D3Q9BRN9 247 aa7.53□□□□□ -1.2
SVIP-201ENST00000354193 IBA57-AS1B1ANH7 110 aa7.53□□□□□ -1.2
SVIP-201ENST00000354193 ATXN8Q156A1 80 aa7.53□□□□□ -1.2
SVIP-201ENST00000354193 TRAV8-4A0A0B4J246 113 aa7.52□□□□□ -1.21
SVIP-201ENST00000354193 Q8IZM0 81 aa7.52□□□□□ -1.21
SVIP-201ENST00000354193 SPANXCQ9NY87 97 aa7.52□□□□□ -1.21
SVIP-201ENST00000354193 TRAV13-2A0A0B4J235 113 aa7.51□□□□□ -1.21
SVIP-201ENST00000354193 SLC25A20O43772 301 aa7.51□□□□□ -1.21
SVIP-201ENST00000354193 SPANXDQ9BXN6 97 aa7.51□□□□□ -1.21
SVIP-201ENST00000354193 SNCGO76070 127 aa7.5□□□□□ -1.21
SVIP-201ENST00000354193 FOXI1Q12951 378 aa7.5□□□□□ -1.21
SVIP-201ENST00000354193 LITAFQ99732 161 aa7.5□□□□□ -1.21
SVIP-201ENST00000354193 A0A0B4J2C4 111 aa7.5□□□□□ -1.21
SVIP-201ENST00000354193 OCIAD2Q56VL3 154 aa7.5□□□□□ -1.21
SVIP-201ENST00000354193 CARD19Q96LW7 228 aa7.5□□□□□ -1.21
SVIP-201ENST00000354193 NTN5Q8WTR8 489 aaPredicted RBP7.5□□□□□ -1.21
SVIP-201ENST00000354193 RMI2Q96E14 147 aa7.5□□□□□ -1.21
SVIP-201ENST00000354193 NKAPP1Q8N9T2 125 aa7.5□□□□□ -1.21
SVIP-201ENST00000354193 TRBV20-1A0A075B6N2 111 aa7.49□□□□□ -1.21
SVIP-201ENST00000354193 SLPIP03973 132 aa7.49□□□□□ -1.21
SVIP-201ENST00000354193 CXCL5P42830 114 aa7.49□□□□□ -1.21
SVIP-201ENST00000354193 SYCNQ0VAF6 134 aa7.49□□□□□ -1.21
SVIP-201ENST00000354193 Q6ZRU5 148 aa7.49□□□□□ -1.21
SVIP-201ENST00000354193 LINC01620Q4KN68 170 aa7.49□□□□□ -1.21
SVIP-201ENST00000354193 USP17L23D6RBM5 183 aa7.48□□□□□ -1.21
SVIP-201ENST00000354193 B9D2Q9BPU9 175 aa7.48□□□□□ -1.21
SVIP-201ENST00000354193 LY6G6CO95867 125 aa7.48□□□□□ -1.21
SVIP-201ENST00000354193 LINC00337Q8N6G1 96 aa7.48□□□□□ -1.21
SVIP-201ENST00000354193 IGKV2-28A0A075B6P5 120 aa7.47□□□□□ -1.21
SVIP-201ENST00000354193 TIMM17BO60830 172 aa7.47□□□□□ -1.21
SVIP-201ENST00000354193 IGKV2D-28P01615 120 aa7.47□□□□□ -1.21
SVIP-201ENST00000354193 CASC10Q5T4H9 136 aa7.47□□□□□ -1.21
SVIP-201ENST00000354193 LINC01556Q5JQF7 62 aa7.47□□□□□ -1.21
SVIP-201ENST00000354193 SMIM11BQ8TCY0 68 aa7.46□□□□□ -1.22
SVIP-201ENST00000354193 F8W1H4 67 aa7.46□□□□□ -1.22
SVIP-201ENST00000354193 C21orf62-AS1Q17RA5 79 aa7.46□□□□□ -1.22
SVIP-201ENST00000354193 C6orf99Q4VX62 202 aa7.46□□□□□ -1.22
SVIP-201ENST00000354193 H3BNG1 76 aa7.45□□□□□ -1.22
SVIP-201ENST00000354193 FAM19A5Q7Z5A7 132 aaPredicted RBP7.45□□□□□ -1.22
SVIP-201ENST00000354193 FUSP35637 526 aaKnown RBP eCLIP7.44□□□□□ -1.22
SVIP-201ENST00000354193 C6orf48Q9UBA6 75 aa7.44□□□□□ -1.22
SVIP-201ENST00000354193 RPL37AP8A6NKH3 93 aa7.44□□□□□ -1.22
SVIP-201ENST00000354193 ANKRD29Q8N6D5 301 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms