RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 C2orf82Q6UX34 121 aa10.66□□□□□ -0.7
MBD1-205ENST00000353909 PFN2P35080 140 aa10.66□□□□□ -0.7
MBD1-205ENST00000353909 CKS1BP61024 79 aa10.66□□□□□ -0.7
MBD1-205ENST00000353909 GAGE12HA6NDE8 117 aa10.66□□□□□ -0.7
MBD1-205ENST00000353909 SLC25A20O43772 301 aa10.65□□□□□ -0.7
MBD1-205ENST00000353909 LINC00158P58513 81 aa10.65□□□□□ -0.7
MBD1-205ENST00000353909 SHISA2Q6UWI4 295 aa10.65□□□□□ -0.7
MBD1-205ENST00000353909 CARD19Q96LW7 228 aa10.65□□□□□ -0.7
MBD1-205ENST00000353909 FOXI1Q12951 378 aa10.65□□□□□ -0.71
MBD1-205ENST00000353909 MRPL23Q16540 153 aaKnown RBP10.65□□□□□ -0.71
MBD1-205ENST00000353909 REG3AQ06141 175 aa10.64□□□□□ -0.71
MBD1-205ENST00000353909 C6orf226Q5I0X4 101 aa10.64□□□□□ -0.71
MBD1-205ENST00000353909 LINC01620Q4KN68 170 aa10.64□□□□□ -0.71
MBD1-205ENST00000353909 ANKRD29Q8N6D5 301 aa10.64□□□□□ -0.71
MBD1-205ENST00000353909 MGAM2Q2M2H8 2515 aa10.64□□□□□ -0.71
MBD1-205ENST00000353909 EGFEM1PQ0D2K5 195 aa10.63□□□□□ -0.71
MBD1-205ENST00000353909 ATXN8Q156A1 80 aa10.63□□□□□ -0.71
MBD1-205ENST00000353909 CHCHD10Q8WYQ3 142 aaPredicted RBP10.63□□□□□ -0.71
MBD1-205ENST00000353909 TEN1Q86WV5 123 aa10.63□□□□□ -0.71
MBD1-205ENST00000353909 CFAP161Q6P656 301 aa10.62□□□□□ -0.71
MBD1-205ENST00000353909 IGKV2-28A0A075B6P5 120 aa10.61□□□□□ -0.71
MBD1-205ENST00000353909 IGKV2D-28P01615 120 aa10.61□□□□□ -0.71
MBD1-205ENST00000353909 Q6ZTC4 211 aa10.61□□□□□ -0.71
MBD1-205ENST00000353909 DNAH3Q8TD57 4116 aa10.61□□□□□ -0.71
MBD1-205ENST00000353909 CCL18P55774 89 aa10.61□□□□□ -0.71
MBD1-205ENST00000353909 LINC00337Q8N6G1 96 aa10.61□□□□□ -0.71
MBD1-205ENST00000353909 COX6CP09669 75 aa10.6□□□□□ -0.71
MBD1-205ENST00000353909 LELP1Q5T871 98 aa10.6□□□□□ -0.71
MBD1-205ENST00000353909 CD164L2Q6UWJ8 174 aa10.6□□□□□ -0.71
MBD1-205ENST00000353909 SND1-IT1Q9HBX3 110 aa10.6□□□□□ -0.71
MBD1-205ENST00000353909 PRB2P02812 416 aaPredicted RBP10.6□□□□□ -0.71
MBD1-205ENST00000353909 SPATA25Q9BR10 227 aa10.6□□□□□ -0.71
MBD1-205ENST00000353909 IBA57-AS1B1ANH7 110 aa10.59□□□□□ -0.71
MBD1-205ENST00000353909 LYPD5Q6UWN5 251 aa10.59□□□□□ -0.71
MBD1-205ENST00000353909 KLK12Q9UKR0 248 aa10.59□□□□□ -0.71
MBD1-205ENST00000353909 J3QR89 54 aa10.59□□□□□ -0.71
MBD1-205ENST00000353909 KIAA0087Q14695 138 aa10.59□□□□□ -0.71
MBD1-205ENST00000353909 COPS9Q8WXC6 57 aa10.59□□□□□ -0.71
MBD1-205ENST00000353909 COX7A2LO14548 114 aa10.58□□□□□ -0.72
MBD1-205ENST00000353909 Q8IZM0 81 aa10.58□□□□□ -0.72
MBD1-205ENST00000353909 LST1O00453 97 aa10.58□□□□□ -0.72
MBD1-205ENST00000353909 LINC00526Q96FQ7 95 aa10.58□□□□□ -0.72
MBD1-205ENST00000353909 C9orf116Q5BN46 136 aaPredicted RBP10.57□□□□□ -0.72
MBD1-205ENST00000353909 PPDPFLQ8WWR9 84 aa10.57□□□□□ -0.72
MBD1-205ENST00000353909 KPRPQ5T749 579 aaPredicted RBP10.57□□□□□ -0.72
MBD1-205ENST00000353909 NTN5Q8WTR8 489 aaPredicted RBP10.57□□□□□ -0.72
MBD1-205ENST00000353909 A0A0J9YWU9 116 aa10.56□□□□□ -0.72
MBD1-205ENST00000353909 TRBV10-2A0A0K0K1G8 114 aa10.56□□□□□ -0.72
MBD1-205ENST00000353909 TEX49A0A1B0GTD5 131 aa10.55□□□□□ -0.72
MBD1-205ENST00000353909 MALP21145 153 aa10.55□□□□□ -0.72
MBD1-205ENST00000353909 ENHOQ6UWT2 76 aa10.55□□□□□ -0.72
MBD1-205ENST00000353909 WFDC10BQ8IUB3 73 aa10.55□□□□□ -0.72
MBD1-205ENST00000353909 NANOS2P60321 138 aaKnown RBP10.55□□□□□ -0.72
MBD1-205ENST00000353909 C6orf223Q8N319 242 aa10.55□□□□□ -0.72
MBD1-205ENST00000353909 FAM218AQ96MZ4 157 aa10.54□□□□□ -0.72
MBD1-205ENST00000353909 CRPP02741 224 aa10.53□□□□□ -0.72
MBD1-205ENST00000353909 PRR34Q9NV39 138 aa10.53□□□□□ -0.72
MBD1-205ENST00000353909 PRR3P79522 188 aaKnown RBP10.53□□□□□ -0.72
MBD1-205ENST00000353909 PPDPFQ9H3Y8 114 aa10.53□□□□□ -0.72
MBD1-205ENST00000353909 C10orf25Q5T742 122 aa10.53□□□□□ -0.72
MBD1-205ENST00000353909 TRAV13-2A0A0B4J235 113 aa10.52□□□□□ -0.73
MBD1-205ENST00000353909 LINC01561Q8N1V8 128 aa10.52□□□□□ -0.73
MBD1-205ENST00000353909 UBE2WQ96B02 151 aa10.52□□□□□ -0.73
MBD1-205ENST00000353909 CDIP1Q9H305 208 aa10.52□□□□□ -0.73
MBD1-205ENST00000353909 M0QXV9 152 aa10.51□□□□□ -0.73
MBD1-205ENST00000353909 SMIM11BQ8TCY0 68 aa10.51□□□□□ -0.73
MBD1-205ENST00000353909 TRAV8-4A0A0B4J246 113 aa10.5□□□□□ -0.73
MBD1-205ENST00000353909 ESRGQ1W209 222 aa10.5□□□□□ -0.73
MBD1-205ENST00000353909 UNQ6190/PRO20217Q6UXQ8 127 aa10.5□□□□□ -0.73
MBD1-205ENST00000353909 RPL28P46779 137 aaKnown RBP10.49□□□□□ -0.73
MBD1-205ENST00000353909 LINC01600Q96MT4 127 aa10.49□□□□□ -0.73
MBD1-205ENST00000353909 Q8NDZ9 215 aa10.48□□□□□ -0.73
MBD1-205ENST00000353909 OR13C6PQ8NH95 151 aa10.48□□□□□ -0.73
MBD1-205ENST00000353909 SPAG11BQ08648 103 aa10.48□□□□□ -0.73
MBD1-205ENST00000353909 C11orf45Q8TAV5 145 aa10.48□□□□□ -0.73
MBD1-205ENST00000353909 COL7A1Q02388 2944 aa10.47□□□□□ -0.73
MBD1-205ENST00000353909 DEFB131BA0A096LNP1 70 aa10.47□□□□□ -0.73
MBD1-205ENST00000353909 H3BT86 120 aa10.47□□□□□ -0.73
MBD1-205ENST00000353909 STAB2Q8WWQ8 2551 aa10.47□□□□□ -0.73
MBD1-205ENST00000353909 MRAPQ8TCY5 172 aa10.47□□□□□ -0.73
MBD1-205ENST00000353909 Q9HAA7 133 aa10.47□□□□□ -0.73
MBD1-205ENST00000353909 SS18L2Q9UHA2 77 aa10.47□□□□□ -0.73
MBD1-205ENST00000353909 HUWE1Q7Z6Z7 4374 aaKnown RBP10.46□□□□□ -0.73
MBD1-205ENST00000353909 H3BNG1 76 aa10.46□□□□□ -0.73
MBD1-205ENST00000353909 KLK5Q9Y337 293 aaPredicted RBP10.46□□□□□ -0.74
MBD1-205ENST00000353909 CXCL5P42830 114 aa10.45□□□□□ -0.74
MBD1-205ENST00000353909 A0A087WYN8 130 aa10.44□□□□□ -0.74
MBD1-205ENST00000353909 XGP55808 180 aa10.44□□□□□ -0.74
MBD1-205ENST00000353909 MT-ATP8P03928 68 aa10.43□□□□□ -0.74
MBD1-205ENST00000353909 C22orf24Q9Y442 160 aa10.43□□□□□ -0.74
MBD1-205ENST00000353909 COX17Q14061 63 aa10.43□□□□□ -0.74
MBD1-205ENST00000353909 K7EIL1 84 aa10.42□□□□□ -0.74
MBD1-205ENST00000353909 TRACP01848 142 aa10.42□□□□□ -0.74
MBD1-205ENST00000353909 HIGD2BQ4VC39 106 aa10.42□□□□□ -0.74
MBD1-205ENST00000353909 DEFB121Q5J5C9 76 aa10.42□□□□□ -0.74
MBD1-205ENST00000353909 KRTAP26-1Q6PEX3 210 aa10.42□□□□□ -0.74
MBD1-205ENST00000353909 BAALC-AS2P0C853 105 aa10.4□□□□□ -0.74
MBD1-205ENST00000353909 NCR3O14931 201 aa10.4□□□□□ -0.74
MBD1-205ENST00000353909 C6orf48Q9UBA6 75 aa10.39□□□□□ -0.75
MBD1-205ENST00000353909 LECT2O14960 151 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms