RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 NUPR2A6NF83 97 aa9.7□□□□□ -0.86
SMC6-201ENST00000351948 B9D2Q9BPU9 175 aa9.7□□□□□ -0.86
SMC6-201ENST00000351948 RBM3P98179 157 aaKnown RBP9.7□□□□□ -0.86
SMC6-201ENST00000351948 CITED1Q99966 193 aa9.7□□□□□ -0.86
SMC6-201ENST00000351948 SPANXDQ9BXN6 97 aa9.69□□□□□ -0.86
SMC6-201ENST00000351948 LYPD5Q6UWN5 251 aa9.69□□□□□ -0.86
SMC6-201ENST00000351948 SBSPONQ8IVN8 264 aa9.69□□□□□ -0.86
SMC6-201ENST00000351948 SPTBN5Q9NRC6 3674 aaKnown RBP9.69□□□□□ -0.86
SMC6-201ENST00000351948 SMIM1B2RUZ4 78 aa9.69□□□□□ -0.86
SMC6-201ENST00000351948 TEX15Q9BXT5 2789 aa9.69□□□□□ -0.86
SMC6-201ENST00000351948 NREPQ16612 68 aa9.69□□□□□ -0.86
SMC6-201ENST00000351948 KIF25-AS1Q9Y6Z4 181 aa9.68□□□□□ -0.86
SMC6-201ENST00000351948 TSPEAR-AS2P59090 65 aa9.68□□□□□ -0.86
SMC6-201ENST00000351948 C4orf48Q5BLP8 95 aa9.68□□□□□ -0.86
SMC6-201ENST00000351948 C6orf223Q8N319 242 aa9.68□□□□□ -0.86
SMC6-201ENST00000351948 SPANXB1Q9NS25 103 aaPredicted RBP9.68□□□□□ -0.86
SMC6-201ENST00000351948 PRR3P79522 188 aaKnown RBP9.68□□□□□ -0.86
SMC6-201ENST00000351948 TNRC18O15417 2968 aaPredicted RBP9.67□□□□□ -0.86
SMC6-201ENST00000351948 TMEM256-PLSCR3K7ERE1 68 aa9.67□□□□□ -0.86
SMC6-201ENST00000351948 STAB1Q9NY15 2570 aa9.66□□□□□ -0.86
SMC6-201ENST00000351948 ATMQ13315 3056 aa9.66□□□□□ -0.86
SMC6-201ENST00000351948 Q8IZM0 81 aa9.66□□□□□ -0.86
SMC6-201ENST00000351948 DMXL2Q8TDJ6 3036 aa9.65□□□□□ -0.86
SMC6-201ENST00000351948 TRAV23DV6A0A075B6W5 121 aa9.65□□□□□ -0.86
SMC6-201ENST00000351948 USP17L23D6RBM5 183 aa9.65□□□□□ -0.86
SMC6-201ENST00000351948 TEX49A0A1B0GTD5 131 aa9.65□□□□□ -0.86
SMC6-201ENST00000351948 FAM19A4Q96LR4 140 aa9.65□□□□□ -0.87
SMC6-201ENST00000351948 JMJD7-PLA2G4BH0Y9G9 81 aa9.64□□□□□ -0.87
SMC6-201ENST00000351948 H3BT86 120 aa9.64□□□□□ -0.87
SMC6-201ENST00000351948 X6R8D5 127 aa9.64□□□□□ -0.87
SMC6-201ENST00000351948 KRTAP1-3Q8IUG1 177 aa9.64□□□□□ -0.87
SMC6-201ENST00000351948 REV3LO60673 3130 aa9.63□□□□□ -0.87
SMC6-201ENST00000351948 LINC00315P59091 139 aa9.63□□□□□ -0.87
SMC6-201ENST00000351948 UNC79Q9P2D8 2635 aa9.63□□□□□ -0.87
SMC6-201ENST00000351948 LOC107984640A0A0U1RRK4 108 aa9.62□□□□□ -0.87
SMC6-201ENST00000351948 Q6ZQY7 126 aa9.62□□□□□ -0.87
SMC6-201ENST00000351948 FLNCQ14315 2725 aa9.62□□□□□ -0.87
SMC6-201ENST00000351948 SMIM11BQ8TCY0 68 aa9.62□□□□□ -0.87
SMC6-201ENST00000351948 AMELXQ99217 191 aa9.62□□□□□ -0.87
SMC6-201ENST00000351948 NTM-AS1Q6ZSK4 140 aa9.62□□□□□ -0.87
SMC6-201ENST00000351948 COL6A5A8TX70 2615 aa9.62□□□□□ -0.87
SMC6-201ENST00000351948 ADAMTSL4-AS1Q5T5F5 129 aa9.61□□□□□ -0.87
SMC6-201ENST00000351948 H0Y9J4 135 aa9.6□□□□□ -0.87
SMC6-201ENST00000351948 Q8N3U1 123 aa9.6□□□□□ -0.87
SMC6-201ENST00000351948 C7orf33Q8WU49 177 aa9.6□□□□□ -0.87
SMC6-201ENST00000351948 M0R378 163 aa9.6□□□□□ -0.87
SMC6-201ENST00000351948 TIMM17BO60830 172 aa9.6□□□□□ -0.87
SMC6-201ENST00000351948 COL12A1Q99715 3063 aa9.6□□□□□ -0.87
SMC6-201ENST00000351948 ESRGQ1W209 222 aa9.59□□□□□ -0.87
SMC6-201ENST00000351948 SCXQ7RTU7 201 aa9.59□□□□□ -0.87
SMC6-201ENST00000351948 NDUFB1O75438 58 aa9.59□□□□□ -0.87
SMC6-201ENST00000351948 KRTAP10-3P60369 221 aa9.59□□□□□ -0.87
SMC6-201ENST00000351948 CSDC2Q9Y534 153 aaKnown RBP9.58□□□□□ -0.88
SMC6-201ENST00000351948 ACYP1P07311 99 aa9.58□□□□□ -0.88
SMC6-201ENST00000351948 HRCT1Q6UXD1 115 aa9.57□□□□□ -0.88
SMC6-201ENST00000351948 ZNF73O43830 326 aaPredicted RBP9.57□□□□□ -0.88
SMC6-201ENST00000351948 TRBV30A0A0K0K1B3 111 aa9.57□□□□□ -0.88
SMC6-201ENST00000351948 A0A1B0GUV1 79 aa9.57□□□□□ -0.88
SMC6-201ENST00000351948 M0QXV9 152 aa9.56□□□□□ -0.88
SMC6-201ENST00000351948 BAHCC1Q9P281 2608 aa9.56□□□□□ -0.88
SMC6-201ENST00000351948 GCN1Q92616 2671 aaKnown RBP9.56□□□□□ -0.88
SMC6-201ENST00000351948 C3orf84H3BNL1 204 aa9.56□□□□□ -0.88
SMC6-201ENST00000351948 TRBV10-3A0A0K0K1G6 114 aa9.55□□□□□ -0.88
SMC6-201ENST00000351948 EGFEM1PQ0D2K5 195 aa9.55□□□□□ -0.88
SMC6-201ENST00000351948 KRTAP1-1Q07627 177 aa9.55□□□□□ -0.88
SMC6-201ENST00000351948 MDFIQ99750 246 aa9.55□□□□□ -0.88
SMC6-201ENST00000351948 PLAC8L1A1L4L8 177 aa9.55□□□□□ -0.88
SMC6-201ENST00000351948 COX17Q14061 63 aa9.54□□□□□ -0.88
SMC6-201ENST00000351948 TACC2O95359 2948 aa9.54□□□□□ -0.88
SMC6-201ENST00000351948 IGLV5-52A0A0A0MRZ9 124 aa9.54□□□□□ -0.88
SMC6-201ENST00000351948 NHLRC4P0CG21 123 aaPredicted RBP9.54□□□□□ -0.88
SMC6-201ENST00000351948 FAM236AA0A1B0GUQ0 79 aa9.54□□□□□ -0.88
SMC6-201ENST00000351948 FAM236BA0A1B0GV22 79 aa9.54□□□□□ -0.88
SMC6-201ENST00000351948 Q8NAQ8 132 aa9.53□□□□□ -0.88
SMC6-201ENST00000351948 ADGRG4Q8IZF6 3080 aa9.53□□□□□ -0.88
SMC6-201ENST00000351948 IGLV9-49A0A0B4J1Y8 123 aa9.53□□□□□ -0.88
SMC6-201ENST00000351948 H3BQ85 93 aa9.53□□□□□ -0.88
SMC6-201ENST00000351948 CCKP06307 115 aa9.53□□□□□ -0.88
SMC6-201ENST00000351948 Q6ZRU5 148 aa9.53□□□□□ -0.88
SMC6-201ENST00000351948 WFDC9Q8NEX5 89 aa9.53□□□□□ -0.88
SMC6-201ENST00000351948 C1orf134Q5TEV5 83 aa9.53□□□□□ -0.88
SMC6-201ENST00000351948 KLK9Q2XQG4 91 aa9.52□□□□□ -0.89
SMC6-201ENST00000351948 SPINK6Q6UWN8 80 aa9.52□□□□□ -0.89
SMC6-201ENST00000351948 NOTCH1P46531 2555 aa9.52□□□□□ -0.89
SMC6-201ENST00000351948 A8MTW9 85 aa9.52□□□□□ -0.89
SMC6-201ENST00000351948 KRTAP10-11P60412 298 aa9.52□□□□□ -0.89
SMC6-201ENST00000351948 ZZEF1O43149 2961 aa9.51□□□□□ -0.89
SMC6-201ENST00000351948 A0A1B0GX51 115 aa9.51□□□□□ -0.89
SMC6-201ENST00000351948 BPY2O14599 106 aa9.51□□□□□ -0.89
SMC6-201ENST00000351948 DMXL1Q9Y485 3027 aa9.5□□□□□ -0.89
SMC6-201ENST00000351948 NBEAQ8NFP9 2946 aa9.5□□□□□ -0.89
SMC6-201ENST00000351948 LST1O00453 97 aa9.49□□□□□ -0.89
SMC6-201ENST00000351948 SDIM1Q6ZPB5 146 aa9.49□□□□□ -0.89
SMC6-201ENST00000351948 UBR5O95071 2799 aaPredicted RBP9.49□□□□□ -0.89
SMC6-201ENST00000351948 NDUFC2-KCTD14E9PQ53 114 aa9.49□□□□□ -0.89
SMC6-201ENST00000351948 PDE6GP18545 87 aa9.48□□□□□ -0.89
SMC6-201ENST00000351948 IGHV3OR16-9A0A0B4J2B5 98 aa9.47□□□□□ -0.89
SMC6-201ENST00000351948 LINC00474Q9P2X8 69 aa9.47□□□□□ -0.89
SMC6-201ENST00000351948 MYO15AQ9UKN7 3530 aa9.47□□□□□ -0.89
SMC6-201ENST00000351948 DHRS4-AS1Q9P1J3 65 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms