RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 PFN2P35080 140 aa11.55□□□□□ -0.56
PDAP1-201ENST00000350498 COX7B2Q8TF08 81 aa11.55□□□□□ -0.56
PDAP1-201ENST00000350498 DEFB135Q30KP9 77 aa11.54□□□□□ -0.56
PDAP1-201ENST00000350498 Q6Q795 121 aa11.54□□□□□ -0.56
PDAP1-201ENST00000350498 LINC00158P58513 81 aa11.54□□□□□ -0.56
PDAP1-201ENST00000350498 SND1-IT1Q9HBX3 110 aa11.53□□□□□ -0.56
PDAP1-201ENST00000350498 A0A087WYN8 130 aa11.53□□□□□ -0.56
PDAP1-201ENST00000350498 FAM240AA0A1B0GVK7 77 aa11.53□□□□□ -0.56
PDAP1-201ENST00000350498 ATP5G1P05496 136 aa11.53□□□□□ -0.56
PDAP1-201ENST00000350498 HERV-K104P63124 156 aa11.52□□□□□ -0.56
PDAP1-201ENST00000350498 FAM222AQ5U5X8 452 aa11.52□□□□□ -0.57
PDAP1-201ENST00000350498 PKD1L1Q8TDX9 2849 aa11.51□□□□□ -0.57
PDAP1-201ENST00000350498 IGHV3OR16-9A0A0B4J2B5 98 aa11.51□□□□□ -0.57
PDAP1-201ENST00000350498 CRPP02741 224 aa11.51□□□□□ -0.57
PDAP1-201ENST00000350498 CCL18P55774 89 aa11.51□□□□□ -0.57
PDAP1-201ENST00000350498 SMIM11BQ8TCY0 68 aa11.51□□□□□ -0.57
PDAP1-201ENST00000350498 XCL1P47992 114 aa11.5□□□□□ -0.57
PDAP1-201ENST00000350498 TRACP01848 142 aa11.49□□□□□ -0.57
PDAP1-201ENST00000350498 FAM236AA0A1B0GUQ0 79 aa11.49□□□□□ -0.57
PDAP1-201ENST00000350498 FAM236BA0A1B0GV22 79 aa11.49□□□□□ -0.57
PDAP1-201ENST00000350498 GAGE2AQ6NT46 116 aa11.48□□□□□ -0.57
PDAP1-201ENST00000350498 LINC00959A0A1B0GUT2 108 aa11.47□□□□□ -0.57
PDAP1-201ENST00000350498 SLPIP03973 132 aa11.47□□□□□ -0.57
PDAP1-201ENST00000350498 RPL28P46779 137 aaKnown RBP11.47□□□□□ -0.57
PDAP1-201ENST00000350498 KIR2DL5BQ8NHK3 375 aa11.47□□□□□ -0.57
PDAP1-201ENST00000350498 COPS9Q8WXC6 57 aa11.47□□□□□ -0.57
PDAP1-201ENST00000350498 CELA1Q9UNI1 258 aa11.47□□□□□ -0.57
PDAP1-201ENST00000350498 TRBV7-7A0A0K0K1E9 115 aa11.47□□□□□ -0.57
PDAP1-201ENST00000350498 LINC00612Q8N6U2 182 aa11.47□□□□□ -0.57
PDAP1-201ENST00000350498 TRAV13-2A0A0B4J235 113 aa11.46□□□□□ -0.58
PDAP1-201ENST00000350498 MALP21145 153 aa11.46□□□□□ -0.58
PDAP1-201ENST00000350498 ANK2Q01484 3957 aa11.45□□□□□ -0.58
PDAP1-201ENST00000350498 IGLV10-54A0A075B6I4 117 aa11.45□□□□□ -0.58
PDAP1-201ENST00000350498 PRR3P79522 188 aaKnown RBP11.45□□□□□ -0.58
PDAP1-201ENST00000350498 MRPL23Q16540 153 aaKnown RBP11.45□□□□□ -0.58
PDAP1-201ENST00000350498 OR13C6PQ8NH95 151 aa11.45□□□□□ -0.58
PDAP1-201ENST00000350498 PAX4O43316 350 aa11.45□□□□□ -0.58
PDAP1-201ENST00000350498 C14orf132Q9NPU4 83 aa11.44□□□□□ -0.58
PDAP1-201ENST00000350498 IGHV4-28A0A0C4DH34 117 aa11.44□□□□□ -0.58
PDAP1-201ENST00000350498 FLNBO75369 2602 aaKnown RBP11.44□□□□□ -0.58
PDAP1-201ENST00000350498 A0A087WZ39 114 aa11.43□□□□□ -0.58
PDAP1-201ENST00000350498 LECT2O14960 151 aa11.43□□□□□ -0.58
PDAP1-201ENST00000350498 PRO0255Q9UI72 69 aa11.43□□□□□ -0.58
PDAP1-201ENST00000350498 HTN3P15516 51 aa11.42□□□□□ -0.58
PDAP1-201ENST00000350498 C6orf226Q5I0X4 101 aa11.42□□□□□ -0.58
PDAP1-201ENST00000350498 LINC00269Q8N2A0 174 aa11.42□□□□□ -0.58
PDAP1-201ENST00000350498 C9orf66Q5T8R8 295 aa11.41□□□□□ -0.58
PDAP1-201ENST00000350498 DNAL4O96015 105 aa11.41□□□□□ -0.58
PDAP1-201ENST00000350498 NCR3O14931 201 aa11.4□□□□□ -0.58
PDAP1-201ENST00000350498 ACYP1P07311 99 aa11.4□□□□□ -0.58
PDAP1-201ENST00000350498 STAB1Q9NY15 2570 aa11.4□□□□□ -0.58
PDAP1-201ENST00000350498 F8P00451 2351 aa11.4□□□□□ -0.58
PDAP1-201ENST00000350498 LINC00643Q86TS7 51 aa11.4□□□□□ -0.59
PDAP1-201ENST00000350498 FBN1P35555 2871 aaKnown RBP11.39□□□□□ -0.59
PDAP1-201ENST00000350498 IBA57-AS1B1ANH7 110 aa11.39□□□□□ -0.59
PDAP1-201ENST00000350498 TENM3Q9P273 2699 aa11.38□□□□□ -0.59
PDAP1-201ENST00000350498 SDIM1Q6ZPB5 146 aa11.38□□□□□ -0.59
PDAP1-201ENST00000350498 C9orf116Q5BN46 136 aaPredicted RBP11.37□□□□□ -0.59
PDAP1-201ENST00000350498 SMIM20Q8N5G0 67 aa11.37□□□□□ -0.59
PDAP1-201ENST00000350498 LINC00526Q96FQ7 95 aa11.37□□□□□ -0.59
PDAP1-201ENST00000350498 DAD1P61803 113 aa11.36□□□□□ -0.59
PDAP1-201ENST00000350498 Q8NAQ8 132 aa11.36□□□□□ -0.59
PDAP1-201ENST00000350498 IGKV3D-7A0A0C4DH55 119 aa11.36□□□□□ -0.59
PDAP1-201ENST00000350498 ANGP03950 147 aaKnown RBP11.36□□□□□ -0.59
PDAP1-201ENST00000350498 SMIM9A6NGZ8 99 aa11.35□□□□□ -0.59
PDAP1-201ENST00000350498 INAFM2P0DMQ5 153 aa11.35□□□□□ -0.59
PDAP1-201ENST00000350498 SS18Q15532 418 aa11.35□□□□□ -0.59
PDAP1-201ENST00000350498 LINC00846Q9NV44 126 aa11.35□□□□□ -0.59
PDAP1-201ENST00000350498 A0A1B0GUV1 79 aa11.34□□□□□ -0.59
PDAP1-201ENST00000350498 IGHV4-30-4P0DP06 118 aa11.34□□□□□ -0.59
PDAP1-201ENST00000350498 LYRM9A8MSI8 78 aa11.34□□□□□ -0.59
PDAP1-201ENST00000350498 Q8NDZ9 215 aa11.33□□□□□ -0.6
PDAP1-201ENST00000350498 PPDPFQ9H3Y8 114 aa11.33□□□□□ -0.6
PDAP1-201ENST00000350498 RETNQ9HD89 108 aa11.33□□□□□ -0.6
PDAP1-201ENST00000350498 OXLD1Q5BKU9 147 aa11.33□□□□□ -0.6
PDAP1-201ENST00000350498 NANOS2P60321 138 aaKnown RBP11.32□□□□□ -0.6
PDAP1-201ENST00000350498 CHCHD10Q8WYQ3 142 aaPredicted RBP11.32□□□□□ -0.6
PDAP1-201ENST00000350498 IMUPQ9GZP8 106 aa11.32□□□□□ -0.6
PDAP1-201ENST00000350498 A0A087WVE0 104 aa11.32□□□□□ -0.6
PDAP1-201ENST00000350498 REG3AQ06141 175 aa11.31□□□□□ -0.6
PDAP1-201ENST00000350498 C6orf223Q8N319 242 aa11.31□□□□□ -0.6
PDAP1-201ENST00000350498 H0YGX0 51 aa11.31□□□□□ -0.6
PDAP1-201ENST00000350498 APOC4P55056 127 aa11.31□□□□□ -0.6
PDAP1-201ENST00000350498 KIAA0087Q14695 138 aa11.3□□□□□ -0.6
PDAP1-201ENST00000350498 KLK5Q9Y337 293 aaPredicted RBP11.3□□□□□ -0.6
PDAP1-201ENST00000350498 NOTCH1P46531 2555 aa11.29□□□□□ -0.6
PDAP1-201ENST00000350498 CXCL5P42830 114 aa11.29□□□□□ -0.6
PDAP1-201ENST00000350498 Q8IZM0 81 aa11.28□□□□□ -0.6
PDAP1-201ENST00000350498 MAST4O15021 2626 aa11.28□□□□□ -0.6
PDAP1-201ENST00000350498 C10orf25Q5T742 122 aa11.28□□□□□ -0.6
PDAP1-201ENST00000350498 CMYA5Q8N3K9 4069 aa11.27□□□□□ -0.6
PDAP1-201ENST00000350498 C9orf153Q5TBE3 101 aa11.27□□□□□ -0.61
PDAP1-201ENST00000350498 OBSCN-AS1Q96MR7 158 aa11.27□□□□□ -0.61
PDAP1-201ENST00000350498 CD164L2Q6UWJ8 174 aa11.26□□□□□ -0.61
PDAP1-201ENST00000350498 KLK12Q9UKR0 248 aa11.26□□□□□ -0.61
PDAP1-201ENST00000350498 CYSTM1Q9H1C7 97 aa11.26□□□□□ -0.61
PDAP1-201ENST00000350498 KRTAP10-11P60412 298 aa11.25□□□□□ -0.61
PDAP1-201ENST00000350498 C3orf22Q8N5N4 141 aa11.25□□□□□ -0.61
PDAP1-201ENST00000350498 ORMDL1Q9P0S3 153 aa11.25□□□□□ -0.61
PDAP1-201ENST00000350498 SPART-AS1P0CW21 52 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms