RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 BRWD1Q9NSI6 2320 aa4.12□□□□□ -1.75
RFC1-201ENST00000349703 TRBV10-1A0A0K0K1A3 114 aa4.11□□□□□ -1.75
RFC1-201ENST00000349703 LINC00315P59091 139 aa4.11□□□□□ -1.75
RFC1-201ENST00000349703 FAM19A4Q96LR4 140 aa4.11□□□□□ -1.75
RFC1-201ENST00000349703 ZGRF1Q86YA3 2104 aa4.11□□□□□ -1.75
RFC1-201ENST00000349703 IBA57-AS1B1ANH7 110 aa4.11□□□□□ -1.75
RFC1-201ENST00000349703 DEFB131AP59861 70 aa4.11□□□□□ -1.75
RFC1-201ENST00000349703 MOBPQ13875 183 aa4.11□□□□□ -1.75
RFC1-201ENST00000349703 KLK9Q2XQG4 91 aa4.11□□□□□ -1.75
RFC1-201ENST00000349703 LIMD2Q9BT23 127 aa4.11□□□□□ -1.75
RFC1-201ENST00000349703 SLPIP03973 132 aa4.11□□□□□ -1.75
RFC1-201ENST00000349703 ENHOQ6UWT2 76 aa4.11□□□□□ -1.75
RFC1-201ENST00000349703 TRBV7-6A0A0J9YX20 115 aa4.1□□□□□ -1.75
RFC1-201ENST00000349703 DEFB1P60022 68 aa4.1□□□□□ -1.75
RFC1-201ENST00000349703 ICE1Q9Y2F5 2266 aa4.1□□□□□ -1.75
RFC1-201ENST00000349703 BRI3O95415 125 aa4.1□□□□□ -1.75
RFC1-201ENST00000349703 ATP11AUNQ6ZP68 121 aa4.1□□□□□ -1.75
RFC1-201ENST00000349703 HCG22E2RYF7 251 aa4.1□□□□□ -1.75
RFC1-201ENST00000349703 Q6ZR54 194 aa4.1□□□□□ -1.75
RFC1-201ENST00000349703 MALRD1Q5VYJ5 2156 aa4.09□□□□□ -1.75
RFC1-201ENST00000349703 SMCR5Q8TEV8 140 aa4.09□□□□□ -1.75
RFC1-201ENST00000349703 CADP27708 2225 aa4.09□□□□□ -1.75
RFC1-201ENST00000349703 FAM19A1Q7Z5A9 133 aa4.09□□□□□ -1.76
RFC1-201ENST00000349703 DEFB123Q8N688 67 aa4.09□□□□□ -1.76
RFC1-201ENST00000349703 SMIM11BQ8TCY0 68 aa4.09□□□□□ -1.76
RFC1-201ENST00000349703 ABCA1O95477 2261 aa4.09□□□□□ -1.76
RFC1-201ENST00000349703 ARFGEF3Q5TH69 2177 aa4.08□□□□□ -1.76
RFC1-201ENST00000349703 DSCAML1Q8TD84 2053 aa4.08□□□□□ -1.76
RFC1-201ENST00000349703 PCSK5Q92824 1860 aa4.08□□□□□ -1.76
RFC1-201ENST00000349703 F8WEM9 126 aa4.08□□□□□ -1.76
RFC1-201ENST00000349703 Q6ZQY7 126 aa4.08□□□□□ -1.76
RFC1-201ENST00000349703 A0A087WVE0 104 aa4.08□□□□□ -1.76
RFC1-201ENST00000349703 BPESC1Q9GZL8 116 aa4.08□□□□□ -1.76
RFC1-201ENST00000349703 LINC00846Q9NV44 126 aa4.08□□□□□ -1.76
RFC1-201ENST00000349703 PLXNB1O43157 2135 aa4.08□□□□□ -1.76
RFC1-201ENST00000349703 NDUFB1O75438 58 aa4.07□□□□□ -1.76
RFC1-201ENST00000349703 C1orf134Q5TEV5 83 aa4.07□□□□□ -1.76
RFC1-201ENST00000349703 FP248Q71RG6 208 aaPredicted RBP4.07□□□□□ -1.76
RFC1-201ENST00000349703 SMIM29Q86T20 159 aa4.07□□□□□ -1.76
RFC1-201ENST00000349703 C9orf116Q5BN46 136 aaPredicted RBP4.07□□□□□ -1.76
RFC1-201ENST00000349703 Q6ZTI0 123 aa4.07□□□□□ -1.76
RFC1-201ENST00000349703 CCL19Q99731 98 aa4.07□□□□□ -1.76
RFC1-201ENST00000349703 PRR15Q8IV56 129 aa4.07□□□□□ -1.76
RFC1-201ENST00000349703 A0A087WYN8 130 aa4.06□□□□□ -1.76
RFC1-201ENST00000349703 ZNF575Q86XF7 245 aa4.06□□□□□ -1.76
RFC1-201ENST00000349703 AKAP6Q13023 2319 aa4.06□□□□□ -1.76
RFC1-201ENST00000349703 M0R378 163 aa4.06□□□□□ -1.76
RFC1-201ENST00000349703 CASC10Q5T4H9 136 aa4.06□□□□□ -1.76
RFC1-201ENST00000349703 TPRP12270 2363 aaKnown RBP4.06□□□□□ -1.76
RFC1-201ENST00000349703 LRCOL1A6NCL2 159 aa4.05□□□□□ -1.76
RFC1-201ENST00000349703 FAM229BQ4G0N7 80 aa4.05□□□□□ -1.76
RFC1-201ENST00000349703 MIFP14174 115 aa4.05□□□□□ -1.76
RFC1-201ENST00000349703 B4DSR2 109 aa4.05□□□□□ -1.76
RFC1-201ENST00000349703 TRBV6-4A0A1B0GX49 114 aa4.05□□□□□ -1.76
RFC1-201ENST00000349703 CCL18P55774 89 aa4.04□□□□□ -1.76
RFC1-201ENST00000349703 DNAH10OSP0CZ25 163 aa4.04□□□□□ -1.76
RFC1-201ENST00000349703 RPL37AP61513 92 aaKnown RBP4.04□□□□□ -1.76
RFC1-201ENST00000349703 EGFEM1PQ0D2K5 195 aa4.04□□□□□ -1.76
RFC1-201ENST00000349703 Q8N814 137 aa4.04□□□□□ -1.76
RFC1-201ENST00000349703 CDC42SE2Q9NRR3 84 aa4.04□□□□□ -1.76
RFC1-201ENST00000349703 COX6A2Q02221 97 aa4.04□□□□□ -1.76
RFC1-201ENST00000349703 COX17Q14061 63 aa4.04□□□□□ -1.76
RFC1-201ENST00000349703 DMAC1Q96GE9 116 aa4.04□□□□□ -1.76
RFC1-201ENST00000349703 PLCE1Q9P212 2302 aa4.03□□□□□ -1.76
RFC1-201ENST00000349703 Q8N2B8 174 aa4.03□□□□□ -1.76
RFC1-201ENST00000349703 DNAH12Q6ZR08 3092 aa4.03□□□□□ -1.76
RFC1-201ENST00000349703 KRTAP25-1Q3LHN0 102 aa4.03□□□□□ -1.76
RFC1-201ENST00000349703 Q6ZQT0 140 aa4.03□□□□□ -1.76
RFC1-201ENST00000349703 A0A1B0GVX0 72 aa4.03□□□□□ -1.77
RFC1-201ENST00000349703 NREPQ16612 68 aa4.03□□□□□ -1.77
RFC1-201ENST00000349703 DIRC1Q969H9 104 aa4.03□□□□□ -1.77
RFC1-201ENST00000349703 LINC00337Q8N6G1 96 aa4.02□□□□□ -1.77
RFC1-201ENST00000349703 MIR22HGQ0VDD5 57 aa4.02□□□□□ -1.77
RFC1-201ENST00000349703 SSBP3-AS1Q7Z2R9 100 aa4.02□□□□□ -1.77
RFC1-201ENST00000349703 PRRC2AP48634 2157 aaKnown RBP4.01□□□□□ -1.77
RFC1-201ENST00000349703 NOP10Q9NPE3 64 aaKnown RBP4.01□□□□□ -1.77
RFC1-201ENST00000349703 PKDREJQ9NTG1 2253 aa4.01□□□□□ -1.77
RFC1-201ENST00000349703 RP1L1Q8IWN7 2480 aaPredicted RBP4.01□□□□□ -1.77
RFC1-201ENST00000349703 A0A1W2PPR1 153 aa4.01□□□□□ -1.77
RFC1-201ENST00000349703 NTM-AS1Q6ZSK4 140 aa4.01□□□□□ -1.77
RFC1-201ENST00000349703 NCOR1O75376 2440 aa4.01□□□□□ -1.77
RFC1-201ENST00000349703 CEP250Q9BV73 2442 aa4.01□□□□□ -1.77
RFC1-201ENST00000349703 LYPD5Q6UWN5 251 aa4.01□□□□□ -1.77
RFC1-201ENST00000349703 NOTCH2NLQ7Z3S9 236 aa4.01□□□□□ -1.77
RFC1-201ENST00000349703 Q8IZM0 81 aa4.01□□□□□ -1.77
RFC1-201ENST00000349703 Q8N1X5 172 aa4.01□□□□□ -1.77
RFC1-201ENST00000349703 A0A1B0GUV1 79 aa4□□□□□ -1.77
RFC1-201ENST00000349703 KLKP1Q107X0 134 aa4□□□□□ -1.77
RFC1-201ENST00000349703 KPRPQ5T749 579 aaPredicted RBP4□□□□□ -1.77
RFC1-201ENST00000349703 COX7BP24311 80 aa4□□□□□ -1.77
RFC1-201ENST00000349703 OBSCN-AS1Q96MR7 158 aa4□□□□□ -1.77
RFC1-201ENST00000349703 LOC110117498A0A087WWA1 95 aa4□□□□□ -1.77
RFC1-201ENST00000349703 CYP4F30PQ9H0H9 118 aa4□□□□□ -1.77
RFC1-201ENST00000349703 RTL8CO15255 209 aa3.99□□□□□ -1.77
RFC1-201ENST00000349703 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.99□□□□□ -1.77
RFC1-201ENST00000349703 ADM2Q7Z4H4 148 aa3.99□□□□□ -1.77
RFC1-201ENST00000349703 PCNTO95613 3336 aa3.99□□□□□ -1.77
RFC1-201ENST00000349703 MAP1BP46821 2468 aaKnown RBP3.99□□□□□ -1.77
RFC1-201ENST00000349703 ARHGAP32A7KAX9 2087 aa3.99□□□□□ -1.77
RFC1-201ENST00000349703 CENPFP49454 3210 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms